Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_B11
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_1098 - 30395704-30395837,30396644-30396751,30396933-303971... 76 1e-14
02_05_0873 - 32372143-32372287,32372678-32372754,32372863-323730... 64 6e-11
03_03_0128 - 14677152-14677296,14677381-14677457,14679836-14680312 63 1e-10
07_03_1385 + 26189034-26189294,26189427-26189636,26191016-261910... 60 1e-09
09_04_0676 - 19383757-19383890,19384308-19384415,19384493-193846... 60 1e-09
09_04_0359 + 16941904-16942110,16943636-16943785,16944084-169442... 58 4e-09
08_02_1381 - 26551920-26552053,26552963-26553070,26553154-265533... 56 2e-08
06_01_0751 + 5630036-5630233,5630623-5630718,5631420-5631629,563... 36 0.019
08_02_0963 + 23068851-23069042,23069262-23069414,23069590-230696... 31 0.73
07_03_0647 - 20253380-20253505,20253718-20253727,20253864-202539... 28 5.1
07_03_0642 - 20216944-20217069,20217282-20217291,20217428-202175... 28 5.1
11_01_0442 - 3369827-3370168,3370608-3372616,3372953-3373277,337... 27 6.8
>03_05_1098 -
30395704-30395837,30396644-30396751,30396933-30397119,
30398127-30398330
Length = 210
Score = 76.2 bits (179), Expect = 1e-14
Identities = 38/135 (28%), Positives = 67/135 (49%)
Frame = -1
Query: 516 IXGPDGNVIHKAERESSGIYTFSAPTAGKYTYCFSNKMSSMTPKVVMFNLEIGEPQTKSG 337
+ P GN ++ + +S + F AP G Y +CF N + P+ V F + +G +
Sbjct: 69 VTSPGGNTVYTLKGKSGDKFEFKAPRGGMYKFCFHNPYGA--PETVSFYIHVGHIPNEHN 126
Query: 336 NEXEADHNKLEDMIKELATTLRTIKHDQEYMQVRDRIHRSINESTNSRVVMWSIFEASVL 157
+ + + I EL L ++ +Q+Y++ R+ HR NEST RV+ ++I E
Sbjct: 127 LAKDEHLDPINVKIAELKEALESVTAEQKYLKAREARHRHTNESTRRRVMFYTIAEYLAF 186
Query: 156 LVMTIGQVYYLKRFF 112
+ + QV Y++R F
Sbjct: 187 MGASALQVVYIRRLF 201
>02_05_0873 -
32372143-32372287,32372678-32372754,32372863-32373072,
32374645-32374869
Length = 218
Score = 64.1 bits (149), Expect = 6e-11
Identities = 37/144 (25%), Positives = 76/144 (52%), Gaps = 3/144 (2%)
Frame = -1
Query: 516 IXGPDGNVIHKAERESSGIYTFSAPTAGKYTYCFSNKMSSMTPKVVMFNLEIGEPQTKSG 337
+ P GN +H E + G + F+ AG Y CF S+ + NL+
Sbjct: 76 VTSPYGNTLHHNENATVGQFAFTTSEAGNYLACFWID-SAEKGSGISINLDWKIGIAAKD 134
Query: 336 NEXEADHNKLEDM---IKELATTLRTIKHDQEYMQVRDRIHRSINESTNSRVVMWSIFEA 166
+ A K+E + +++L +++I + Y++ R+ R+++E TN+RV +SI
Sbjct: 135 WDVIAKKEKIEGVELELRKLEVAVQSIHQNMIYLKAREAEMRTVSEKTNARVAWFSILSL 194
Query: 165 SVLLVMTIGQVYYLKRFFEVQRVV 94
SV +V++I Q+++L+ +F+ ++++
Sbjct: 195 SVCIVVSILQLWHLQGYFQKKKLI 218
>03_03_0128 - 14677152-14677296,14677381-14677457,14679836-14680312
Length = 232
Score = 62.9 bits (146), Expect = 1e-10
Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 4/145 (2%)
Frame = -1
Query: 516 IXGPDGNVIHKAERESSGIYTFSAPTAGKYTYCFSNKMSSMTPKVVM-FNLEIG---EPQ 349
