Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_B21
         (773 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.2  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   4.2  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          23   4.2  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          23   4.2  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          23   4.2  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          23   4.2  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          23   4.2  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    23   4.2  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   4.2  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          22   5.5  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   5.5  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 180  GARMTGGGFGGCAVALVQKSE 118
            G  ++GGG GGC    V +S+
Sbjct: 962  GQTVSGGGMGGCQPGGVVQSQ 982


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +1

Query: 67  YWLSFILRQNPLFQSIQFALLNQSHRT 147
           +W+SF+    P   S+Q+  LN + ++
Sbjct: 495 FWVSFVNNGVPNVNSVQWPRLNPNEKS 521


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -2

Query: 427 KYAGFRQAERSRL*RVSYQKSSACHRRNSEN 335
           KYA    + RSR    S+Q++S+CH R  ++
Sbjct: 209 KYAISSNSLRSR--SRSFQRTSSCHSRYEDS 237


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -2

Query: 427 KYAGFRQAERSRL*RVSYQKSSACHRRNSEN 335
           KYA    + RSR    S+Q++S+CH R  ++
Sbjct: 209 KYAISSNSLRSR--SRSFQRTSSCHSRYEDS 237


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -2

Query: 427 KYAGFRQAERSRL*RVSYQKSSACHRRNSEN 335
           KYA    + RSR    S+Q++S+CH R  ++
Sbjct: 209 KYAISSNSLRSR--SRSFQRTSSCHSRYEDS 237


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -2

Query: 427 KYAGFRQAERSRL*RVSYQKSSACHRRNSEN 335
           KYA    + RSR    S+Q++S+CH R  ++
Sbjct: 209 KYAISSNSLRSR--SRSFQRTSSCHSRYEDS 237


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -2

Query: 427 KYAGFRQAERSRL*RVSYQKSSACHRRNSEN 335
           KYA    + RSR    S+Q++S+CH R  ++
Sbjct: 209 KYAISSNSLRSR--SRSFQRTSSCHSRYEDS 237


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -2

Query: 427 KYAGFRQAERSRL*RVSYQKSSACHRRNSEN 335
           KYA    + RSR    S+Q++S+CH R  ++
Sbjct: 209 KYAISSNSLRSR--SRSFQRTSSCHSRYEDS 237


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +1

Query: 67  YWLSFILRQNPLFQSIQFALLNQSHRT 147
           +W+SF+    P   S+Q+  LN + ++
Sbjct: 495 FWVSFVNNGVPNVNSVQWPRLNPNEKS 521


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 427 KYAGFRQAERSRL*RVSYQKSSACHRR 347
           KYA    + RSR    S+Q++S+CH R
Sbjct: 209 KYAISSNSLRSR--SRSFQRTSSCHSR 233


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = -3

Query: 342 QRTVEAAS--KLTEKNYKRVGELFYQSHDSLSKLMEVSC 232
           QRT+   S  KLTE N K    + Y+ + +  +  EV C
Sbjct: 663 QRTLMVGSLGKLTETNPKLARSVLYKIYLNTMESHEVRC 701


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,353
Number of Sequences: 438
Number of extensions: 5144
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)