Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_B01
         (780 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL592301-5|CAI13934.1| 2555|Homo sapiens Notch homolog 1, transl...    31   4.7  
AL354671-1|CAI16149.1| 2555|Homo sapiens Notch homolog 1, transl...    31   4.7  
AF308602-1|AAG33848.1| 2556|Homo sapiens NOTCH 1 protein.              31   4.7  
AB209873-1|BAD93110.1| 2067|Homo sapiens notch1 preproprotein va...    31   4.7  
BC052298-1|AAH52298.1|  237|Homo sapiens N-acetyltransferase 11 ...    30   8.1  
BC041617-1|AAH41617.1|  237|Homo sapiens N-acetyltransferase 11 ...    30   8.1  
AK023910-1|BAB14720.1|  237|Homo sapiens protein ( Homo sapiens ...    30   8.1  
AF259792-1|AAG36928.1| 1486|Homo sapiens p250R protein.                30   8.1  
AF212241-1|AAK14926.1|  609|Homo sapiens CDA02 protein.                30   8.1  

>AL592301-5|CAI13934.1| 2555|Homo sapiens Notch homolog 1,
            translocation-associated (Drosophila) protein.
          Length = 2555

 Score = 31.1 bits (67), Expect = 4.7
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = -1

Query: 714  FPTPSPESPDHWXXXXXXXXXXXXXXSDWSDRAALSPNDIQ 592
            F TPSPESPD W              SDWS+  +  P  +Q
Sbjct: 2509 FLTPSPESPDQW-----SSSSPHSNVSDWSEGVSSPPTSMQ 2544


>AL354671-1|CAI16149.1| 2555|Homo sapiens Notch homolog 1,
            translocation-associated (Drosophila) protein.
          Length = 2555

 Score = 31.1 bits (67), Expect = 4.7
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = -1

Query: 714  FPTPSPESPDHWXXXXXXXXXXXXXXSDWSDRAALSPNDIQ 592
            F TPSPESPD W              SDWS+  +  P  +Q
Sbjct: 2509 FLTPSPESPDQW-----SSSSPHSNVSDWSEGVSSPPTSMQ 2544


>AF308602-1|AAG33848.1| 2556|Homo sapiens NOTCH 1 protein.
          Length = 2556

 Score = 31.1 bits (67), Expect = 4.7
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = -1

Query: 714  FPTPSPESPDHWXXXXXXXXXXXXXXSDWSDRAALSPNDIQ 592
            F TPSPESPD W              SDWS+  +  P  +Q
Sbjct: 2510 FLTPSPESPDQW-----SSSSPHSNVSDWSEGVSSPPTSMQ 2545


>AB209873-1|BAD93110.1| 2067|Homo sapiens notch1 preproprotein variant
            protein.
          Length = 2067

 Score = 31.1 bits (67), Expect = 4.7
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = -1

Query: 714  FPTPSPESPDHWXXXXXXXXXXXXXXSDWSDRAALSPNDIQ 592
            F TPSPESPD W              SDWS+  +  P  +Q
Sbjct: 2021 FLTPSPESPDQW-----SSSSPHSNVSDWSEGVSSPPTSMQ 2056


>BC052298-1|AAH52298.1|  237|Homo sapiens N-acetyltransferase 11
           protein.
          Length = 237

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +3

Query: 318 RVNLKLSVSLLTCYTLQL*SVFRESRIGKYLSTVLNVYALST 443
           R +++    +L CY +QL S  R   +GK+L  +L + A ST
Sbjct: 125 RFDVECGDEVLYCYEVQLESKVRRKGLGKFLIQILQLMANST 166


>BC041617-1|AAH41617.1|  237|Homo sapiens N-acetyltransferase 11
           protein.
          Length = 237

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +3

Query: 318 RVNLKLSVSLLTCYTLQL*SVFRESRIGKYLSTVLNVYALST 443
           R +++    +L CY +QL S  R   +GK+L  +L + A ST
Sbjct: 125 RFDVECGDEVLYCYEVQLESKVRRKGLGKFLIQILQLMANST 166


>AK023910-1|BAB14720.1|  237|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13848 fis, clone THYRO1000855. ).
          Length = 237

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +3

Query: 318 RVNLKLSVSLLTCYTLQL*SVFRESRIGKYLSTVLNVYALST 443
           R +++    +L CY +QL S  R   +GK+L  +L + A ST
Sbjct: 125 RFDVECGDEVLYCYEVQLESKVRRKGLGKFLIQILQLMANST 166


>AF259792-1|AAG36928.1| 1486|Homo sapiens p250R protein.
          Length = 1486

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = -3

Query: 712 SDAVSRVPGPLVDPLPADTPH 650
           S++++ VPG L  P+PA TPH
Sbjct: 437 SNSMAEVPGDLKPPIPASTPH 457


>AF212241-1|AAK14926.1|  609|Homo sapiens CDA02 protein.
          Length = 609

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
 Frame = -1

Query: 630 WSDRAALSPNDIQQTNKGAEGIYI*YGRSVFTDST-FSKNALKRFKAAMYNK 478
           +S R  ++P+    T +G+EG+Y+  G   FT+ST F + + K  K  +++K
Sbjct: 19  FSFRDNMAPSTPLLTVRGSEGLYMVNGPPHFTESTVFPRESGKNCKVCIFSK 70


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,318,178
Number of Sequences: 237096
Number of extensions: 1773400
Number of successful extensions: 6808
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6808
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)