+ P GN +H +E SG + F+A AG Y CF T V F+ G
Sbjct: 90 VTSPYGNSLHYSENVQSGNFAFTASEAGDYLACFWAPDHRPTATVGFEFDWRSGVSARDW 149
Query: 348 TKSGNEXEADHNKLEDMIKELATTLRTIKHDQEYMQVRDRIHRSINESTNSRVVMWSIFE 169
T + + D ++E +K+L T+ +I + Y++ R+ + +N TNSR+ F
Sbjct: 150 TNVAKKGQVDMMEVE--LKKLEDTINSIHEEMFYLRAREEEMQELNRRTNSRMAWLGFFS 207
Query: 168 ASVLLVMTIGQVYYLKRFFEVQRVV 94
++ L + Q+++LK FFE ++++
Sbjct: 208 LAICLSVAGLQLWHLKNFFERKKLL 232
>07_03_1385 +
26189034-26189294,26189427-26189636,26191016-26191092,
26191196-26191340
Length = 230
Score = 60.1 bits (139), Expect = 1e-09
Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 2/143 (1%)
Frame = -1
Query: 516 IXGPDGNVIHKAERESSGIYTFSAPTAGKYTYCFSNKMSSMTPKVVM-FNLEIGEPQTKS 340
+ P GN +H AE SG + F+A AG Y CF + F+ G
Sbjct: 88 VTSPYGNSVHYAENVPSGNFAFTATEAGDYLACFWAPDHKPPVSIGFEFDWRSGVAAKDW 147
Query: 339 GNEXEADHNKLEDM-IKELATTLRTIKHDQEYMQVRDRIHRSINESTNSRVVMWSIFEAS 163
N + + +M +K+L T+++I + Y++ R+ +++N+ TNSR+
Sbjct: 148 SNVAKKGQVDVMEMELKKLEETIKSIHEEMFYLREREEEMQNLNKQTNSRMAWLGFLSLG 207
Query: 162 VLLVMTIGQVYYLKRFFEVQRVV 94
+ L + Q+++LK FFE ++++
Sbjct: 208 ICLSVAGLQLWHLKTFFERKKLL 230
>09_04_0676 -
19383757-19383890,19384308-19384415,19384493-19384679,
19384937-19385143
Length = 211
Score = 59.7 bits (138), Expect = 1e-09
Identities = 35/136 (25%), Positives = 67/136 (49%)
Frame = -1
Query: 516 IXGPDGNVIHKAERESSGIYTFSAPTAGKYTYCFSNKMSSMTPKVVMFNLEIGEPQTKSG 337
+ P+GN IH + + S + F G + +CF+NK S + V F++ +
Sbjct: 70 VRDPNGNQIHDSRDKISDKFEFIVHRRGVHRFCFTNK--SPYHETVDFDVLVSHFSYYDQ 127
Query: 336 NEXEADHNKLEDMIKELATTLRTIKHDQEYMQVRDRIHRSINESTNSRVVMWSIFEASVL 157
+ + + L + I +L L I+ +Q +++ + +NE+ + R V + FE++ L
Sbjct: 128 HAKDEHFSALFEQIAKLDEALYNIQFEQHWLEAQTDRQAILNENMSRRAVHKAFFESAAL 187
Query: 156 LVMTIGQVYYLKRFFE 109
+ ++ QVY L R FE
Sbjct: 188 IAASVVQVYLLHRLFE 203
>09_04_0359 +
16941904-16942110,16943636-16943785,16944084-16944293,
16944376-16944452,16944554-16944698
Length = 262
Score = 58.0 bits (134), Expect = 4e-09
Identities = 34/144 (23%), Positives = 75/144 (52%), Gaps = 3/144 (2%)
Frame = -1
Query: 516 IXGPDGNVIHKAERESSGIYTFSAPTAGKYTYCFSNKMSSMTPKVVMFNLEIGEPQTKSG 337
+ P G+++H ++ S+G ++F+ AG Y CFS + VV NL+
Sbjct: 120 VTSPFGDIVHHKQKVSTGQFSFTTAEAGNYLACFSADGRNKR-LVVKLNLDWRVGIATKD 178
Query: 336 NEXEADHNKLEDM---IKELATTLRTIKHDQEYMQVRDRIHRSINESTNSRVVMWSIFEA 166
+ A KLE + + +L T+++ I + ++ ++ R +E TN+R SI
Sbjct: 179 WDSVAKKEKLEGVELELVKLETSVQAIHENLLLLRSKEANMRDTSEKTNARATWLSIISL 238
Query: 165 SVLLVMTIGQVYYLKRFFEVQRVV 94
V +++++ Q+++L+++F ++++
Sbjct: 239 IVCIIVSVLQLWHLQQYFRKKKLI 262
>08_02_1381 -
26551920-26552053,26552963-26553070,26553154-26553340,
26554107-26554316
Length = 212
Score = 55.6 bits (128), Expect = 2e-08
