Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_B14
         (477 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0701 - 23655762-23655857,23656067-23656141,23656245-236563...    29   2.6  

>06_03_0701 -
           23655762-23655857,23656067-23656141,23656245-23656301,
           23656385-23656501,23657286-23657405,23657491-23657613,
           23657967-23658056,23658184-23658309,23658809-23658901,
           23658947-23659021,23659115-23659222,23659481-23659552,
           23659673-23659735,23660850-23661017
          Length = 460

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 16/58 (27%), Positives = 25/58 (43%)
 Frame = -3

Query: 211 NILNMNIYLNSXXKIIVYLSLFRILNFFDKLFMQCKXXXXXXXFVCRQILKSFNMCRN 38
           NI+ +N  L    KI + L L      FDK+  Q K          +Q++ + N C +
Sbjct: 71  NIVRLNEVLAGKTKIYIILELITGGELFDKIARQGKLRENEARKYFQQLIDAINYCHS 128


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,214,372
Number of Sequences: 37544
Number of extensions: 125687
Number of successful extensions: 189
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 189
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 979080328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)