Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_B04
(594 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 223 8e-59
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 223 8e-59
SB_56| Best HMM Match : Actin (HMM E-Value=0) 223 8e-59
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 223 8e-59
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 223 1e-58
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 221 3e-58
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 194 6e-50
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 74 8e-14
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 69 3e-12
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 6e-10
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_54| Best HMM Match : Actin (HMM E-Value=0) 45 5e-05
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 38 0.005
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 30 1.6
SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0) 29 2.1
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_8479| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_50207| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_20112| Best HMM Match : EGF (HMM E-Value=0) 27 8.6
SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_22697| Best HMM Match : Hirudin (HMM E-Value=3.2) 27 8.6
SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 223 bits (545), Expect = 8e-59
Identities = 103/108 (95%), Positives = 106/108 (98%)
Frame = -1
Query: 591 GMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 412
GME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI+ALAP TMKI
Sbjct: 231 GMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEISALAPPTMKI 290
Query: 411 KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 268
KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP+IVHRKCF
Sbjct: 291 KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 338
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 223 bits (545), Expect = 8e-59
Identities = 103/108 (95%), Positives = 106/108 (98%)
Frame = -1
Query: 591 GMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 412
GME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKEIT+LAP TMKI
Sbjct: 269 GMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKI 328
Query: 411 KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 268
KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 329 KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 223 bits (545), Expect = 8e-59
Identities = 103/108 (95%), Positives = 106/108 (98%)
Frame = -1
Query: 591 GMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 412
GME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKEIT+LAP TMKI
Sbjct: 268 GMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKI 327
Query: 411 KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 268
KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 328 KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 223 bits (545), Expect = 8e-59
Identities = 102/108 (94%), Positives = 107/108 (99%)
Frame = -1
Query: 591 GMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 412
GME+ GIHETTYNSIMKCDVDIRKDLYANTV+SGGTTMYPG+ADRMQKEI+ALAPSTMKI
Sbjct: 242 GMESSGIHETTYNSIMKCDVDIRKDLYANTVMSGGTTMYPGLADRMQKEISALAPSTMKI 301
Query: 411 KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 268
KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP+IVHRKCF
Sbjct: 302 KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 349
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 223 bits (544), Expect = 1e-58
Identities = 103/108 (95%), Positives = 106/108 (98%)
Frame = -1
Query: 591 GMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 412
GME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKEI+ALAP TMKI
Sbjct: 269 GMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEISALAPPTMKI 328
Query: 411 KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 268
KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 329 KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 221 bits (540), Expect = 3e-58
Identities = 102/108 (94%), Positives = 106/108 (98%)
Frame = -1
Query: 591 GMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 412
GME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGG+TM+PGIADRMQKEI+ALAP TMKI
Sbjct: 268 GMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEISALAPPTMKI 327
Query: 411 KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 268
KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 328 KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 194 bits (472), Expect = 6e-50
Identities = 88/108 (81%), Positives = 97/108 (89%)
Frame = -1
Query: 591 GMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 412
GMEA GIHE YN IMKCDVDIRKDLY+N VLSGG+TM+PGIADRMQKEI LA ++MK+
Sbjct: 42 GMEAPGIHEAIYNCIMKCDVDIRKDLYSNCVLSGGSTMFPGIADRMQKEIAMLANASMKV 101
Query: 411 KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 268
K+IAPPERKYSVWIGGSILASLSTFQQMWI+K+EY E GP IVHRKCF
Sbjct: 102 KVIAPPERKYSVWIGGSILASLSTFQQMWIAKEEYHEYGPPIVHRKCF 149
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 74.1 bits (174), Expect = 8e-14
Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 16/122 (13%)
Frame = -1
Query: 573 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITA-------------- 436
