Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_B11
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF014940-5|AAB63937.1| 203|Caenorhabditis elegans Suppressor/en... 188 2e-48
AF039713-7|AAB96722.1| 203|Caenorhabditis elegans Hypothetical ... 81 5e-16
AL117207-7|CAB60397.1| 211|Caenorhabditis elegans Hypothetical ... 66 1e-11
Z74035-1|CAA98480.1| 204|Caenorhabditis elegans Hypothetical pr... 54 8e-08
Z68316-4|CAA92683.1| 234|Caenorhabditis elegans Hypothetical pr... 40 8e-04
Z77665-8|CAB01224.2| 135|Caenorhabditis elegans Hypothetical pr... 30 1.1
AF100673-4|AAP13734.2| 438|Caenorhabditis elegans Hypothetical ... 29 1.5
Z81513-13|CAB04180.2| 1213|Caenorhabditis elegans Hypothetical p... 27 6.0
AY741200-1|AAU89102.1| 596|Caenorhabditis elegans STE20-like se... 27 8.0
AL132898-15|CAC14417.2| 596|Caenorhabditis elegans Hypothetical... 27 8.0
>AF014940-5|AAB63937.1| 203|Caenorhabditis elegans
Suppressor/enhancer of lin-12 protein9 protein.
Length = 203
Score = 188 bits (458), Expect = 2e-48
Identities = 86/145 (59%), Positives = 115/145 (79%), Gaps = 4/145 (2%)
Frame = -1
Query: 516 IXGPDGNVIHKAERESSGIYTFSAPTAGKYTYCFSNKMSSMTPKVVMFNLEIGEPQTKS- 340
I GPD I+K ERESSG +TF+A G YTYCF NKMS+MTPK VMF +EI EP ++
Sbjct: 59 ITGPDNKEIYKGERESSGKFTFAAHMDGVYTYCFGNKMSTMTPKAVMFTVEITEPHQQAP 118
Query: 339 ---GNEXEADHNKLEDMIKELATTLRTIKHDQEYMQVRDRIHRSINESTNSRVVMWSIFE 169
N+ AD+ KLE+M++EL++ L ++KH+QEYM+VR+R+HR+INE+TNSRVVMW+ FE
Sbjct: 119 GAAANQDAADNAKLEEMVRELSSALMSVKHEQEYMEVRERVHRNINENTNSRVVMWAAFE 178
Query: 168 ASVLLVMTIGQVYYLKRFFEVQRVV 94
A VL+ MT+GQ++YLKRFFEV+ +V
Sbjct: 179 AFVLVGMTVGQIFYLKRFFEVRTMV 203
>AF039713-7|AAB96722.1| 203|Caenorhabditis elegans Hypothetical
protein F57B10.5 protein.
Length = 203
Score = 81.0 bits (191), Expect = 5e-16
Identities = 43/141 (30%), Positives = 74/141 (52%), Gaps = 2/141 (1%)
Frame = -1
Query: 516 IXGPDGNVIHKAERESSGIYTFSAPTAGKYTYCFSNKMSSMTPKVVMFNLEIGEPQTKSG 337
I P+G V++K ++ F A G Y CFSN+ S+ + K+V + + G+
Sbjct: 60 IEDPNGKVLYKDTKKQYDSINFKAEVEGTYKACFSNEFSTFSHKIVYMDWQFGDQNALHA 119
Query: 336 NEXEADH--NKLEDMIKELATTLRTIKHDQEYMQVRDRIHRSINESTNSRVVMWSIFEAS 163
+ H +LE+ + LRTI Q + ++R+ R E N RV++WS+ +++
Sbjct: 120 AVTQGAHAMTQLENYAVAIGDKLRTIDDYQTHHRLREATGRKRAEELNERVMIWSLGQSA 179
Query: 162 VLLVMTIGQVYYLKRFFEVQR 100
V++ + IGQV+ LK FF +R
Sbjct: 180 VVVFIGIGQVFLLKSFFNDKR 200
>AL117207-7|CAB60397.1| 211|Caenorhabditis elegans Hypothetical
protein Y60A3A.9 protein.
Length = 211
Score = 66.5 bits (155), Expect = 1e-11
Identities = 42/145 (28%), Positives = 74/145 (51%), Gaps = 4/145 (2%)
Frame = -1
Query: 516 IXGPDGNVIHKAERESSGIYTFSAPTAGKYTYC-FSNKMSSMTPKVVMFNLEI--GEPQT 346
+ P+ VI + G +TF++ T G++ C +SN + + +L+I G+
Sbjct: 67 VKDPEDKVILSKLYTAEGRFTFTSNTPGEHVICIYSNSTAWFNGAQLRVHLDIQAGDHAQ 126
Query: 345 KSGNEXEADH-NKLEDMIKELATTLRTIKHDQEYMQVRDRIHRSINESTNSRVVMWSIFE 169
+ D N+L+ I++L + I +Q Y + R+ R +ESTNSRV WSI +
Sbjct: 127 DYAQIAQKDKLNELQLRIRQLLDQVDQITKEQNYQRYREERFRQTSESTNSRVFYWSIAQ 186
Query: 168 ASVLLVMTIGQVYYLKRFFEVQRVV 94
VL + Q+ +L+ FFE +++V
Sbjct: 187 VVVLAITGAWQMRHLRGFFEAKKLV 211
>Z74035-1|CAA98480.1| 204|Caenorhabditis elegans Hypothetical
protein F47G9.1 protein.
