Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_A17
         (807 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    31   0.011
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    24   1.2  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   3.8  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   3.8  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   5.0  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   8.7  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   8.7  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   8.7  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   8.7  

>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 31.1 bits (67), Expect = 0.011
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -3

Query: 607 KERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDT 482
           KE  ++ +RH   K+  D E L+ K+ P+ Q   +YE  V T
Sbjct: 82  KETAEKVIRHLTQKRARDWERLSKKYDPQGQYKKRYEEHVAT 123


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 578 QSSQEGSRPRSAHRQAPAQNS 516
           QSS+   RPRS+ + AP + +
Sbjct: 232 QSSESSLRPRSSQKSAPGKRT 252


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
 Frame = +3

Query: 678 TMHSQSSWA-----FCRSLSTERPSMVSGLMRMDREIFFS 782
           T+ SQS++      F  +L+ +   +   L+RMDR+I +S
Sbjct: 149 TLASQSAYVQQDDLFIGTLTVKEHLIFQALLRMDRDISYS 188


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
 Frame = +3

Query: 678 TMHSQSSWA-----FCRSLSTERPSMVSGLMRMDREIFFS 782
           T+ SQS++      F  +L+ +   +   L+RMDR+I +S
Sbjct: 149 TLASQSAYVQQDDLFIGTLTVKEHLIFQALLRMDRDISYS 188


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 14/56 (25%), Positives = 25/56 (44%)
 Frame = -3

Query: 541 TGKHPPKIQVASKYERRVDTRSYDDKKKLFEGDLEKLNKDFLEKVWQERAEQFGGR 374
           TG+   K +  S ++   D     D  K+     +++ +    K +   A+QFGGR
Sbjct: 500 TGRVGNKGKATSFFDEDQDRNLASDLAKILSQAKQEIPEWLGSKSYGGSADQFGGR 555


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 93 SYSFVTNPLTYCYYNMNK 40
          SY+F+    TY YY  N+
Sbjct: 23 SYNFLQEKTTYEYYENNQ 40


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -3

Query: 406 WQERAEQFGGRQKARLPKWFGERPGK 329
           + +R +  G R  A  P W  + PGK
Sbjct: 556 FSDRLKSRGIRTAAIWPLWCSQNPGK 581


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = -2

Query: 740 HRGSLRRQTPTEGPGTLGVHRQTRDREIRSRREAKE--TGLRLKRAQRK 600
           H+ + + +TP      L + ++ RD++  S  E  E  + LRL   Q K
Sbjct: 112 HKPNRKPRTPFTTQQLLALEKKFRDKQYLSIAERAEFSSSLRLTEPQVK 160


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 93 SYSFVTNPLTYCYYNMNK 40
          SY+F+    TY YY  N+
Sbjct: 14 SYNFLQEKTTYEYYENNQ 31


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,709
Number of Sequences: 336
Number of extensions: 2039
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21999028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)