Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_A20
         (644 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q240U5 Cluster: Putative uncharacterized protein; n=1; ...    36   1.1  
UniRef50_Q234H4 Cluster: Putative uncharacterized protein; n=1; ...    33   4.5  
UniRef50_A0NC36 Cluster: ENSANGP00000030345; n=1; Anopheles gamb...    33   4.5  
UniRef50_UPI000066046C Cluster: Homolog of Homo sapiens "Splice ...    33   5.9  
UniRef50_Q6BHW5 Cluster: Similarity; n=1; Debaryomyces hansenii|...    33   5.9  
UniRef50_A5KCD8 Cluster: Putative uncharacterized protein; n=7; ...    33   7.8  

>UniRef50_Q240U5 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 246

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 16/27 (59%), Positives = 20/27 (74%)
 Frame = -2

Query: 580 KFLNEQNQESCHNVSVNMRNTIKYNII 500
           KFLNEQNQ+S +  + N+RNT K N I
Sbjct: 116 KFLNEQNQQSEYESNTNLRNTNKSNTI 142


>UniRef50_Q234H4 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 938

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +3

Query: 204 LLITLNKSPYIYYFVLFIFHSKLLSLFETVVRIQLLN-LYYI 326
           LL +LN +PYIYY++  IF    LS+F   +    +N L YI
Sbjct: 241 LLYSLNLNPYIYYYIDSIFLPYKLSIFMFTISALFINKLIYI 282


>UniRef50_A0NC36 Cluster: ENSANGP00000030345; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000030345 - Anopheles gambiae
           str. PEST
          Length = 187

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 14/55 (25%), Positives = 29/55 (52%)
 Frame = +3

Query: 204 LLITLNKSPYIYYFVLFIFHSKLLSLFETVVRIQLLNLYYI*IMPNLEIVKCTAI 368
           LL  LN    ++Y + F+F+   + LF T++ + +   Y++    ++E + C  I
Sbjct: 1   LLFALNMYFGLFYLICFLFYILFVGLFYTLLLLNIFIFYFVRFDSSMESINCFII 55


>UniRef50_UPI000066046C Cluster: Homolog of Homo sapiens "Splice
           Isoform 1 of Netrin G2 precursor; n=1; Takifugu
           rubripes|Rep: Homolog of Homo sapiens "Splice Isoform 1
           of Netrin G2 precursor - Takifugu rubripes
          Length = 515

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = +2

Query: 161 SSTVCIMYSSTKIISINNFE*IPIHI--LFCTFYFSFKIIITI*DSSQNTTFKPLLYLNY 334
           ++ +CI + ST  + INN   IP+H+   FC  + +F  I+   D   N       Y+++
Sbjct: 337 TANICIYHKSTGKMLINNQSKIPLHLRPFFCNLFSAFLSIVLCPDCECNDHSSRCSYIDF 396


>UniRef50_Q6BHW5 Cluster: Similarity; n=1; Debaryomyces
           hansenii|Rep: Similarity - Debaryomyces hansenii (Yeast)
           (Torulaspora hansenii)
          Length = 600

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 18/68 (26%), Positives = 37/68 (54%)
 Frame = -3

Query: 249 VQNNICMGIYSKLLIEIIFVEEYMIHTVDENQFLIVEVFKVFSFSILPAKLNV*KIFLLA 70
           + ++IC+   + ++   +FV+ Y  +T D NQ  I  +F++F  +I        K+F++ 
Sbjct: 461 IVSSICVNERNNIIDFQLFVDNYFGYTYDSNQISIDPIFEMFGVTITEFSA---KLFII- 516

Query: 69  YSIFPCNH 46
             +F CN+
Sbjct: 517 --LFNCNY 522


>UniRef50_A5KCD8 Cluster: Putative uncharacterized protein; n=7;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 1171

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
 Frame = +3

Query: 237  YYFVLFIFHSKLLSLFETVVRIQLLNLYYI*IMPNLEIVKCTAIKKLCI--TDQRIRQMD 410
            Y+  LFIF   +LSL    +R+ +L  YY   +P+  +   T I  L I  T++ +++++
Sbjct: 1089 YFSCLFIF--LILSLLYVALRVYMLPPYYAVQLPDATLGILTVIFSLIILATNETLKRVE 1146

Query: 411  VRVSTH 428
             R+ T+
Sbjct: 1147 ARIKTN 1152


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 554,401,216
Number of Sequences: 1657284
Number of extensions: 10351013
Number of successful extensions: 20593
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20571
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48541014171
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)