Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_B14
         (477 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302661-1|CAC35526.1|  128|Anopheles gambiae gSG8 protein protein.    24   2.4  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    22   9.6  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    22   9.6  

>AJ302661-1|CAC35526.1|  128|Anopheles gambiae gSG8 protein protein.
          Length = 128

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +1

Query: 400 SERNVVNKTTHNYIA 444
           SER+V+N+T  N+IA
Sbjct: 111 SERSVLNRTVRNFIA 125


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 8   SSPVILNLFXVAAHIK 55
           SSP+I+ L  +A HI+
Sbjct: 88  SSPIIIGLNPIATHIR 103


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 8   SSPVILNLFXVAAHIK 55
           SSP+I+ L  +A HI+
Sbjct: 88  SSPIIIGLNPIATHIR 103


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 412,345
Number of Sequences: 2352
Number of extensions: 6078
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 42095889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)