Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_A11
(530 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46583| Best HMM Match : Hus1 (HMM E-Value=0) 62 2e-10
SB_50692| Best HMM Match : efhand (HMM E-Value=1.5e-15) 60 1e-09
SB_23574| Best HMM Match : efhand (HMM E-Value=2e-05) 57 8e-09
SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 5e-08
SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26) 53 1e-07
SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39) 52 2e-07
SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39) 52 2e-07
SB_45639| Best HMM Match : efhand (HMM E-Value=9.1e-08) 50 9e-07
SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29) 50 1e-06
SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41) 46 2e-05
SB_16922| Best HMM Match : DUF1647 (HMM E-Value=2e-07) 44 8e-05
SB_10943| Best HMM Match : efhand (HMM E-Value=6.4e-07) 44 8e-05
SB_45638| Best HMM Match : efhand (HMM E-Value=0.00028) 43 2e-04
SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_10944| Best HMM Match : efhand (HMM E-Value=7.4e-24) 40 0.001
SB_3425| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_3800| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_16925| Best HMM Match : efhand (HMM E-Value=3e-22) 31 0.58
SB_57512| Best HMM Match : DUF573 (HMM E-Value=4.7) 28 4.1
SB_13363| Best HMM Match : COG2 (HMM E-Value=0.081) 28 4.1
SB_50098| Best HMM Match : DUF573 (HMM E-Value=4.7) 28 4.1
SB_43494| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_43877| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
>SB_46583| Best HMM Match : Hus1 (HMM E-Value=0)
Length = 646
Score = 62.5 bits (145), Expect = 2e-10
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = -1
Query: 527 LTLEEFLPXYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 348
++ EEFLP Y+ A + K G+ ++F+E L+++D++ G +L AEL L++LGEKL D E
Sbjct: 567 VSFEEFLPIYTSAYQKKQTGSADEFVEGLRVFDRDGTGTVLAAELRSVLMSLGEKLSDEE 626
Query: 347 VAEVTKDCMDPEDDDGMIPY 288
V + +D G I Y
Sbjct: 627 VTTLFAPV---DDSSGHINY 643
>SB_50692| Best HMM Match : efhand (HMM E-Value=1.5e-15)
Length = 150
Score = 60.1 bits (139), Expect = 1e-09
Identities = 32/88 (36%), Positives = 49/88 (55%)
Frame = -1
Query: 527 LTLEEFLPXYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 348
++ EEFLP Y K + + EDF++ L+++D + +G++ EL H L LGEKL DSE
Sbjct: 64 ISFEEFLPVYQSYMGKKPKFSTEDFVDSLRVFDNDGSGMINEGELRHILTTLGEKLTDSE 123
Query: 347 VAEVTKDCMDPEDDDGMIPYAAFLKKVM 264
V + + ED G I F+ V+
Sbjct: 124 VDSLIQGL---EDKQGQIDCEEFILSVL 148
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = -1
Query: 449 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 276
E +LYDK + + ++L L LG+ ++EV ++ + MDPE + I + FL
Sbjct: 15 ESFELYDKQGDEKIDSSQLGEVLRGLGQNPTNAEVKKIVSE-MDPEGGN-RISFEEFL 70
>SB_23574| Best HMM Match : efhand (HMM E-Value=2e-05)
Length = 69
Score = 57.2 bits (132), Expect = 8e-09
Identities = 28/64 (43%), Positives = 41/64 (64%)
Frame = -1
Query: 455 FLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 276
F+EC K++D+N NGL+ AEL H L +LG+KL D EV + + ED+ G + Y F+
Sbjct: 7 FMECFKVFDRNGNGLIGAAELRHLLASLGDKLSDEEVDNL---MVGFEDNQGQVFYEDFV 63
Query: 275 KKVM 264
+ VM
Sbjct: 64 RAVM 67
>SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 54.4 bits (125), Expect = 5e-08
Identities = 27/68 (39%), Positives = 40/68 (58%)
Frame = -1
Query: 491 AKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPE 312
A+K KD + E+ E +++DK+ NG + AEL H + LGEKL D EV E+ ++
Sbjct: 74 ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 131
