Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_A18
         (603 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D84239-1|BAA19526.1| 5405|Homo sapiens IgG Fc binding protein pr...    31   3.1  
AC007842-1|AAD39266.1| 2843|Homo sapiens Human Fc gamma BP [AA 1...    31   3.1  
AY183123-1|AAO66337.1|  625|Homo sapiens truncated Rho GTPase-ac...    29   9.5  

>D84239-1|BAA19526.1| 5405|Homo sapiens IgG Fc binding protein
            protein.
          Length = 5405

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
 Frame = -3

Query: 529  RPAGMLN*GKLGCGMCVS*GVESPQAPQQAEVC---KACISISQQPGVESP 386
            +PAG    G  GCG CVS    SP  P+Q E      AC  IS   G  +P
Sbjct: 2228 KPAGWQVGGAQGCGECVSKPCPSPCTPEQQESFGGPDACGVISATDGPLAP 2278



 Score = 31.1 bits (67), Expect = 3.1
 Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
 Frame = -3

Query: 529  RPAGMLN*GKLGCGMCVS*GVESPQAPQQAEVC---KACISISQQPGVESP 386
            +PAG    G  GCG CVS    SP  P+Q E      AC  IS   G  +P
Sbjct: 3429 KPAGWQVGGAQGCGECVSKPCPSPCTPEQQESFGGPDACGVISATDGPLAP 3479



 Score = 31.1 bits (67), Expect = 3.1
 Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
 Frame = -3

Query: 529  RPAGMLN*GKLGCGMCVS*GVESPQAPQQAEVC---KACISISQQPGVESP 386
            +PAG    G  GCG CVS    SP  P+Q E      AC  IS   G  +P
Sbjct: 4630 KPAGWQVGGAQGCGECVSKPCPSPCTPEQQESFGGPDACGVISATDGPLAP 4680


>AC007842-1|AAD39266.1| 2843|Homo sapiens Human Fc gamma BP [AA
            1-2843] protein.
          Length = 2843

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
 Frame = -3

Query: 529  RPAGMLN*GKLGCGMCVS*GVESPQAPQQAEVC---KACISISQQPGVESP 386
            +PAG    G  GCG CVS    SP  P+Q E      AC  IS   G  +P
Sbjct: 2228 KPAGWQVGGAQGCGECVSKPCPSPCTPEQQESFGGPDACGVISATDGPLAP 2278


>AY183123-1|AAO66337.1|  625|Homo sapiens truncated Rho
           GTPase-activating protein 4 splice form 2 protein.
          Length = 625

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = -3

Query: 262 DLWSTITTLSTTPSYSAKGLRTFITFYPRCHPPLASPFRAFWPMIRLTPPLPLTSLQ 92
           DL+  +   S TPS+ A G     ++ PRC P     +R  W   RL P LP  + Q
Sbjct: 570 DLFGELLASSGTPSWRAWGRTMSRSWKPRC-PHRRMTWRGSW---RLWPALPTRAAQ 622


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,198,845
Number of Sequences: 237096
Number of extensions: 2459243
Number of successful extensions: 9133
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9132
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)