Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_B05
         (720 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC039004-1|AAH39004.1|  612|Homo sapiens carnitine O-octanoyltra...    31   4.1  
AF168793-1|AAF03234.1|  612|Homo sapiens peroxisomal carnitine o...    31   4.1  
AF073770-1|AAD41654.1|  612|Homo sapiens carnitine octanoyltrans...    31   4.1  
AY210418-1|AAO34701.1| 3487|Homo sapiens CUB and sushi multiple ...    30   9.6  
AB212622-1|BAD97692.1| 3631|Homo sapiens CSMD2 protein protein.        30   9.6  

>BC039004-1|AAH39004.1|  612|Homo sapiens carnitine
           O-octanoyltransferase protein.
          Length = 612

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 540 NFTFSRALPSYLHVSGGVLETTVDGFRFFYNV 445
           NF  S +L  YL V G V+    +G+ FFY++
Sbjct: 538 NFVLSTSLVGYLRVQGVVVPMVHNGYGFFYHI 569


>AF168793-1|AAF03234.1|  612|Homo sapiens peroxisomal carnitine
           octanoyltransferase protein.
          Length = 612

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 540 NFTFSRALPSYLHVSGGVLETTVDGFRFFYNV 445
           NF  S +L  YL V G V+    +G+ FFY++
Sbjct: 538 NFVLSTSLVGYLRVQGVVVPMVHNGYGFFYHI 569


>AF073770-1|AAD41654.1|  612|Homo sapiens carnitine
           octanoyltransferase protein.
          Length = 612

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 540 NFTFSRALPSYLHVSGGVLETTVDGFRFFYNV 445
           NF  S +L  YL V G V+    +G+ FFY++
Sbjct: 538 NFVLSTSLVGYLRVQGVVVPMVHNGYGFFYHI 569


>AY210418-1|AAO34701.1| 3487|Homo sapiens CUB and sushi multiple
           domains 2 protein.
          Length = 3487

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -1

Query: 549 CNPNFTFSRALPSYLHVSGGVLE 481
           C PNF +SRALPS   + GG ++
Sbjct: 907 CEPNFQWSRALPSCEALCGGFIQ 929


>AB212622-1|BAD97692.1| 3631|Homo sapiens CSMD2 protein protein.
          Length = 3631

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -1

Query: 549  CNPNFTFSRALPSYLHVSGGVLE 481
            C PNF +SRALPS   + GG ++
Sbjct: 947  CEPNFQWSRALPSCEALCGGFIQ 969


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,158,121
Number of Sequences: 237096
Number of extensions: 2486442
Number of successful extensions: 4531
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4531
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)