Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_A23
         (596 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    25   0.64 
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    24   1.1  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    23   1.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.9  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 24.6 bits (51), Expect = 0.64
 Identities = 10/48 (20%), Positives = 23/48 (47%)
 Frame = +2

Query: 182 VTLTAVNNASEVSDVHVTESGKKSLGIDGVTVNSRLPVFCCLLTSGML 325
           + +  +     ++D+ +     KS  I+GV+  + L + C L  + +L
Sbjct: 247 IIIVVITYVLNLTDLFLVYGMSKSRNIEGVSFGTNLVILCALWITTLL 294


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +3

Query: 345 SACSYPPTGAPPPKCCQKEA 404
           S C    TG PPP  C K +
Sbjct: 51  SDCDLDVTGTPPPLDCSKNS 70


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 477 GCDVNIEYELEQDHLVLTDVNITI 406
           GCD++I   + Q HL+L  V + +
Sbjct: 43  GCDLDIPNSVVQKHLILLMVLVNL 66


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
 Frame = -3

Query: 333  LIWSIPLVSKQQKTGSLEFTVTPSIPNDFFPLSVTWTSETSLALLTAVKVTQAEDGSPVD 154
            +I  I + S Q      EF      P D+  +   +TS   + L+      Q +    + 
Sbjct: 1055 IIDKIEMFSLQILNERAEFNAAGFFPIDYTLVFSKFTSSIRMLLI------QGQIFGLIT 1108

Query: 153  FS-PEXSFHARQIRVCLNEIISC 88
            F      F   +IR+C N +++C
Sbjct: 1109 FGCSNRCFFPSKIRICWNVLLNC 1131


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,205
Number of Sequences: 336
Number of extensions: 3132
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)