Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_B05
         (720 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.13 
SB_48254| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00076)         30   1.6  
SB_13455| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.9  
SB_8505| Best HMM Match : CitD (HMM E-Value=0.91)                      28   6.6  

>SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 4232

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
 Frame = -1

Query: 600  TEDNKQLACKSFR*-HVYCNPNFTFSRALPSYLHVSGGVLETTVDGFRFFYNVST*NSSE 424
            T+D +++   S R      N  FT     P +  V   VL T  +  R FYN    N  E
Sbjct: 3665 TKDTQRITSLSIRVPRTQPNGPFTVWEGSPLFKSVRNKVLLTVKNSKRAFYNNKVKNLKE 3724

Query: 423  CCAGELWRLVEPHGG 379
             C G  W+ ++   G
Sbjct: 3725 TCVGRWWKEIKSLAG 3739


>SB_48254| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00076)
          Length = 1414

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 15/51 (29%), Positives = 22/51 (43%)
 Frame = -1

Query: 531  FSRALPSYLHVSGGVLETTVDGFRFFYNVST*NSSECCAGELWRLVEPHGG 379
            + +  P +  V   VL T  +  R FYN    N  E C G  W+ ++   G
Sbjct: 993  YGKDSPLFKSVRNKVLLTVKNSKRAFYNNKVKNLKETCVGRWWKEIKSLAG 1043


>SB_13455| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1387

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 15/46 (32%), Positives = 20/46 (43%)
 Frame = -1

Query: 516 PSYLHVSGGVLETTVDGFRFFYNVST*NSSECCAGELWRLVEPHGG 379
           P +  V   VL T  +  R FYN    N  E C G  W+ ++   G
Sbjct: 504 PLFKSVRNKVLLTVKNSKRAFYNNKLKNLKETCVGRWWKEIKSLAG 549


>SB_8505| Best HMM Match : CitD (HMM E-Value=0.91)
          Length = 909

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -1

Query: 459 FFYNVST*NSSECCAGELWRLVEPHGGRH*HPFYSKKQL 343
           FF+N S+  +S     E WRL++ HG R   P   K+ +
Sbjct: 236 FFFNSSSQTTSLVSEPEFWRLIQ-HGVRSKEPLSHKRSM 273


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,737,376
Number of Sequences: 59808
Number of extensions: 472635
Number of successful extensions: 984
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 984
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1913853903
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)