Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_A17
         (807 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    30   0.097
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    28   0.29 
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            27   0.90 
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    27   0.90 
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        26   1.6  
AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription fact...    25   3.6  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    25   3.6  
AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    25   3.6  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   6.3  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    24   6.3  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 29.9 bits (64), Expect = 0.097
 Identities = 17/98 (17%), Positives = 40/98 (40%)
 Frame = -2

Query: 788 GRGEEDLPVHPHQAADHRGSLRRQTPTEGPGTLGVHRQTRDREIRSRREAKETGLRLKRA 609
           G G + +        +HR +  R+             + ++RE+R +RE ++     +  
Sbjct: 431 GMGMQSIHERMKLEEEHRAARLREEERAREAREAAIEREKERELREQREREQREKEQREK 490

Query: 608 QRKTKAATEAQSSQEGSRPRSAHRQAPAQNSSSVQVRE 495
           +++ K   E Q  ++  R R    +   + ++  + RE
Sbjct: 491 EQREKEERERQQREKEQREREQREKEREREAARERERE 528



 Score = 25.0 bits (52), Expect = 2.7
 Identities = 10/43 (23%), Positives = 25/43 (58%)
 Frame = -3

Query: 670 ETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKGLDPEAL 542
           E E+ + E+R+K ++ +    +ER++++ R +     + P +L
Sbjct: 504 EKEQREREQREKEREREAARERERERERERERERMMHMMPHSL 546



 Score = 23.4 bits (48), Expect = 8.4
 Identities = 11/46 (23%), Positives = 25/46 (54%)
 Frame = -3

Query: 712 RQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKERQKQQLRHK 575
           R+K Q   E   + + EK   E  Q+ ++ + +  +ER++++ R +
Sbjct: 488 REKEQREKEERERQQREKEQREREQREKEREREAARERERERERER 533


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 28.3 bits (60), Expect = 0.29
 Identities = 20/85 (23%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
 Frame = -3

Query: 649 EERQKRQDYDLKELKERQKQQLR--HKALKKGLDP--EALTGKHPPKIQVASKYERRVDT 482
           E+  +R    + E KE++ +Q+R  ++A+++  +     L  K   + ++ +K  R    
Sbjct: 327 EQELERLKITIAE-KEKELEQVRPRYEAMRRKEEECSRELNLKEQKRKELYAKQGRGSQF 385

Query: 481 RSYDDKKKLFEGDLEKLNKDFLEKV 407
            S +++ K  +G+L+ LNK   +K+
Sbjct: 386 SSKEERDKWIQGELKSLNKQIKDKI 410


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 26.6 bits (56), Expect = 0.90
 Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
 Frame = -3

Query: 739  IEGLSVDKLRQKAQELWECIVKLETEKYDLE-ERQKRQDYDLKELKERQKQQLR--HKAL 569
            I+ ++ DKL Q+  E+     +    +YD+  ER  +Q     E    +K  +R  +  +
Sbjct: 2525 IKHMAYDKLLQRVSEIEMTDGRKILYQYDVRAERTFKQVRAKDETVLSEKYYIRDANGFV 2584

Query: 568  KKGLDPEALTGKHPPKIQVAS 506
               +D   LT  HPP ++V S
Sbjct: 2585 LMDIDMAYLTNDHPPDVRVTS 2605


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 26.6 bits (56), Expect = 0.90
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = -3

Query: 472  DDKKKL--FEGDLEKLNKDFLEKVWQERAEQFGGRQKARLP 356
            DDKKK+     DL++  K  L+  W E  E FG      LP
Sbjct: 1008 DDKKKIQAIITDLDEEKKKKLKVAWSEVDENFGSIFSTLLP 1048


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 16/64 (25%), Positives = 30/64 (46%)
 Frame = -2

Query: 677 QTRDREIRSRREAKETGLRLKRAQRKTKAATEAQSSQEGSRPRSAHRQAPAQNSSSVQVR 498
           + R R    +RE KET +R ++ QR+ K    A+  Q         R+   Q+ ++++  
Sbjct: 240 EDRQRFDNYKRELKETMIRNQQLQRQRKQELIAEEQQSLEVIEGEMRRQQEQDRAALEAS 299

Query: 497 EACR 486
           +  R
Sbjct: 300 KEMR 303


>AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription factor
           protein.
          Length = 391

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -3

Query: 568 KKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLFE 449
           K+  D    T K    ++V  +YER   T   D   KLFE
Sbjct: 243 KEAEDTNDKTSKKTTLMEVTGQYERTFITFENDIDNKLFE 282


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 17/82 (20%), Positives = 34/82 (41%)
 Frame = -2

Query: 695 TLGVHRQTRDREIRSRREAKETGLRLKRAQRKTKAATEAQSSQEGSRPRSAHRQAPAQNS 516
           T+G+ ++  ++    R + + +  +LK AQR+ + A E    +E        ++    N+
Sbjct: 85  TVGIVKRLEEQIQLLRLQMEASNEQLKEAQREAREAREDARVREAEHREELRKEKELFNA 144

Query: 515 SSVQVREACRHTILRRQKETVR 450
              Q         L  Q+E  R
Sbjct: 145 LLAQTLGGTSGARLESQQELQR 166


>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 12/50 (24%), Positives = 21/50 (42%)
 Frame = -2

Query: 677 QTRDREIRSRREAKETGLRLKRAQRKTKAATEAQSSQEGSRPRSAHRQAP 528
           QTR   +      ++   R + AQR+T  ++  QS Q   + +      P
Sbjct: 121 QTRKGRVPKEARKRDNNARQRSAQRETPKSSGGQSKQPKKKKKKRSLPKP 170


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 14/49 (28%), Positives = 20/49 (40%)
 Frame = -3

Query: 475  YDDKKKLFEGDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGK 329
            Y     LF+    + NK+   K   +  EQFG + +    KW   R  K
Sbjct: 974  YKQYPHLFKDYFSQYNKN--HKYQNDYYEQFGNKNQEEFQKWSTTRIAK 1020


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 16/85 (18%), Positives = 39/85 (45%)
 Frame = -2

Query: 680 RQTRDREIRSRREAKETGLRLKRAQRKTKAATEAQSSQEGSRPRSAHRQAPAQNSSSVQV 501
           +Q + ++ + +++ ++   +  + Q+  +   +  ++    RP   HRQ   Q     Q 
Sbjct: 201 QQQQQQQRQQQQQCQQQRQQQPQQQQLQQPQQQLWTTVVRGRPSQRHRQPQQQQQQQQQQ 260

Query: 500 REACRHTILRRQKETVRG*PRETEQ 426
            E      LR+Q++  +  PR+ +Q
Sbjct: 261 GERYVPPQLRQQRQQQQR-PRQQQQ 284


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,450
Number of Sequences: 2352
Number of extensions: 8682
Number of successful extensions: 76
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 75
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85239615
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)