Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_A21
         (628 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75529-5|CAA99784.1|  610|Caenorhabditis elegans Hypothetical pr...    28   4.8  
AF098996-6|AAC68709.1|  481|Caenorhabditis elegans Hypothetical ...    28   4.8  

>Z75529-5|CAA99784.1|  610|Caenorhabditis elegans Hypothetical
           protein C44H9.6 protein.
          Length = 610

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = +3

Query: 87  LAPT-LSKNHLHXSXQRGHVFCTQTMADFSSDMSKLTAVN 203
           L PT LSK H + + Q GH FC   + + +  M    + N
Sbjct: 60  LIPTNLSKGHRYTAQQNGHSFCHSYLQNITETMGADESTN 99


>AF098996-6|AAC68709.1|  481|Caenorhabditis elegans Hypothetical
           protein T11F1.2 protein.
          Length = 481

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 141 VFCTQTMADFSSDMSKLTAVNSCHSPMNFDH 233
           +F +  MADF+ D+ KLT  + C     F++
Sbjct: 44  LFLSCVMADFNYDLEKLTLTHKCDPQCTFNY 74


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,584,763
Number of Sequences: 27780
Number of extensions: 205313
Number of successful extensions: 287
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 287
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)