Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_B05
         (720 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    24   1.4  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    23   1.9  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   2.5  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = +3

Query: 342 VTASWNKMDVSGARRAAPLDAIVRQHNTQNYFKWKHCKKT*IHPLWFLIPHLIH 503
           + AS+  +  SGA  +A  D +V    T + ++W + + T  H   +L  H+I+
Sbjct: 5   LVASFLLVYFSGALVSATTDKVVCYWGTWSTYRWGNGRFTVDHIDPYLCTHIIY 58


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +2

Query: 137 IYDWYINKLEEQSKLLNCKTFRCAVRGILCEL 232
           I D  +++ + +   LNC   + A+  +LCE+
Sbjct: 50  ITDQSLDEAQARKHTLNCHRMKPALFSVLCEI 81


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +3

Query: 132 SSYMTGISTNLRNSQSC*IVRHLDVLCAGYYAN 230
           ++YM  I+TNLR +Q   IV  L  L     AN
Sbjct: 55  TAYMVYITTNLRITQKLSIVTQLADLIFSASAN 87


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,369
Number of Sequences: 336
Number of extensions: 4254
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)