Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_A19
         (340 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6C746 Cluster: Yarrowia lipolytica chromosome E of str...    31   6.7  
UniRef50_A6DLN2 Cluster: Putative uncharacterized protein; n=1; ...    30   8.8  

>UniRef50_Q6C746 Cluster: Yarrowia lipolytica chromosome E of strain
           CLIB 122 of Yarrowia lipolytica; n=1; Yarrowia
           lipolytica|Rep: Yarrowia lipolytica chromosome E of
           strain CLIB 122 of Yarrowia lipolytica - Yarrowia
           lipolytica (Candida lipolytica)
          Length = 899

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 16/29 (55%), Positives = 18/29 (62%)
 Frame = -2

Query: 273 QIRRFLRSIGRVSGRSKP*GSAGTSSAIS 187
           Q RR L SIG  SGRS P G +  SS+ S
Sbjct: 699 QSRRSLNSIGGASGRSSPRGRSSRSSSAS 727


>UniRef50_A6DLN2 Cluster: Putative uncharacterized protein; n=1;
           Lentisphaera araneosa HTCC2155|Rep: Putative
           uncharacterized protein - Lentisphaera araneosa HTCC2155
          Length = 364

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +3

Query: 159 INVVQARVWEKLRSWFRRCLRVW 227
           I V+ ++ WE+LR W ++C   W
Sbjct: 126 IPVMNSKYWEQLRPWLKKCSYAW 148


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 290,647,308
Number of Sequences: 1657284
Number of extensions: 4231022
Number of successful extensions: 10442
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10441
length of database: 575,637,011
effective HSP length: 88
effective length of database: 429,796,019
effective search space used: 10315104456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)