Identities = 32/136 (23%), Positives = 67/136 (49%)
Frame = -1
Query: 516 IXGPDGNVIHKAERESSGIYTFSAPTAGKYTYCFSNKMSSMTPKVVMFNLEIGEPQTKSG 337
+ P+G + + ++S + F G + +CF+NK S + V F++ +G
Sbjct: 71 VKDPNGAQVRDSRDKTSDKFEFIVQKRGVHRFCFTNK--SPYHETVDFDVHVGHFSYFDQ 128
Query: 336 NEXEADHNKLEDMIKELATTLRTIKHDQEYMQVRDRIHRSINESTNSRVVMWSIFEASVL 157
+ + L + I +L L I+ +Q +++ + +NE+ + R V ++ E++ L
Sbjct: 129 HAKDEHFAPLFEQIAKLDEALYNIQFEQHWLEAQTDRQAILNENMSRRAVHKALLESAAL 188
Query: 156 LVMTIGQVYYLKRFFE 109
+ ++ QVY L+R FE
Sbjct: 189 IAASVIQVYLLRRLFE 204
>06_01_0751 +
5630036-5630233,5630623-5630718,5631420-5631629,
5631735-5631811,5632204-5632222,5632304-5632348
Length = 214
Score = 35.9 bits (79), Expect = 0.019
Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 3/104 (2%)
Frame = -1
Query: 516 IXGPDGNVIHKAERESSGIYTFSAPTAGKYTYCFSNKMSSMTPKVVMFNLEIGEPQTKSG 337
+ P GN +H E ++G + F+ AG Y CF S V NL+
Sbjct: 99 VTSPYGNTVHHNENATTGQFAFTTSEAGNYLACFWLD-SPEKGSGVSLNLDWKIGIAAKD 157
Query: 336 NEXEADHNKLEDM---IKELATTLRTIKHDQEYMQVRDRIHRSI 214
+ A K+E + +++L + +I H+ Y++ R+ R++
Sbjct: 158 WDTVAKKEKIEGVELELRKLEAAVESIHHNLLYLKAREAEMRTL 201
>08_02_0963 +
23068851-23069042,23069262-23069414,23069590-23069666,
23069744-23069762,23070182-23070202
Length = 153
Score = 30.7 bits (66), Expect = 0.73
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -1
Query: 516 IXGPDGNVIHKAERESSGIYTFSAPTAGKYTYCFS 412
+ P G V+H E+ G ++F+ G Y CFS
Sbjct: 73 VTSPYGKVLHHREKVMQGQFSFNTAEPGVYLACFS 107
>07_03_0647 -
20253380-20253505,20253718-20253727,20253864-20253977,
20254063-20254382
Length = 189
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1
Query: 435 GKYTYCFSNKMSSMTPKVVMFNLEIGEPQTKSGNEXE 325
GK S ++S+TP+V + + G+PQ K GN +
Sbjct: 34 GKVKRSDSVPVASITPRVALQTVNGGKPQRKHGNRQQ 70
>07_03_0642 -
20216944-20217069,20217282-20217291,20217428-20217541,
20217627-20217946
Length = 189
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1
Query: 435 GKYTYCFSNKMSSMTPKVVMFNLEIGEPQTKSGNEXE 325
GK S ++S+TP+V + + G+PQ K GN +
Sbjct: 34 GKVKRSDSVPVASITPRVALQTVNGGKPQRKHGNRQQ 70
>11_01_0442 -
3369827-3370168,3370608-3372616,3372953-3373277,
3373386-3373415
Length = 901
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = -1
Query: 357 EPQTKSGNEXEADHNKLEDMIKELATTLRTIKHDQEYMQVRDRIHRSINE 208
E T+ + N L+D +KE LR + +QE ++RD + + E
Sbjct: 135 EASTQKNASLDDQVNHLDDALKECVRQLRQAREEQE-EKIRDAVAKKTQE 183
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,575,377
Number of Sequences: 37544
Number of extensions: 222716
Number of successful extensions: 469
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 464
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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