Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_B13
         (659 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC017166-1|AAH17166.1|  556|Homo sapiens glypican 4 protein.           31   4.8  
AY358507-1|AAQ88871.1|  556|Homo sapiens glypican 4 protein.           31   4.8  
AY052833-1|AAL11018.1|  556|Homo sapiens glypican-4 protein.           31   4.8  
AL109623-1|CAB86664.2|  556|Homo sapiens glypican 4 protein.           31   4.8  
AL034400-1|CAI42076.1|  556|Homo sapiens glypican 4 protein.           31   4.8  
AF064826-1|AAC31899.1|  556|Homo sapiens glypican 4 protein.           31   4.8  
AF030186-1|AAC69991.1|  556|Homo sapiens glypican-4 protein.           31   4.8  

>BC017166-1|AAH17166.1|  556|Homo sapiens glypican 4 protein.
          Length = 556

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 22/104 (21%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
 Frame = +3

Query: 243 IKVLIKFNTCYKNDMTFRLNICFKD-I*VKKSEICNYYVSFKANLLSNYNK*FKKVTNIH 419
           +K+  + +TC   +M  + ++  KD      SE CN+  +  A+    +++ FK++    
Sbjct: 57  LKICPQGSTCCSQEMEEKYSLQSKDDFKSVVSEQCNHLQAVFASRYKKFDEFFKELLENA 116

Query: 420 SQILSFIYLKKYFYINMQIFLNHNNKVRK*MY*QVYKNHKLGNL 551
            + L+ +++K Y ++ MQ     N+++ K ++ ++ + + +GN+
Sbjct: 117 EKSLNDMFVKTYGHLYMQ-----NSELFKDLFVELKRYYVVGNV 155


>AY358507-1|AAQ88871.1|  556|Homo sapiens glypican 4 protein.
          Length = 556

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 22/104 (21%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
 Frame = +3

Query: 243 IKVLIKFNTCYKNDMTFRLNICFKD-I*VKKSEICNYYVSFKANLLSNYNK*FKKVTNIH 419
           +K+  + +TC   +M  + ++  KD      SE CN+  +  A+    +++ FK++    
Sbjct: 57  LKICPQGSTCCSQEMEEKYSLQSKDDFKSVVSEQCNHLQAVFASRYKKFDEFFKELLENA 116

Query: 420 SQILSFIYLKKYFYINMQIFLNHNNKVRK*MY*QVYKNHKLGNL 551
            + L+ +++K Y ++ MQ     N+++ K ++ ++ + + +GN+
Sbjct: 117 EKSLNDMFVKTYGHLYMQ-----NSELFKDLFVELKRYYVVGNV 155


>AY052833-1|AAL11018.1|  556|Homo sapiens glypican-4 protein.
          Length = 556

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 22/104 (21%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
 Frame = +3

Query: 243 IKVLIKFNTCYKNDMTFRLNICFKD-I*VKKSEICNYYVSFKANLLSNYNK*FKKVTNIH 419
           +K+  + +TC   +M  + ++  KD      SE CN+  +  A+    +++ FK++    
Sbjct: 57  LKICPQGSTCCSQEMEEKYSLQSKDDFKSVVSEQCNHLQAVFASRYKKFDEFFKELLENA 116

Query: 420 SQILSFIYLKKYFYINMQIFLNHNNKVRK*MY*QVYKNHKLGNL 551
            + L+ +++K Y ++ MQ     N+++ K ++ ++ + + +GN+
Sbjct: 117 EKSLNDMFVKTYGHLYMQ-----NSELFKDLFVELKRYYVVGNV 155


>AL109623-1|CAB86664.2|  556|Homo sapiens glypican 4 protein.
          Length = 556

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 22/104 (21%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
 Frame = +3

Query: 243 IKVLIKFNTCYKNDMTFRLNICFKD-I*VKKSEICNYYVSFKANLLSNYNK*FKKVTNIH 419
           +K+  + +TC   +M  + ++  KD      SE CN+  +  A+    +++ FK++    
Sbjct: 57  LKICPQGSTCCSQEMEEKYSLQSKDDFKSVVSEQCNHLQAVFASRYKKFDEFFKELLENA 116

Query: 420 SQILSFIYLKKYFYINMQIFLNHNNKVRK*MY*QVYKNHKLGNL 551
            + L+ +++K Y ++ MQ     N+++ K ++ ++ + + +GN+
Sbjct: 117 EKSLNDMFVKTYGHLYMQ-----NSELFKDLFVELKRYYVVGNV 155


>AL034400-1|CAI42076.1|  556|Homo sapiens glypican 4 protein.
          Length = 556

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 22/104 (21%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
 Frame = +3

Query: 243 IKVLIKFNTCYKNDMTFRLNICFKD-I*VKKSEICNYYVSFKANLLSNYNK*FKKVTNIH 419
           +K+  + +TC   +M  + ++  KD      SE CN+  +  A+    +++ FK++    
Sbjct: 57  LKICPQGSTCCSQEMEEKYSLQSKDDFKSVVSEQCNHLQAVFASRYKKFDEFFKELLENA 116

Query: 420 SQILSFIYLKKYFYINMQIFLNHNNKVRK*MY*QVYKNHKLGNL 551
            + L+ +++K Y ++ MQ     N+++ K ++ ++ + + +GN+
Sbjct: 117 EKSLNDMFVKTYGHLYMQ-----NSELFKDLFVELKRYYVVGNV 155


>AF064826-1|AAC31899.1|  556|Homo sapiens glypican 4 protein.
          Length = 556

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 22/104 (21%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
 Frame = +3

Query: 243 IKVLIKFNTCYKNDMTFRLNICFKD-I*VKKSEICNYYVSFKANLLSNYNK*FKKVTNIH 419
           +K+  + +TC   +M  + ++  KD      SE CN+  +  A+    +++ FK++    
Sbjct: 57  LKICPQGSTCCSQEMEEKYSLQSKDDFKSVVSEQCNHLQAVFASRYKKFDEFFKELLENA 116

Query: 420 SQILSFIYLKKYFYINMQIFLNHNNKVRK*MY*QVYKNHKLGNL 551
            + L+ +++K Y ++ MQ     N+++ K ++ ++ + + +GN+
Sbjct: 117 EKSLNDMFVKTYGHLYMQ-----NSELFKDLFVELKRYYVVGNV 155


>AF030186-1|AAC69991.1|  556|Homo sapiens glypican-4 protein.
          Length = 556

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 22/104 (21%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
 Frame = +3

Query: 243 IKVLIKFNTCYKNDMTFRLNICFKD-I*VKKSEICNYYVSFKANLLSNYNK*FKKVTNIH 419
           +K+  + +TC   +M  + ++  KD      SE CN+  +  A+    +++ FK++    
Sbjct: 57  LKICPQGSTCCSQEMEEKYSLQSKDDFKSVVSEQCNHLQAVFASRYKKFDEFFKELLENA 116

Query: 420 SQILSFIYLKKYFYINMQIFLNHNNKVRK*MY*QVYKNHKLGNL 551
            + L+ +++K Y ++ MQ     N+++ K ++ ++ + + +GN+
Sbjct: 117 EKSLNDMFVKTYGHLYMQ-----NSELFKDLFVELKRYYVVGNV 155


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,509,377
Number of Sequences: 237096
Number of extensions: 902116
Number of successful extensions: 1649
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1643
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)