Query: 311 DDDGMIPY 288
D DG + Y
Sbjct: 132 DGDGQVNY 139
Score = 30.7 bits (66), Expect = 0.77
Identities = 16/61 (26%), Positives = 32/61 (52%)
Frame = -1
Query: 458 DFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAF 279
+F E L+DK+ +G + EL + +LG+ ++E+ ++ + D +G I + F
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNGTIDFPEF 69
Query: 278 L 276
L
Sbjct: 70 L 70
>SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26)
Length = 213
Score = 53.2 bits (122), Expect = 1e-07
Identities = 30/81 (37%), Positives = 44/81 (54%)
Frame = -1
Query: 530 LLTLEEFLPXYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDS 351
++ EFL AKK +Q + E+ E +++DK+ NG + AEL H + LGEKL D
Sbjct: 27 IIDFPEFLTM--MAKKMGEQDSDEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 84
Query: 350 EVAEVTKDCMDPEDDDGMIPY 288
EV E+ + D DG + Y
Sbjct: 85 EVEEMIMEA--DIDGDGQVNY 103
>SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 659
Score = 52.4 bits (120), Expect = 2e-07
Identities = 26/68 (38%), Positives = 40/68 (58%)
Frame = -1
Query: 491 AKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPE 312
A+K K+ + E+ E +++DK+ NG + AEL H + LGEKL D EV E+ ++
Sbjct: 63 ARKMKNTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 120
Query: 311 DDDGMIPY 288
D DG + Y
Sbjct: 121 DGDGQVNY 128
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = -1
Query: 455 FLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 276
F E L+DK+ +G + EL + +LG+ ++E+ ++ + D +G I + FL
Sbjct: 2 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNGTIDFPEFL 59
>SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 250
Score = 52.4 bits (120), Expect = 2e-07
Identities = 26/68 (38%), Positives = 40/68 (58%)
Frame = -1
Query: 491 AKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPE 312
A+K K+ + E+ E +++DK+ NG + AEL H + LGEKL D EV E+ ++
Sbjct: 63 ARKMKNTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 120
Query: 311 DDDGMIPY 288
D DG + Y
Sbjct: 121 DGDGQVNY 128
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = -1
Query: 455 FLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 276
F E L+DK+ +G + EL + +LG+ ++E+ ++ + D +G I + FL
Sbjct: 2 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNGTIDFPEFL 59
>SB_45639| Best HMM Match : efhand (HMM E-Value=9.1e-08)
Length = 144
Score = 50.4 bits (115), Expect = 9e-07
Identities = 29/89 (32%), Positives = 47/89 (52%)
Frame = -1
Query: 527 LTLEEFLPXYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 348
++ + FL Y K K QG E+F+E L+ +D N +G M A+L + L +LG+ L +
Sbjct: 60 VSFDSFLSLYVSYSK-KPQGGMEEFIEGLRAFDNNSDGTMSSAQLRNLLTSLGDTLTPDQ 118
Query: 347 VAEVTKDCMDPEDDDGMIPYAAFLKKVMA 261
+ + +D+ G I Y + KVMA
Sbjct: 119 ADAI----VALQDNHGTIEYEKLVDKVMA 143
>SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29)
Length = 420
Score = 50.0 bits (114), Expect = 1e-06
Identities = 26/68 (38%), Positives = 40/68 (58%)
Frame = -1
Query: 491 AKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPE 312
AKK K+ E+ + K++DKN +G++ +EL + LGE+L D EV E+ ++
Sbjct: 353 AKKIKETDTEEEIQDAFKVFDKNGDGMISSSELKLVMSNLGERLTDDEVDEMIREA--DI 410
Query: 311 DDDGMIPY 288
D DGMI Y
Sbjct: 411 DGDGMIDY 418
Score = 37.9 bits (84), Expect = 0.005
Identities = 19/77 (24%), Positives = 39/77 (50%)
Frame = -1
Query: 497 SQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMD 318
S ++ + + E L+DK+ G + +EL H + +LG+ + E+ ++ +
Sbjct: 278 SSVREKLSEEQVAELKEAFALFDKDGGGSISSSELAHVMRSLGQNPTEQELKDMIAEV-- 335
Query: 317 PEDDDGMIPYAAFLKKV 267
+DD+G I + FL+ V
