Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_A18
         (603 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78419-7|CAC42290.1| 1601|Caenorhabditis elegans Hypothetical pr...    29   1.9  
AF159144-1|AAF80368.1| 1601|Caenorhabditis elegans RRF-1 protein.      29   1.9  
AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical ...    28   4.5  
U80453-4|AAK31441.2|  674|Caenorhabditis elegans Trehalase prote...    28   5.9  
AJ512339-1|CAD54512.1|  674|Caenorhabditis elegans trehalase pro...    28   5.9  
Z83244-4|CAB54314.1|  562|Caenorhabditis elegans Hypothetical pr...    27   7.8  
Z22179-17|CAA80171.2|  691|Caenorhabditis elegans Hypothetical p...    27   7.8  
Z22173-3|CAA80127.2|  691|Caenorhabditis elegans Hypothetical pr...    27   7.8  
U28739-7|AAB93458.1|  681|Caenorhabditis elegans Cell division c...    27   7.8  
U28739-6|AAM54206.1|  695|Caenorhabditis elegans Cell division c...    27   7.8  
U28739-5|AAT68903.1|  707|Caenorhabditis elegans Cell division c...    27   7.8  
U28739-4|AAM54205.1|  693|Caenorhabditis elegans Cell division c...    27   7.8  
U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division c...    27   7.8  
AY661747-1|AAT74546.1|  707|Caenorhabditis elegans CDC-14 phosph...    27   7.8  
AY661746-1|AAT74545.1|  695|Caenorhabditis elegans CDC-14 phosph...    27   7.8  
AY661745-1|AAT74544.1|  681|Caenorhabditis elegans CDC-14 phosph...    27   7.8  
AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14 phosph...    27   7.8  
AY661743-1|AAT74542.1|  693|Caenorhabditis elegans CDC-14 phosph...    27   7.8  
AF000363-1|AAB94407.1|  681|Caenorhabditis elegans protein phosp...    27   7.8  

>Z78419-7|CAC42290.1| 1601|Caenorhabditis elegans Hypothetical protein
            F26A3.8 protein.
          Length = 1601

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -1

Query: 387  PRLPRTIVQSHFDNETANHYISPRRCG 307
            P  P  I   H  NE +  Y+SPR CG
Sbjct: 1063 PENPERIPDFHMGNERSPMYVSPRLCG 1089


>AF159144-1|AAF80368.1| 1601|Caenorhabditis elegans RRF-1 protein.
          Length = 1601

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -1

Query: 387  PRLPRTIVQSHFDNETANHYISPRRCG 307
            P  P  I   H  NE +  Y+SPR CG
Sbjct: 1063 PENPERIPDFHMGNERSPMYVSPRLCG 1089


>AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical
            protein Y75B7AL.4a protein.
          Length = 1126

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 14/53 (26%), Positives = 27/53 (50%)
 Frame = -2

Query: 203  ENLHYVLPQVPSTIGKSIQGILAYDKTHTTASANITTRWNRIHFRQSPYEERT 45
            +   + LPQ+P    K +  +LA   TH++ S  ++   NR + R++   + T
Sbjct: 912  DETQFKLPQLPMPPKKKVSPLLARQATHSSKSTTLSVP-NRANLRETKSIDET 963


>U80453-4|AAK31441.2|  674|Caenorhabditis elegans Trehalase protein
           5 protein.
          Length = 674

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = -3

Query: 283 SSVPISIDLWSTITTLSTTPSYSAKGLRTFITFY 182
           SS  + ID+ +TITT S++ ++    + T IT +
Sbjct: 636 SSTSLPIDITTTITTSSSSSTFGYSNILTLITVF 669


>AJ512339-1|CAD54512.1|  674|Caenorhabditis elegans trehalase
           protein.
          Length = 674

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = -3

Query: 283 SSVPISIDLWSTITTLSTTPSYSAKGLRTFITFY 182
           SS  + ID+ +TITT S++ ++    + T IT +
Sbjct: 636 SSTSLPIDITTTITTSSSSSTFGYSNILTLITVF 669


>Z83244-4|CAB54314.1|  562|Caenorhabditis elegans Hypothetical
           protein W06F12.2a protein.
          Length = 562

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 537 RIMVIAVSCVNGEWDAPCXGA 599
           R++ +A S +  EWD PC GA
Sbjct: 44  RVVTMAQSNLQCEWDCPCVGA 64


>Z22179-17|CAA80171.2|  691|Caenorhabditis elegans Hypothetical
           protein F58A4.11 protein.
          Length = 691

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 17/69 (24%), Positives = 35/69 (50%)
 Frame = -2

Query: 266 NRPMVYHHNAKYDSKLFRKRVENLHYVLPQVPSTIGKSIQGILAYDKTHTTASANITTRW 87
           N+  +   +A ++ +LF++ + NL+ V PQ+P  I   +    +   T  +A +  +T  
Sbjct: 130 NQNTINMMSAAFNQQLFKQTLANLNTVTPQLPVNIPTGLPMPASPCTTAASAPSVESTPT 189

Query: 86  NRIHFRQSP 60
            R   R++P
Sbjct: 190 KRKRQRRNP 198


>Z22173-3|CAA80127.2|  691|Caenorhabditis elegans Hypothetical
           protein F58A4.11 protein.
          Length = 691

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 17/69 (24%), Positives = 35/69 (50%)
 Frame = -2

Query: 266 NRPMVYHHNAKYDSKLFRKRVENLHYVLPQVPSTIGKSIQGILAYDKTHTTASANITTRW 87
           N+  +   +A ++ +LF++ + NL+ V PQ+P  I   +    +   T  +A +  +T  
Sbjct: 130 NQNTINMMSAAFNQQLFKQTLANLNTVTPQLPVNIPTGLPMPASPCTTAASAPSVESTPT 189

