Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_B05
(720 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical pr... 31 0.83
Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical pr... 31 0.83
AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-l... 31 0.83
AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-l... 31 0.83
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 31 1.1
Z49125-4|CAA88936.1| 644|Caenorhabditis elegans Hypothetical pr... 28 5.8
U51994-2|AAA96065.3| 1311|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z75553-5|CAA99950.2| 533|Caenorhabditis elegans Hypothetical pr... 28 7.7
>Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical
protein B0457.1b protein.
Length = 1012
Score = 31.1 bits (67), Expect = 0.83
Identities = 21/77 (27%), Positives = 35/77 (45%)
Frame = +2
Query: 5 TCYQMRH*NLLTLGSGCASHGHNTMLTECRMLDCNYFGLS*NIIIYDWYINKLEEQSKLL 184
TC H L SGC HN +T C +F + ++ +D +N++++ LL
Sbjct: 494 TCVWWNHHELKWKPSGCKLSYHNKTMTSCDCTHLTHFAVLMDVRGHD--LNEIDQ--TLL 549
Query: 185 NCKTFRCAVRGILCELL 235
T+ + I+C LL
Sbjct: 550 TLLTYVGCIISIICLLL 566
>Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical
protein B0457.1a protein.
Length = 1014
Score = 31.1 bits (67), Expect = 0.83
Identities = 21/77 (27%), Positives = 35/77 (45%)
Frame = +2
Query: 5 TCYQMRH*NLLTLGSGCASHGHNTMLTECRMLDCNYFGLS*NIIIYDWYINKLEEQSKLL 184
TC H L SGC HN +T C +F + ++ +D +N++++ LL
Sbjct: 496 TCVWWNHHELKWKPSGCKLSYHNKTMTSCDCTHLTHFAVLMDVRGHD--LNEIDQ--TLL 551
Query: 185 NCKTFRCAVRGILCELL 235
T+ + I+C LL
Sbjct: 552 TLLTYVGCIISIICLLL 568
>AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-like
protein LAT-1B protein.
Length = 1012
Score = 31.1 bits (67), Expect = 0.83
Identities = 21/77 (27%), Positives = 35/77 (45%)
Frame = +2
Query: 5 TCYQMRH*NLLTLGSGCASHGHNTMLTECRMLDCNYFGLS*NIIIYDWYINKLEEQSKLL 184
TC H L SGC HN +T C +F + ++ +D +N++++ LL
Sbjct: 494 TCVWWNHHELKWKPSGCKLSYHNKTMTSCDCTHLTHFAVLMDVRGHD--LNEIDQ--TLL 549
Query: 185 NCKTFRCAVRGILCELL 235
T+ + I+C LL
Sbjct: 550 TLLTYVGCIISIICLLL 566
>AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-like
protein LAT-1A protein.
Length = 1014
Score = 31.1 bits (67), Expect = 0.83
Identities = 21/77 (27%), Positives = 35/77 (45%)
Frame = +2
Query: 5 TCYQMRH*NLLTLGSGCASHGHNTMLTECRMLDCNYFGLS*NIIIYDWYINKLEEQSKLL 184
TC H L SGC HN +T C +F + ++ +D +N++++ LL
Sbjct: 496 TCVWWNHHELKWKPSGCKLSYHNKTMTSCDCTHLTHFAVLMDVRGHD--LNEIDQ--TLL 551
Query: 185 NCKTFRCAVRGILCELL 235
T+ + I+C LL
Sbjct: 552 TLLTYVGCIISIICLLL 568
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = -1
Query: 183 NSFDCSSSLLIYQSYMMMFYDNPK*LQSNILHSVSIVLCP*EAQPEPSVRRF 28
NSFD +++L+ + +M+ D K + + HS + CP +PEP + F
Sbjct: 2275 NSFDFKATVLVPPTIIMLDKDKNK---TAVEHSTVTLSCPATGKPEPDITWF 2323
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = -1
Query: 183 NSFDCSSSLLIYQSYMMMFYDNPK*LQSNILHSVSIVLCP*EAQPEPSVRRF 28
NSFD +++L+ + +M+ D K + + HS + CP +PEP + F
Sbjct: 2275 NSFDFKATVLVPPTIIMLDKDKNK---TAVEHSTVTLSCPATGKPEPDITWF 2323
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = -1
Query: 183 NSFDCSSSLLIYQSYMMMFYDNPK*LQSNILHSVSIVLCP*EAQPEPSVRRF 28
NSFD +++L+ + +M+ D K + + HS + CP +PEP + F
Sbjct: 2275 NSFDFKATVLVPPTIIMLDKDKNK---TAVEHSTVTLSCPATGKPEPDITWF 2323
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = -1
Query: 183 NSFDCSSSLLIYQSYMMMFYDNPK*LQSNILHSVSIVLCP*EAQPEPSVRRF 28
NSFD +++L+ + +M+ D K + + HS + CP +PEP + F
Sbjct: 2275 NSFDFKATVLVPPTIIMLDKDKNK---TAVEHSTVTLSCPATGKPEPDITWF 2323
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = -1
Query: 183 NSFDCSSSLLIYQSYMMMFYDNPK*LQSNILHSVSIVLCP*EAQPEPSVRRF 28
NSFD +++L+ + +M+ D K + + HS + CP +PEP + F
Sbjct: 2275 NSFDFKATVLVPPTIIMLDKDKNK---TAVEHSTVTLSCPATGKPEPDITWF 2323
>Z49125-4|CAA88936.1| 644|Caenorhabditis elegans Hypothetical
protein C47G2.4 protein.
Length = 644
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = +3
Query: 546 YNKHVNERTCMPIVCYPLWYQQYWRLVVRPLQVQTTKMNFSEIYFIQNYF 695
YN ++ TC+PI WY + R L + T M F ++ +F
Sbjct: 339 YNLELSRNTCVPIGVRRFWYTRLQTPFCRILGIVTVFMTFFVLFSECTFF 388
>U51994-2|AAA96065.3| 1311|Caenorhabditis elegans Hypothetical protein
R03G5.3 protein.
Length = 1311
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 249 YGLLIFILLHFVPRNMSSK-SQLLLKVPPYLNVTASWNK 362
+GL + L +F+ S +Q+LLKV P+L + W K
Sbjct: 1223 FGLFLQALWNFIICGYSDGLNQMLLKVSPWLELVRQWEK 1261
>Z75553-5|CAA99950.2| 533|Caenorhabditis elegans Hypothetical
protein ZC443.5 protein.
Length = 533
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = -1
Query: 237 ASNSHNIPRTAHLNVLQFNSFDCSSSLLIYQSYMMMF 127
A NS N R +LN QF SFD +SS+++ +++F
Sbjct: 474 ALNSLN-SRGRYLNTFQFYSFDIASSIVMLALLVLVF 509
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,191,470
Number of Sequences: 27780
Number of extensions: 377409
Number of successful extensions: 674
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 674
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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