Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_A23
         (596 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    26   0.24 
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    24   0.98 
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    24   0.98 
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   9.2  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   9.2  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 16/52 (30%), Positives = 23/52 (44%)
 Frame = -2

Query: 418 QYHHTASFWQHFGGGAPVGG*LHAEGTQPHLEHSAREQTTENRES*VHRHSV 263
           +YHH A    H    AP+     A G  PH    A   +T + +  +HR S+
Sbjct: 509 EYHHVAPPSGHHASSAPLLAATLAGGLCPH-RRRANSGSTSSGDDELHRASL 559


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -3

Query: 315 LVSKQQKTGSLEFTVTPSIPNDFFPLSVTWTSETSLALL 199
           LVS Q K  S E  +       FF   + WT   ++AL+
Sbjct: 266 LVSNQDKERSAEVRIAKVAFTIFFLFLLAWTPYATVALI 304


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -3

Query: 315 LVSKQQKTGSLEFTVTPSIPNDFFPLSVTWTSETSLALL 199
           LVS Q K  S E  +       FF   + WT   ++AL+
Sbjct: 266 LVSNQDKERSAEVRIAKVAFTIFFLFLLAWTPYATVALI 304


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -3

Query: 369 QWEGSYTQKGRNLIWSI 319
           +W   Y++KG N++ +I
Sbjct: 349 KWHNIYSEKGLNILGNI 365


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -3

Query: 369 QWEGSYTQKGRNLIWSI 319
           +W   Y++KG N++ +I
Sbjct: 349 KWHNIYSEKGLNILGNI 365


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,392
Number of Sequences: 438
Number of extensions: 3478
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)