Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_A23
(596 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21309-2|AAN73882.1| 515|Caenorhabditis elegans Hypothetical pr... 89 3e-18
Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical pr... 31 0.62
AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical... 31 0.62
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 31 0.82
U29244-3|AAC71088.1| 363|Caenorhabditis elegans Hypothetical pr... 30 1.4
U39678-2|AAL16315.1| 133|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z70207-3|CAA94132.1| 336|Caenorhabditis elegans Hypothetical pr... 28 5.8
U39678-3|AAL16316.1| 137|Caenorhabditis elegans Hypothetical pr... 28 5.8
AF003386-13|AAB54250.1| 311|Caenorhabditis elegans Blistered cu... 28 5.8
>U21309-2|AAN73882.1| 515|Caenorhabditis elegans Hypothetical
protein C13B9.3 protein.
Length = 515
Score = 88.6 bits (210), Expect = 3e-18
Identities = 48/130 (36%), Positives = 77/130 (59%), Gaps = 2/130 (1%)
Frame = -3
Query: 495 PKASXGGCDVNIEYELEQDHLVLTDVNITIPLPSGNTSVVVHQWEGSYT-QKGRNLI-WS 322
P+ S G VNIEY L+++ + L +V I +PLP+ T+ V + +G Y K +N+I WS
Sbjct: 387 PQESSDGVQVNIEYTLQREDITLNNVRIIVPLPTA-TAPSVGECDGEYEYHKTKNVIVWS 445
Query: 321 IPLVSKQQKTGSLEFTVTPSIPNDFFPLSVTWTSETSLALLTAVKVTQAEDGSPVDFSPE 142
+ ++ +G+LEF+V + FFP+SV +TSE +T KV + DGSPV +S E
Sbjct: 446 LAVIDSSNSSGTLEFSVPNGHCDHFFPVSVGFTSENLFVPITVQKVVK-NDGSPVTYSVE 504
Query: 141 XSFHARQIRV 112
+F++ +
Sbjct: 505 TTFNSENFEI 514
>Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical
protein W04A8.7 protein.
Length = 1792
Score = 31.1 bits (67), Expect = 0.62
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -3
Query: 372 HQWEGSYTQKGRNLIWSIPLVSKQQKTGSLEFTVTPSIPNDFFPLS 235
H+ +G YT+K + ++ + KQ++ +E T+ ND F LS
Sbjct: 447 HRKDGQYTKKSKMILGQVQQRQKQEEDEQMESTMAQFTDNDPFNLS 492
>AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical
protein W04A8.7 protein.
Length = 1792
Score = 31.1 bits (67), Expect = 0.62
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -3
Query: 372 HQWEGSYTQKGRNLIWSIPLVSKQQKTGSLEFTVTPSIPNDFFPLS 235
H+ +G YT+K + ++ + KQ++ +E T+ ND F LS
Sbjct: 447 HRKDGQYTKKSKMILGQVQQRQKQEEDEQMESTMAQFTDNDPFNLS 492
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 30.7 bits (66), Expect = 0.82
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 306 CSRAECSR*GCVPSACSYPPTGAPPPK-CCQ 395
CS + CS +P AC PP PPPK CCQ
Sbjct: 56 CSSSCCSSQKPIPLACCPPP---PPPKPCCQ 83
>U29244-3|AAC71088.1| 363|Caenorhabditis elegans Hypothetical
protein ZK1248.7 protein.
Length = 363
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +1
Query: 256 GYRRSDGELKTPGFLLFAHERNAPDEVASLLRVATLPLVHHHRSVA 393
G+ G KTP + + A + NAP L T L HHH+ VA
Sbjct: 284 GHTTLQGTAKTPLYTILADDCNAP---MDRLEELTYTLCHHHQIVA 326
>U39678-2|AAL16315.1| 133|Caenorhabditis elegans Hypothetical
protein C39D10.8a protein.
Length = 133
Score = 28.7 bits (61), Expect = 3.3
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -3
Query: 477 GCDVNIEYELEQDHLVLTDVNITIPLPSGNTSVVVHQ-WEGSYTQKGRNLIWSIPLVSKQ 301
G N E+++E TD ITI SV+ H+ WEG Y Q R+ I +P + +
Sbjct: 71 GTTKNSEFKVEH-----TDNVITIRCKYRVQSVLAHETWEGEYIQYWRSEIGQMPKIIRD 125
Query: 300 Q 298
+
Sbjct: 126 E 126
>Z70207-3|CAA94132.1| 336|Caenorhabditis elegans Hypothetical
protein F15A2.3 protein.
Length = 336
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +2
Query: 284 RLPV-FCCLLTSGMLQMRLRPFCV*LPSH 367
R+PV +C L +G+L L PFCV +P +
Sbjct: 225 RIPVAYCKQLINGLLIQTLIPFCVYIPPY 253
>U39678-3|AAL16316.1| 137|Caenorhabditis elegans Hypothetical
protein C39D10.8b protein.
Length = 137
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -3
Query: 426 TDVNITIPLPSGNTSVVVHQ-WEGSYTQKGRNLIWSIPLVSKQQ 298
TD ITI SV+ H+ WEG Y Q R+ I +P + + +
Sbjct: 87 TDNVITIRCKYRVQSVLAHETWEGEYIQYWRSEIGQMPKIIRDE 130
>AF003386-13|AAB54250.1| 311|Caenorhabditis elegans Blistered
cuticle protein 2 protein.
Length = 311
Score = 27.9 bits (59), Expect = 5.8
Identities = 9/43 (20%), Positives = 26/43 (60%)
Frame = +1
Query: 334 VASLLRVATLPLVHHHRSVARRKRYGDIDICQHQVILLQLVFD 462
V++L + +PL++++ + + +ID C+H+ + L + ++
Sbjct: 26 VSTLTCIIAIPLLYNYMQHVQTNLHSEIDFCRHRTVGLFIQYE 68
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,100,842
Number of Sequences: 27780
Number of extensions: 316988
Number of successful extensions: 918
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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