Sbjct: 336 DQDDNGEIDFPEFLQMV 352
>SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41)
Length = 153
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/84 (30%), Positives = 46/84 (54%)
Frame = -1
Query: 518 EEFLPXYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAE 339
EEFL + + +D A + E +++D+N +G + EL + +LGEKL D E+ E
Sbjct: 56 EEFLAMMKKQMQHRDAEA--EMREAFRVFDRNGDGSISEWELRSVMASLGEKLSDDEIKE 113
Query: 338 VTKDCMDPEDDDGMIPYAAFLKKV 267
+ ++ D DG+I + F++ V
Sbjct: 114 MMREA--DLDGDGVINFQEFVQMV 135
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = -1
Query: 437 LYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 276
L+DK+ +G + EL + +LG+ D E+ ++ ++ D +G + + FL
Sbjct: 8 LFDKDGSGTISNEELEVVMKSLGQNPSDEELQQMIQEV--DADGNGEVDFEEFL 59
>SB_16922| Best HMM Match : DUF1647 (HMM E-Value=2e-07)
Length = 422
Score = 44.0 bits (99), Expect = 8e-05
Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Frame = -1
Query: 527 LTLEEFLPXYSQAKKD----KDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKL 360
+ +EFLP Y + + + + E ++C K +D++++G + + L H L +LGE+L
Sbjct: 330 MAFDEFLPIYHSVTQHCLTTEKKVSSESVIDCFKHFDRSDSGYISSSMLRHVLTSLGERL 389
Query: 359 DDSEVAEVTKDCMDPEDDDGMIPYAAFLKKVM 264
D E ++ ++ G I Y +K+V+
Sbjct: 390 SDEEFDALSSGYVNAR---GEIDYENMVKEVL 418
>SB_10943| Best HMM Match : efhand (HMM E-Value=6.4e-07)
Length = 154
Score = 44.0 bits (99), Expect = 8e-05
Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Frame = -1
Query: 527 LTLEEFLPXYSQAKKD----KDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKL 360
+ +EFLP Y + + + + E ++C K +D++++G + + L H L +LGE+L
Sbjct: 62 MAFDEFLPIYHSVTQHCLTTEKKVSSESVIDCFKHFDRSDSGYISSSMLRHVLTSLGERL 121
Query: 359 DDSEVAEVTKDCMDPEDDDGMIPYAAFLKKVM 264
D E ++ ++ G I Y +K+V+
Sbjct: 122 SDEEFDALSSGYVNAR---GEIDYENMVKEVL 150
>SB_45638| Best HMM Match : efhand (HMM E-Value=0.00028)
Length = 146
Score = 42.7 bits (96), Expect = 2e-04
Identities = 28/89 (31%), Positives = 43/89 (48%)
Frame = -1
Query: 527 LTLEEFLPXYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 348
++ EE+LP Y++ K K A EDFLE LK++D+ NG + L G+K+ + E
Sbjct: 60 VSFEEWLPIYTEFSKKKPP-AKEDFLEGLKVFDREANGKIDSGTFRGLLCNRGDKITEEE 118
Query: 347 VAEVTKDCMDPEDDDGMIPYAAFLKKVMA 261
+ D G + Y + VMA
Sbjct: 119 ADAILAGHEDTV--KGEVDYNELIDFVMA 145
>SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 42.3 bits (95), Expect = 2e-04
Identities = 26/89 (29%), Positives = 38/89 (42%)
Frame = -1
Query: 527 LTLEEFLPXYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 348
+ L EF+ A K K+ D E L+DK+ NGL+ E+ +G + + E
Sbjct: 68 IDLPEFIEL--MASKSKNDTTESDLREAFSLFDKDGNGLISAQEMKFVFTCMGFNITEKE 125
Query: 347 VAEVTKDCMDPEDDDGMIPYAAFLKKVMA 261
E+ K D DG I Y F M+
Sbjct: 126 AVELVKQA--DMDGDGHINYEEFKNAFMS 152
Score = 41.1 bits (92), Expect = 5e-04
Identities = 25/80 (31%), Positives = 36/80 (45%)
Frame = -1
Query: 527 LTLEEFLPXYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 348
+ L EF+ A K K+ D E L+DK+ NGL+ E+ L +G + + E
Sbjct: 197 IDLPEFIEL--MASKSKNDTTESDLREAFSLFDKDGNGLISAQEMKFVLTCMGFNITEKE 254
Query: 347 VAEVTKDCMDPEDDDGMIPY 288
E+ K D DG I Y
Sbjct: 255 AVELVKQA--DIDGDGHINY 272
Score = 29.9 bits (64), Expect = 1.4
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = -1
Query: 527 LTLEEFLPXYSQAKKDKDQGA-YEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDS 351
+T +E + QA D D YE+F +DKN +G + EL ++G D
Sbjct: 121 ITEKEAVELVKQADMDGDGHINYEEFKNAFMSFDKNVDGRIDAEELEIVTRSIGLHPKDE 180
Query: 350 EVAEVTKDCMDPEDDDGMIPYAAFLKKVMA*KT 252
E+ + K +D G I F+ ++MA K+
