Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_B16
         (671 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_1038 - 29879965-29880492                                         36   0.039
05_07_0157 - 28079181-28079720                                         33   0.27 
05_07_0049 - 27327804-27328400                                         33   0.27 
02_04_0534 + 23725051-23726253                                         29   3.4  
01_01_0323 + 2598850-2598924,2599756-2600844,2601352-2602589,260...    29   4.5  
06_01_1138 - 9429447-9433868                                           28   7.8  

>03_05_1038 - 29879965-29880492
          Length = 175

 Score = 35.5 bits (78), Expect = 0.039
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = -3

Query: 180 LVQAKKFVESVPTVVKADISKDEAEKLKEA*TKVGA 73
           L +AK+ VE  P V+KA + K+EAE + E    +GA
Sbjct: 135 LKEAKELVEKAPAVLKAGVPKEEAESIAEKMRAIGA 170


>05_07_0157 - 28079181-28079720
          Length = 179

 Score = 32.7 bits (71), Expect = 0.27
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = -3

Query: 195 LEGFNLVQAKKFVESVPTVVKADISKDEAEKLKEA*TKVGA 73
           L    L +AK  +E +P   K  +SK+EAE+ K+   +VGA
Sbjct: 134 LTNLALKEAKDLIEGLPKKAKEAVSKEEAEEAKKQLEEVGA 174


>05_07_0049 - 27327804-27328400
          Length = 198

 Score = 32.7 bits (71), Expect = 0.27
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = -3

Query: 180 LVQAKKFVESVPTVVKADISKDEAEKLKEA*TKVGA 73
           L +AK+ VE  P V+K  +SK+EA  + +    VGA
Sbjct: 158 LKEAKELVEKAPAVIKGGVSKEEARTIIDKMKAVGA 193


>02_04_0534 + 23725051-23726253
          Length = 400

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -2

Query: 508 TVTPLTIPVPEGVDKPVSPK 449
           TV   T+P+PEG D PV PK
Sbjct: 99  TVVQETLPLPEGGDHPVPPK 118


>01_01_0323 + 2598850-2598924,2599756-2600844,2601352-2602589,
            2602637-2602810,2603032-2603098,2603735-2603757,
            2603899-2604001,2604087-2604848,2605098-2605292,
            2605496-2606115,2606429-2606480,2606558-2607197,
            2608366-2608574,2608660-2609189,2609500-2609566,
            2609651-2609728,2610415-2610483,2610569-2610643
          Length = 2021

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +3

Query: 186  ILQEDPXTSLISATFCLSSNFVILT 260
            +L +DP +SL+S  FCL   F++ T
Sbjct: 1708 VLAQDPFSSLLSTLFCLPVQFLMST 1732


>06_01_1138 - 9429447-9433868
          Length = 1473

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -2

Query: 469  DKPVSPKIEKIVFEITNLNLLEVSELSQVLKK 374
            +K  +PK++KIV  +TN+N L   E    LK+
Sbjct: 1265 EKEAAPKLQKIVLSLTNVNSLSGVEGLPKLKE 1296


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,156,844
Number of Sequences: 37544
Number of extensions: 229403
Number of successful extensions: 548
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 548
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1703141568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)