Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_B09
         (396 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   1.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   1.5  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   3.4  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    20   7.7  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +1

Query: 52  LYPQYDARTSSVQGRKQHSSTTP 120
           LYP + +R ++ +G+K+     P
Sbjct: 542 LYPDWSSRANATRGKKRKRKQDP 564


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +1

Query: 52  LYPQYDARTSSVQGRKQHSSTTP 120
           LYP + +R ++ +G+K+     P
Sbjct: 434 LYPDWSSRANATRGKKRKRKQDP 456


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -1

Query: 78  RSRIVLRIEYFYVTCKLY*IYF 13
           RSRI L + Y +VT  L   YF
Sbjct: 131 RSRIHLFVRYVFVTSYLLFDYF 152


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -1

Query: 117 RSGRMLFPALH 85
           +SGR +FPAL+
Sbjct: 43  KSGRRMFPALN 53


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,227
Number of Sequences: 336
Number of extensions: 2015
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8435920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)