Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_A13
(611 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23168-7|AAC38808.1| 115|Caenorhabditis elegans Hypothetical pr... 34 0.070
U23168-6|AAP86623.1| 114|Caenorhabditis elegans Hypothetical pr... 34 0.070
DQ241300-1|ABB45864.1| 114|Caenorhabditis elegans TRX-1b protein. 34 0.070
DQ241299-1|ABB45863.1| 115|Caenorhabditis elegans TRX-1a protein. 34 0.070
Z81552-7|CAB04487.2| 606|Caenorhabditis elegans Hypothetical pr... 33 0.21
AL117201-5|CAB57916.1| 606|Caenorhabditis elegans Hypothetical ... 33 0.21
AF250925-1|AAF74721.1| 542|Caenorhabditis elegans PNGase protein. 33 0.21
AF106589-2|AAC78230.1| 107|Caenorhabditis elegans Hypothetical ... 33 0.21
AF143900-1|AAF66677.1| 284|Caenorhabditis elegans thioredoxin-l... 29 2.0
AF143405-1|AAF66636.1| 284|Caenorhabditis elegans thioredoxin-l... 29 2.0
AC024810-17|AAF60759.1| 284|Caenorhabditis elegans Hypothetical... 29 2.0
>U23168-7|AAC38808.1| 115|Caenorhabditis elegans Hypothetical
protein B0228.5a protein.
Length = 115
Score = 34.3 bits (75), Expect = 0.070
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1
Query: 608 MPTFVFVKNGKKLDEFSGANVDKLXTTILKH 516
MPTF+F KNG ++ G D+L +L+H
Sbjct: 81 MPTFIFTKNGDAIEALEGCVEDELRQKVLEH 111
>U23168-6|AAP86623.1| 114|Caenorhabditis elegans Hypothetical
protein B0228.5b protein.
Length = 114
Score = 34.3 bits (75), Expect = 0.070
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1
Query: 608 MPTFVFVKNGKKLDEFSGANVDKLXTTILKH 516
MPTF+F KNG ++ G D+L +L+H
Sbjct: 80 MPTFIFTKNGDAIEALEGCVEDELRQKVLEH 110
>DQ241300-1|ABB45864.1| 114|Caenorhabditis elegans TRX-1b protein.
Length = 114
Score = 34.3 bits (75), Expect = 0.070
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1
Query: 608 MPTFVFVKNGKKLDEFSGANVDKLXTTILKH 516
MPTF+F KNG ++ G D+L +L+H
Sbjct: 80 MPTFIFTKNGDAIEALEGCVEDELRQKVLEH 110
>DQ241299-1|ABB45863.1| 115|Caenorhabditis elegans TRX-1a protein.
Length = 115
Score = 34.3 bits (75), Expect = 0.070
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1
Query: 608 MPTFVFVKNGKKLDEFSGANVDKLXTTILKH 516
MPTF+F KNG ++ G D+L +L+H
Sbjct: 81 MPTFIFTKNGDAIEALEGCVEDELRQKVLEH 111
>Z81552-7|CAB04487.2| 606|Caenorhabditis elegans Hypothetical
protein F56G4.5 protein.
Length = 606
Score = 32.7 bits (71), Expect = 0.21
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -1
Query: 611 SMPTFVFVKNGKKLDEFSGANVDKLXTTILKH 516
+MPTF+F+KN +++D GAN + I +H
Sbjct: 75 AMPTFIFLKNRQQVDMVRGANQQAIAEKIRQH 106
>AL117201-5|CAB57916.1| 606|Caenorhabditis elegans Hypothetical
protein F56G4.5 protein.
Length = 606
Score = 32.7 bits (71), Expect = 0.21
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -1
Query: 611 SMPTFVFVKNGKKLDEFSGANVDKLXTTILKH 516
+MPTF+F+KN +++D GAN + I +H
Sbjct: 75 AMPTFIFLKNRQQVDMVRGANQQAIAEKIRQH 106
>AF250925-1|AAF74721.1| 542|Caenorhabditis elegans PNGase protein.
Length = 542
Score = 32.7 bits (71), Expect = 0.21
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -1
Query: 611 SMPTFVFVKNGKKLDEFSGANVDKLXTTILKH 516
+MPTF+F+KN +++D GAN + I +H
Sbjct: 11 AMPTFIFLKNRQQVDMVRGANQQAIAEKIRQH 42
>AF106589-2|AAC78230.1| 107|Caenorhabditis elegans Hypothetical
protein Y44E3A.3 protein.
Length = 107
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -1
Query: 611 SMPTFVFVKNGKKLDEFSGANVDK 540
SMPTF+ + +G K D+FSGAN K
Sbjct: 74 SMPTFLLIVDGIKKDQFSGANNTK 97
>AF143900-1|AAF66677.1| 284|Caenorhabditis elegans thioredoxin-like
protein protein.
Length = 284
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = -1
Query: 611 SMPTFVFVKNGKKLDEFSGANVDKLXTTILKH 516
SMPTF+ ++G ++++ GA+ L T + K+
Sbjct: 74 SMPTFMVFQSGVRVEQMKGADAKALETMVKKY 105
>AF143405-1|AAF66636.1| 284|Caenorhabditis elegans thioredoxin-like
protein TXL protein.
Length = 284
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = -1
Query: 611 SMPTFVFVKNGKKLDEFSGANVDKLXTTILKH 516
SMPTF+ ++G ++++ GA+ L T + K+
Sbjct: 74 SMPTFMVFQSGVRVEQMKGADAKALETMVKKY 105
>AC024810-17|AAF60759.1| 284|Caenorhabditis elegans Hypothetical
protein Y54E10A.3 protein.
Length = 284
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = -1
Query: 611 SMPTFVFVKNGKKLDEFSGANVDKLXTTILKH 516
SMPTF+ ++G ++++ GA+ L T + K+
Sbjct: 74 SMPTFMVFQSGVRVEQMKGADAKALETMVKKY 105
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,504,185
Number of Sequences: 27780
Number of extensions: 245341
Number of successful extensions: 491
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 491
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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