Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_A18
(603 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-2651|AAN11763.1| 527|Drosophila melanogaster CG32152-P... 30 2.1
Y10074-4|CAA71166.1| 542|Drosophila melanogaster lethal(2)relat... 29 3.7
Y10074-3|CAA71165.1| 542|Drosophila melanogaster lethal(2)relat... 29 3.7
X95245-1|CAA64534.1| 542|Drosophila melanogaster Rot57 protein ... 29 3.7
X98094-3|CAA66722.1| 542|Drosophila melanogaster lethal(2)relat... 29 6.4
X95246-1|CAA64535.1| 544|Drosophila melanogaster Rot57 protein ... 29 6.4
X95241-3|CAA64530.1| 542|Drosophila melanogaster l(2)rot protein. 29 6.4
X77821-1|CAA54836.1| 542|Drosophila melanogaster Rot(57) protein. 29 6.4
BT023852-1|AAZ86773.1| 146|Drosophila melanogaster IP13646p pro... 29 6.4
AE013599-1757|AAF58345.1| 607|Drosophila melanogaster CG6209-PA... 29 6.4
>AE014296-2651|AAN11763.1| 527|Drosophila melanogaster CG32152-PA
protein.
Length = 527
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = -3
Query: 193 ITFYPRCHPPLASPFRAFWPMIRLTPPLPLTSLQGGIGFTFVNLRMKSERGNKLN 29
+ F C+P L SPF++ W L P ++ I +T NL+ K+ + NK N
Sbjct: 419 LNFKLSCNPCLKSPFKSLWMQSVLFVEQPFV-MRKNIHYT-GNLKFKTLKPNKFN 471
>Y10074-4|CAA71166.1| 542|Drosophila melanogaster lethal(2)relative
of tid protein.
Length = 542
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 295 HSTITTAARTNIMI-CSFIVEMTLNDCPGEPGDFPHLVAD*LRCMLCILLPAGEPGDFP 468
H+ I A RT++ F +++T DC G GD+ LRC+L + + D P
Sbjct: 86 HNLIKLAHRTHVYFNYEFKLQVTFRDCIGRSGDY-------LRCLLTAVFAIRDSVDLP 137
>Y10074-3|CAA71165.1| 542|Drosophila melanogaster lethal(2)relative
of tid protein.
Length = 542
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 295 HSTITTAARTNIMI-CSFIVEMTLNDCPGEPGDFPHLVAD*LRCMLCILLPAGEPGDFP 468
H+ I A RT++ F +++T DC G GD+ LRC+L + + D P
Sbjct: 86 HNLIKLAHRTHVYFNYEFKLQVTFRDCIGRSGDY-------LRCLLTAVFAIRDSVDLP 137
>X95245-1|CAA64534.1| 542|Drosophila melanogaster Rot57 protein
protein.
Length = 542
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 295 HSTITTAARTNIMI-CSFIVEMTLNDCPGEPGDFPHLVAD*LRCMLCILLPAGEPGDFP 468
H+ I A RT++ F +++T DC G GD+ LRC+L + + D P
Sbjct: 86 HNLIKLAHRTHVYFNYEFKLQVTFRDCIGRSGDY-------LRCLLTAVFAIRDSVDLP 137
>X98094-3|CAA66722.1| 542|Drosophila melanogaster lethal(2)relative
of tid protein.
Length = 542
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 295 HSTITTAARTNIMI-CSFIVEMTLNDCPGEPGDFPHLVAD*LRCMLCILLPAGEPGDFP 468
H I A RT++ F +++T DC G GD+ LRC+L + + D P
Sbjct: 86 HHLIKLAHRTHVYFNYEFKLQVTFRDCIGRSGDY-------LRCLLTAVFAIRDSVDLP 137
>X95246-1|CAA64535.1| 544|Drosophila melanogaster Rot57 protein
protein.
Length = 544
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 295 HSTITTAARTNIMI-CSFIVEMTLNDCPGEPGDFPHLVAD*LRCMLCILLPAGEPGDFP 468
H I A RT++ F +++T DC G GD+ LRC+L + + D P
Sbjct: 86 HHLIKLAHRTHVYFNYEFKLQVTFRDCIGRSGDY-------LRCLLTAVFAIRDSVDLP 137
>X95241-3|CAA64530.1| 542|Drosophila melanogaster l(2)rot protein.
Length = 542
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 295 HSTITTAARTNIMI-CSFIVEMTLNDCPGEPGDFPHLVAD*LRCMLCILLPAGEPGDFP 468
H I A RT++ F +++T DC G GD+ LRC+L + + D P
Sbjct: 86 HHLIKLAHRTHVYFNYEFKLQVTFRDCIGRSGDY-------LRCLLTAVFAIRDSVDLP 137
>X77821-1|CAA54836.1| 542|Drosophila melanogaster Rot(57) protein.
Length = 542
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 295 HSTITTAARTNIMI-CSFIVEMTLNDCPGEPGDFPHLVAD*LRCMLCILLPAGEPGDFP 468
H I A RT++ F +++T DC G GD+ LRC+L + + D P
Sbjct: 86 HHLIKLAHRTHVYFNYEFKLQVTFRDCIGRSGDY-------LRCLLTAVFAIRDSVDLP 137
>BT023852-1|AAZ86773.1| 146|Drosophila melanogaster IP13646p
protein.
Length = 146
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -2
Query: 287 LFVGTNINRPMVYHHNAKYDSKLFRKRVENLHYV 186
+F+G +++R + YH ++LF K NLH+V
Sbjct: 2 VFLGRHLSRSLAYHLKQPSWNRLFLKPRTNLHHV 35
>AE013599-1757|AAF58345.1| 607|Drosophila melanogaster CG6209-PA
protein.
Length = 607
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -2
Query: 287 LFVGTNINRPMVYHHNAKYDSKLFRKRVENLHYV 186
+F+G +++R + YH ++LF K NLH+V
Sbjct: 2 VFLGRHLSRSLAYHLKQPSWNRLFLKPRTNLHHV 35
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,450,447
Number of Sequences: 53049
Number of extensions: 680212
Number of successful extensions: 1801
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1801
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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