Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_A15
         (682 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2FXZ7 Cluster: Putative uncharacterized protein; n=1; ...    34   3.7  
UniRef50_A0CI86 Cluster: Chromosome undetermined scaffold_19, wh...    34   3.7  
UniRef50_A0C0Q0 Cluster: Chromosome undetermined scaffold_140, w...    33   4.9  
UniRef50_Q7S1G4 Cluster: Putative uncharacterized protein NCU095...    33   6.4  

>UniRef50_A2FXZ7 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 1164

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = +3

Query: 324 NKITIVKGMSYLLIDIYITALLNITYET-MQNVKSCFYFFYCT 449
           N + ++  + ++ +DIYI  +L   Y+T + ++ SCFY F+CT
Sbjct: 176 NILLVILTIVFVAVDIYIFIVL--PYQTKLVSILSCFYIFFCT 216


>UniRef50_A0CI86 Cluster: Chromosome undetermined scaffold_19, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_19,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 449

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 15/127 (11%)
 Frame = -3

Query: 455 LLGTVKKIKAAFHILHCFISNIKQGRDVNINQ*VRHSFNYRNFVYVFNCICGQLSRFLF* 276
           LL TVK  +     ++  IS +   RD+N  Q   +       + V++ I   +   +  
Sbjct: 75  LLQTVKDKQKTIIAINKLISELLYRRDLNTKQKTINLLGLNQKIEVYSQIKALIPNIVMG 134

Query: 275 YHVD---------LIRNDLLQIFF*NFKQMFSYFNRIFN------MGQQVIVLFQNTATF 141
           + +          +I N  L +   N  Q F  F +I+N      MGQ ++ L  NT  F
Sbjct: 135 FKITESNLTVSQFIIVNQFLIVTLENQSQ-FQKFGKIWNLIEPEIMGQMIVFLIGNTTPF 193

Query: 140 NKKFEKY 120
            K F+KY
Sbjct: 194 QKIFDKY 200


>UniRef50_A0C0Q0 Cluster: Chromosome undetermined scaffold_140,
           whole genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_140,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 441

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
 Frame = -3

Query: 521 KSQLKQVFRSSDFKTFASLSL*LLGTVKKIKAAFHILHCFISNIKQGRD-VNINQ*VRHS 345
           K+Q+KQ+ +    K    L    + T   +   F I H FIS    G D + +N      
Sbjct: 241 KAQIKQIKQKFQLKEMKFLFSLFISTGVVVGFEFGIFHKFISASLPGEDEITVNVKTARI 300

Query: 344 FNYRNFVYVFNCICGQLSRFLF 279
           F +     + + IC  +SR+ F
Sbjct: 301 FLFVGVAQILSGICNGVSRYFF 322


>UniRef50_Q7S1G4 Cluster: Putative uncharacterized protein NCU09507.1;
            n=2; Pezizomycotina|Rep: Putative uncharacterized protein
            NCU09507.1 - Neurospora crassa
          Length = 1411

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = -1

Query: 214  CFLISIEYLIWDSK*LSYFRTLQHLTKSLKNILGTGXRP*VTVIKLKEQPXAGAKGGG 41
            C+ +  EY  W S+   +     +L    + ILGT   P  T  + ++ P  G  GGG
Sbjct: 1246 CYKVGEEYDRWFSERFGFEVVFVYLGDGKRQILGTSLLPPATAQQQQQPPGGGGGGGG 1303


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,603,502
Number of Sequences: 1657284
Number of extensions: 10028061
Number of successful extensions: 18482
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18481
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)