Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_B16
         (671 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.43 
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    24   0.99 
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    24   0.99 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.2  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.4 bits (53), Expect = 0.43
 Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
 Frame = +1

Query: 16  FFFFSTQCXFSLCLFNFSHGSNFGSCLF*FLG--FIFRNICLHYC 144
           F FF+    F LCL  F+    F  C++ F     IF    L YC
Sbjct: 186 FIFFNMHLLFLLCLDYFTLHLLFLPCIYYFYSAFIIFTIHLLFYC 230


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 24.2 bits (50), Expect = 0.99
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +3

Query: 420 LVISKTIFSILGETGLSTPSGTGIVRGVTVC 512
           LV+S  I+S+LG+     P   G     T C
Sbjct: 8   LVLSALIYSVLGQENFKCPDDFGFYPHHTSC 38


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 24.2 bits (50), Expect = 0.99
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +3

Query: 420 LVISKTIFSILGETGLSTPSGTGIVRGVTVC 512
           LV+S  I+S+LG+     P   G     T C
Sbjct: 8   LVLSALIYSVLGQENFKCPDDFGFYPHHTSC 38


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 242  KFRHFNCKTGLH 277
            K+  FNC  GLH
Sbjct: 1301 KYEVFNCAPGLH 1312


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,910
Number of Sequences: 336
Number of extensions: 2254
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)