Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_A18
         (603 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   1.3  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   9.3  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   9.3  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   9.3  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = -3

Query: 466  ESPQAPQQAEVCKACISISQQPGVESPQAPQDNRSESFRQ 347
            + PQ  QQ +  +     SQQP  + PQ  Q  + +  +Q
Sbjct: 1503 QQPQQQQQQQQQQQPQQQSQQPQQQQPQPQQQQQQQQQQQ 1542


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 330 YISPRRCGDRRMRSP 286
           YI+   CGD R+ SP
Sbjct: 366 YINTAPCGDARIFSP 380


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/38 (21%), Positives = 17/38 (44%)
 Frame = -1

Query: 522 QACLIKGSLAVECVSVRVWKVPRLPSRQKYAKHASQLV 409
           Q C+    +A++ V   VW +   P  + +     Q++
Sbjct: 627 QVCIAAALIALQIVLTLVWMIIEPPGTRFFYPDRKQVI 664


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/38 (21%), Positives = 17/38 (44%)
 Frame = -1

Query: 522 QACLIKGSLAVECVSVRVWKVPRLPSRQKYAKHASQLV 409
           Q C+    +A++ V   VW +   P  + +     Q++
Sbjct: 717 QVCIAAALIALQIVLTLVWMIIEPPGTRFFYPDRKQVI 754


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,525
Number of Sequences: 438
Number of extensions: 4058
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)