Query: 86  NRIHFRQSP 60
            R   R++P
Sbjct: 190 KRKRQRRNP 198


>U28739-7|AAB93458.1|  681|Caenorhabditis elegans Cell division
           cycle related protein14, isoform c protein.
          Length = 681

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -3

Query: 487 MCVS*GVESPQAPQQAEVCKACISISQQPGVESPQAPQDNRS 362
           +C    V  PQ P   E  K C S+SQ  GV   Q  ++ R+
Sbjct: 327 VCRPGSVIGPQQPYLIEKQKFCWSLSQSNGVHLTQNKEEKRN 368


>U28739-6|AAM54206.1|  695|Caenorhabditis elegans Cell division
           cycle related protein14, isoform d protein.
          Length = 695

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -3

Query: 487 MCVS*GVESPQAPQQAEVCKACISISQQPGVESPQAPQDNRS 362
           +C    V  PQ P   E  K C S+SQ  GV   Q  ++ R+
Sbjct: 327 VCRPGSVIGPQQPYLIEKQKFCWSLSQSNGVHLTQNKEEKRN 368


>U28739-5|AAT68903.1|  707|Caenorhabditis elegans Cell division
           cycle related protein14, isoform e protein.
          Length = 707

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -3

Query: 487 MCVS*GVESPQAPQQAEVCKACISISQQPGVESPQAPQDNRS 362
           +C    V  PQ P   E  K C S+SQ  GV   Q  ++ R+
Sbjct: 327 VCRPGSVIGPQQPYLIEKQKFCWSLSQSNGVHLTQNKEEKRN 368


>U28739-4|AAM54205.1|  693|Caenorhabditis elegans Cell division
           cycle related protein14, isoform a protein.
          Length = 693

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -3

Query: 487 MCVS*GVESPQAPQQAEVCKACISISQQPGVESPQAPQDNRS 362
           +C    V  PQ P   E  K C S+SQ  GV   Q  ++ R+
Sbjct: 327 VCRPGSVIGPQQPYLIEKQKFCWSLSQSNGVHLTQNKEEKRN 368


>U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division
           cycle related protein14, isoform b protein.
          Length = 1063

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -3

Query: 487 MCVS*GVESPQAPQQAEVCKACISISQQPGVESPQAPQDNRS 362
           +C    V  PQ P   E  K C S+SQ  GV   Q  ++ R+
Sbjct: 327 VCRPGSVIGPQQPYLIEKQKFCWSLSQSNGVHLTQNKEEKRN 368


>AY661747-1|AAT74546.1|  707|Caenorhabditis elegans CDC-14
           phosphatase isoform E protein.
          Length = 707

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -3

Query: 487 MCVS*GVESPQAPQQAEVCKACISISQQPGVESPQAPQDNRS 362
           +C    V  PQ P   E  K C S+SQ  GV   Q  ++ R+
Sbjct: 327 VCRPGSVIGPQQPYLIEKQKFCWSLSQSNGVHLTQNKEEKRN 368


>AY661746-1|AAT74545.1|  695|Caenorhabditis elegans CDC-14
           phosphatase isoform D protein.
          Length = 695

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -3

Query: 487 MCVS*GVESPQAPQQAEVCKACISISQQPGVESPQAPQDNRS 362
           +C    V  PQ P   E  K C S+SQ  GV   Q  ++ R+
Sbjct: 327 VCRPGSVIGPQQPYLIEKQKFCWSLSQSNGVHLTQNKEEKRN 368


>AY661745-1|AAT74544.1|  681|Caenorhabditis elegans CDC-14
           phosphatase isoform C protein.
          Length = 681

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -3

Query: 487 MCVS*GVESPQAPQQAEVCKACISISQQPGVESPQAPQDNRS 362
           +C    V  PQ P   E  K C S+SQ  GV   Q  ++ R+
Sbjct: 327 VCRPGSVIGPQQPYLIEKQKFCWSLSQSNGVHLTQNKEEKRN 368


>AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14
           phosphatase isoform B protein.
          Length = 1063

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -3

Query: 487 MCVS*GVESPQAPQQAEVCKACISISQQPGVESPQAPQDNRS 362
           +C    V  PQ P   E  K C S+SQ  GV   Q  ++ R+
Sbjct: 327 VCRPGSVIGPQQPYLIEKQKFCWSLSQSNGVHLTQNKEEKRN 368


>AY661743-1|AAT74542.1|  693|Caenorhabditis elegans CDC-14
           phosphatase isoform A protein.
          Length = 693

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -3

Query: 487 MCVS*GVESPQAPQQAEVCKACISISQQPGVESPQAPQDNRS 362
           +C    V  PQ P   E  K C S+SQ  GV   Q  ++ R+
Sbjct: 327 VCRPGSVIGPQQPYLIEKQKFCWSLSQSNGVHLTQNKEEKRN 368


>AF000363-1|AAB94407.1|  681|Caenorhabditis elegans protein
           phosphatase CDC14 protein.
          Length = 681

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -3

Query: 487 MCVS*GVESPQAPQQAEVCKACISISQQPGVESPQAPQDNRS 362
           +C    V  PQ P   E  K C S+SQ  GV   Q  ++ R+
Sbjct: 327 VCRPGSVIGPQQPYLIEKQKFCWSLSQSNGVHLTQNKEEKRN 368


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,808,456
Number of Sequences: 27780
Number of extensions: 346709
Number of successful extensions: 924
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)