+ E N I C +D+R+ LY N VLSGG+TM+ R+Q++I
Sbjct: 223 LSEVVDNVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDIKRTVDARLKMSETLSG 282
Query: 435 --LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*T 262
+ P ++ ++I+ ++Y+VW GGS+LAS F + +K +YDE GPSI F
Sbjct: 283 GRIKPKPIETQVISHHMQRYAVWFGGSMLASTPEFYSVCHTKADYDEHGPSICRHNPF-L 341
Query: 261 HR 256
HR
Sbjct: 342 HR 343
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 68.9 bits (161), Expect = 3e-12
Identities = 30/85 (35%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Frame = -1
Query: 591 GMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 412
G A G+ + S+ D+DIR L+ + +++GG T+ G +R+ +E+ + P +M++
Sbjct: 146 GSTAMGVTQVVTTSVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRL 205
Query: 411 KII---APPERKYSVWIGGSILASL 346
K+I + E++++ WIGGSILASL
Sbjct: 206 KLISNNSSVEKRFNPWIGGSILASL 230
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 61.3 bits (142), Expect = 6e-10
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 29/127 (22%)
Frame = -1
Query: 588 MEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-------- 433
+E G+ E +N+I D+D R + Y + VLSGG+TMYPG+ R+++EI L
Sbjct: 273 VEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLEREIKQLYLERVLKG 332
Query: 432 -------------APST-----MKIKI-IAPP-ERKYSVWIGGSILAS-LSTFQQMWISK 316
P T K KI I P RK+ V++GG++LA + W+++
Sbjct: 333 DTSKLSSGMGMEQIPLTADYLLQKFKIRIEDPPRRKHMVFMGGAVLADIMKDKDSFWMTR 392
Query: 315 QEYDESG 295
+EY+E G
Sbjct: 393 KEYEEKG 399
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 52.4 bits (120), Expect = 3e-07
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Frame = -1
Query: 555 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS--------TMKIKIIA 400
+S++ C +D RK L N VL GGT M PG R+ +EI L S +K+
Sbjct: 64 DSLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDKLFIKTVKMHQ 123
Query: 399 PP-ERKYSVWIGGSILASLSTFQQMWISKQEYDE 301
PP + W+GG+I SL +++ Y +
Sbjct: 124 PPVNANITAWLGGAIFGSLEVLADRSTTRERYQQ 157
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 44.8 bits (101), Expect = 5e-05
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = -1
Query: 591 GMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 490
G + GIHE+ + SI KCD+D+R +L+ N VLSG
Sbjct: 2313 GRDIDGIHESIFKSIKKCDIDLRAELFHNIVLSG 2346
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = -1
Query: 552 SIMKCDVDIRKDLYANTVLSGGTTMYPG 469
+I K D+D+R+ LY+N VLSGG+T++ G
Sbjct: 264 AIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +2
Query: 359 IDPPIHTEYFLSGGAMILIFIVDGARAVISFCIRSAIPGYMV-VPPD-NTVLAYKSLRMS 532
+DPP+ +Y L+GG ++ + FCI G++V PP+ N+ + R++
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCI---FQGFVVPTPPECNSAIVLPDARIT 814
Query: 533 TS 538
S
Sbjct: 815 AS 816
>SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0)
Length = 1066
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 341 PSNRCGSRNRSTTSLAPPLYTGSASK--RTARRCLQQPAAGC 222
P N+ G++ R +L P++TGS + RT + P+A C
Sbjct: 879 PGNQAGNKTRPLRALRSPIHTGSTLEVDRTRQGTRPDPSARC 920
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 4.9
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 507 NTVLSGGTTMYPGIADRMQKEITALAP 427
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_8479| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = -2
Query: 374 GSVDRSSPPSLPSNRCGSRNRS----TTSLAPPLYTGSASKRTARRC 246
GS+ SP S P +R GSR R+ T+S A + +T ++C
Sbjct: 338 GSIAPPSPTSTPRSRTGSRTRTPPTPTSSRASSRGSARGGAKTTKKC 384
>SB_50207| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/37 (29%), Positives = 15/37 (40%)
Frame = -2
Query: 344 LPSNRCGSRNRSTTSLAPPLYTGSASKRTARRCLQQP 234
L C SR + P Y G RT ++C +P
Sbjct: 118 LVKRTCNSRKKKKPEKRPSSYNGDTDYRTRKQCRYEP 154
>SB_20112| Best HMM Match : EGF (HMM E-Value=0)
Length = 2112
Score = 27.5 bits (58), Expect = 8.6
Identities = 19/61 (31%), Positives = 23/61 (37%), Gaps = 3/61 (4%)
Frame = -2
Query: 359 SSPPSLPSNRCGSRNRSTTSLAPPLYTGSASKRTARRCLQQP---AAGCSIQACNLR*FN 189
SS P C R S + P YTGS + RC P A C +L F+
Sbjct: 684 SSDPCQHGGTCSDRIGSYSCYCRPGYTGSNCQHPLDRCANDPCRNGATCRRTGEDLSDFH 743
Query: 188 C 186
C
Sbjct: 744 C 744
>SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3287
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -2
Query: 365 DRSSPPSLPSNRCGSRNRSTTSLAPPLYTGSASKRTARRCLQQP 234
D +S P RC R S T P YTG+A C QP
Sbjct: 744 DCASNPCAAYQRCIDRIDSYTCACPLGYTGNACDVNIDECASQP 787
>SB_22697| Best HMM Match : Hirudin (HMM E-Value=3.2)
Length = 306
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = -3
Query: 550 HHEVRRGHP*GLVRQHRIVRWYHHVPWNRRPYAKGNHSSRPIDNED*DHCS-SREEVLRM 374
++EV G+P H + YH VP A G H P + H S S VLR
Sbjct: 205 YYEVPHGYPAAPHGYHEVPHGYHAVPHGYYEVAHGYHEV-PHGYHEVPHGSRSASWVLRS 263
Query: 373 DRWI 362
W+
Sbjct: 264 GSWV 267
>SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 386 STPYGSVDRSSPPSLPSNRCGSRNRSTTSLAPPLYTGSAS 267
STP +V PP PSN + ++ S +P T S S
Sbjct: 217 STPQATVQTPPPPPEPSNEPSTSSKPKASPSPSSITTSTS 256
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,331,528
Number of Sequences: 59808
Number of extensions: 393929
Number of successful extensions: 1083
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1080
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1427401750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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