Sbjct: 181 ELKAMIKQA--DKDGSGDIDLPEFI-ELMASKS 210
>SB_10944| Best HMM Match : efhand (HMM E-Value=7.4e-24)
Length = 127
Score = 39.9 bits (89), Expect = 0.001
Identities = 25/74 (33%), Positives = 37/74 (50%)
Frame = -1
Query: 494 QAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDP 315
+ K +KD + E+ L+ KL+D +E G + L LGE L D E+ E+ +
Sbjct: 50 ELKSEKD--SKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEA--D 105
Query: 314 EDDDGMIPYAAFLK 273
D DG I A FL+
Sbjct: 106 RDGDGEINEAEFLR 119
>SB_3425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 32.7 bits (71), Expect = 0.19
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = -1
Query: 461 EDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAA 282
E+ + +++D+N +G + EL + LG+ L E E+ M +D DG + Y
Sbjct: 217 ENLRQAFRVFDRNGDGYISAEELRVAVTTLGDALTQDEAEELIG--MLDQDGDGKLGYEE 274
Query: 281 FL 276
F+
Sbjct: 275 FV 276
>SB_3800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 31.1 bits (67), Expect = 0.58
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = -1
Query: 467 AYEDFL-ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIP 291
A ED L + ++ D+++ G + ELT + GE EV E+ +DPE G+I
Sbjct: 59 APEDQLSKAFEVLDQDKKGYLTTEELTKYMTEEGEAFTQEEVEEMLSAAVDPE--KGVIF 116
Query: 290 YAAFL 276
Y F+
Sbjct: 117 YKDFV 121
>SB_16925| Best HMM Match : efhand (HMM E-Value=3e-22)
Length = 132
Score = 31.1 bits (67), Expect = 0.58
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = -1
Query: 449 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLK 273
+ ++DK+ +G + EL + LGE D E+ ++ D +D G I +A F++
Sbjct: 7 DVFSMFDKDNSGSIDTDELRDVMRELGENPSDKEIQDMIADA--DKDGSGEIRFAQFMQ 63
>SB_57512| Best HMM Match : DUF573 (HMM E-Value=4.7)
Length = 252
Score = 28.3 bits (60), Expect = 4.1
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = -2
Query: 508 FPXTAKQRKTKTRERMKISWNV*SCMTRTKTVSCLALSSHTRFLH*VRSLTTVKSLKSQR 329
FP K RK R MKIS+ SCM+ TK + + SH + + S+TT + S
Sbjct: 54 FPKDHKLRKIFNRNTMKISY---SCMSNTKQI----IDSHDKRII-ASSITTEDAPTSLA 105
Query: 328 TA 323
TA
Sbjct: 106 TA 107
>SB_13363| Best HMM Match : COG2 (HMM E-Value=0.081)
Length = 411
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = -1
Query: 521 LEEFLPXYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVA 342
L+E+L A + Y DF+ + LM+ EL +T++++ EKLD
Sbjct: 51 LDEYLKALKHALIELINQDYADFVNL-------SSNLMIRTELDNTIVSIEEKLDQRSQL 103
Query: 341 EVTKDCM 321
K CM
Sbjct: 104 RQKKVCM 110
>SB_50098| Best HMM Match : DUF573 (HMM E-Value=4.7)
Length = 151
Score = 28.3 bits (60), Expect = 4.1
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = -2
Query: 508 FPXTAKQRKTKTRERMKISWNV*SCMTRTKTVSCLALSSHTRFLH*VRSLTTVKSLKSQR 329
FP K RK R MKIS+ SCM+ TK + + SH + + S+TT + S
Sbjct: 4 FPKDHKLRKIFNRNTMKISY---SCMSNTKQI----IDSHDKRII-ASSITTEDAPTSLA 55
Query: 328 TA 323
TA
Sbjct: 56 TA 57
>SB_43494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -2
Query: 526 SHSKSSFPXTAKQRKTKTRERMKISWNV*SCMTRT 422
SHS +F R KT+ +++I NV C+T+T
Sbjct: 8 SHSTGAFTSFKSNRVHKTQCKIQIDTNVLRCLTQT 42
>SB_43877| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 335 TKDCMDPEDDDGMIPYAAFLKKVMA*KTSQLVISLVIRS 219
+KD +D D PY LK + A SQLV S ++ S
Sbjct: 21 SKDALDAITGDHFNPYCKDLKDISAAPKSQLVASAILLS 59
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,921,753
Number of Sequences: 59808
Number of extensions: 274786
Number of successful extensions: 918
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1191330434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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