Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_B11
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   2.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.6  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   8.6  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 5/14 (35%), Positives = 12/14 (85%)
 Frame = -3

Query: 100 CCVMLIDLFYITHV 59
           C +++ +L+Y++HV
Sbjct: 258 CVIVIFELYYLSHV 271


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 470  HLVFIHFLLQLQGSILIASVI 408
            H+  +HFLLQ+ G +    +I
Sbjct: 1421 HVNKLHFLLQIIGGVTTYIII 1441


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 78  YFTLHMLVCEVLY 40
           YFTLH+L    +Y
Sbjct: 201 YFTLHLLFLPCIY 213


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 426 YTSLQLEQKMYKYQMTPSL 482
           Y+SLQL+Q   ++Q T  L
Sbjct: 128 YSSLQLQQLNRRFQRTQYL 146


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,792
Number of Sequences: 336
Number of extensions: 2335
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)