Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_A18
         (603 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   4.6  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    22   4.6  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      22   4.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   6.1  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    21   8.0  

>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 6/52 (11%)
 Frame = -3

Query: 256 WSTITTLSTTPSYSAKGL------RTFITFYPRCHPPLASPFRAFWPMIRLT 119
           WS      +TP+Y  +GL       T  +F     PP  +P  A +  + ++
Sbjct: 178 WSATPQAGSTPTYQTQGLLSPSYGGTTYSFTADFRPPQETPVLASYKSVPMS 229


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 11/21 (52%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
 Frame = +1

Query: 346 IVEMTL-NDCPGEPGDFPHLV 405
           IVEM   N+ PG P DF   V
Sbjct: 314 IVEMMRKNETPGMPNDFEEFV 334


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 11/21 (52%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
 Frame = +1

Query: 346 IVEMTL-NDCPGEPGDFPHLV 405
           IVEM   N+ PG P DF   V
Sbjct: 314 IVEMMRKNETPGMPNDFEEFV 334


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 254 VYHHNAKYDSK 222
           +Y+H A YDSK
Sbjct: 166 LYNHTANYDSK 176


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 464 KSPGSPAGRSMQSMHLN*SATRCGK 390
           K P SP GR ++ +  +   T C K
Sbjct: 63  KGPCSPEGRELKKILPDALVTNCSK 87


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,169
Number of Sequences: 336
Number of extensions: 3558
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)