Length = 204
Score = 53.6 bits (123), Expect = 8e-08
Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 6/142 (4%)
Frame = -1
Query: 501 GNVIHKAER--ESSGIYTFSAPTAGKYTYCFSNKMSSMTP---KVVMFNLEIGEPQTKSG 337
G+ ++K E + G + F+A + C N + P + V L+ G
Sbjct: 62 GHTLYKRENFADLKGKFAFTADEYDIFEICIENHPPAGHPGEKREVSLILKHGVEAKNYD 121
Query: 336 NEXEADHNK-LEDMIKELATTLRTIKHDQEYMQVRDRIHRSINESTNSRVVMWSIFEASV 160
+ +A+ K LE ++ L +I D +M+ R+ R+ NESTNSRV+ SIF
Sbjct: 122 DIAKAEKLKPLEVELRRLEDMADSITKDFAFMRQREEEMRNTNESTNSRVLYLSIFSMLC 181
Query: 159 LLVMTIGQVYYLKRFFEVQRVV 94
LL + I QV +L+ +F+ ++++
Sbjct: 182 LLGLAIWQVLFLRNYFKSKKLI 203
>Z68316-4|CAA92683.1| 234|Caenorhabditis elegans Hypothetical
protein K08E4.6 protein.
Length = 234
Score = 40.3 bits (90), Expect = 8e-04
Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 18/148 (12%)
Frame = -1
Query: 498 NVIHKAERESSGIYTFSAPTAGKYTYCFSNKMSSMTPKVVMF---------NLEIGE--P 352
N++ + + + G + G Y CF N S + KVV F NL+ +
Sbjct: 72 NILKQDQLKVDGSHRIELNQPGDYQVCFDNSFSYQSRKVVFFEIFLFDAHGNLDEADLSA 131
Query: 351 QTKSGNEXEADHNKLEDMIKELATTLRTIKHDQ---EYMQVRDRIH----RSINESTNSR 193
++ ++ A N+L I E IK++ EY Q R H R++ + R
Sbjct: 132 MARTDSDLSAKMNELGVTIDEFHRRANGIKNNLNKVEYHQALLRAHEARDRAVMSANFDR 191
Query: 192 VVMWSIFEASVLLVMTIGQVYYLKRFFE 109
V WS+ V++ + QV+ ++ FE
Sbjct: 192 VTFWSVVHTLVMVGVAGVQVFMIRSLFE 219
>Z77665-8|CAB01224.2| 135|Caenorhabditis elegans Hypothetical
protein K02E11.7 protein.
Length = 135
Score = 29.9 bits (64), Expect = 1.1
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -3
Query: 304 GHDQRTCYYIKNYQTRSRVYAGAXSY 227
G +++TC Y +N QT+++V AG +Y
Sbjct: 72 GKNKKTCGYWENIQTKAKVVAGKTTY 97
>AF100673-4|AAP13734.2| 438|Caenorhabditis elegans Hypothetical
protein Y66H1B.5 protein.
Length = 438
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = -1
Query: 516 IXGPDGN--VIHKAERESSGIYTFSAPT--AGKYTYCFSNKMSSMTPKVVMFNLEIGEPQ 349
+ GPDG + H E +GIY S PT AG+Y F + +V + +IG +
Sbjct: 284 VFGPDGKERLNHVRSTEQNGIYDVSFPTDMAGEYCVVFYINGQEVAARVPVMAEKIGRKE 343
>Z81513-13|CAB04180.2| 1213|Caenorhabditis elegans Hypothetical
protein F26D2.10 protein.
Length = 1213
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 315 NKLEDMIKELATTLRTIKHDQEYMQVRDRIH 223
+ ++D+IKEL TTL + E Q+RDR H
Sbjct: 446 SNVKDIIKELNTTLNFMTGSNE--QLRDRFH 474
>AY741200-1|AAU89102.1| 596|Caenorhabditis elegans STE20-like
serine/threonine kinase protein.
Length = 596
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = -1
Query: 369 LEIGEPQTKSGNEXEADHNKLEDMIKELATTLRTIKHDQEYMQVRDRIHRSI 214
L+I + + K+ + +A L+++ +AT LR + EY + +IHR I
Sbjct: 192 LDILKRKVKAIGKEQAQFGVLDEV--SIATVLREVLKGLEYFHLNGQIHRDI 241
>AL132898-15|CAC14417.2| 596|Caenorhabditis elegans Hypothetical
protein Y59A8B.23 protein.
Length = 596
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = -1
Query: 369 LEIGEPQTKSGNEXEADHNKLEDMIKELATTLRTIKHDQEYMQVRDRIHRSI 214
L+I + + K+ + +A L+++ +AT LR + EY + +IHR I
Sbjct: 192 LDILKRKVKAIGKEQAQFGVLDEV--SIATVLREVLKGLEYFHLNGQIHRDI 241
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,475,755
Number of Sequences: 27780
Number of extensions: 219942
Number of successful extensions: 592
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 589
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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