Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_A09
         (779 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.68 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   4.8  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   4.8  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   6.3  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   8.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.68
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +3

Query: 477 LLCLSFSNTFFLMHCVSLLGLICVPILSMPYIYL 578
           LLC+ +    F++  V LL L+C+    +P  +L
Sbjct: 110 LLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFL 143



 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 477 LLCLSFSNTFFLMHCVSLLGLICV 548
           LLC+ +    F++  V LL L+C+
Sbjct: 143 LLCIYYFYCAFIIFTVHLLFLLCI 166



 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 477 LLCLSFSNTFFLMHCVSLLGLICV 548
           LLC+ +    F++  V LL L+C+
Sbjct: 235 LLCIYYFYYAFILFTVHLLLLVCI 258


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 7/29 (24%), Positives = 16/29 (55%)
 Frame = +2

Query: 131 FNLNINSKHGSKIMAIYCGMSFCQYSLFF 217
           F++ +  K  S+ + I+C + FC +   +
Sbjct: 238 FSVPLLMKIASQFVGIFCSLYFCIFGYIY 266


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 7/29 (24%), Positives = 16/29 (55%)
 Frame = +2

Query: 131 FNLNINSKHGSKIMAIYCGMSFCQYSLFF 217
           F++ +  K  S+ + I+C + FC +   +
Sbjct: 63  FSVPLLMKIASQFVGIFCSLYFCIFGYIY 91


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 212 KVNIDKMTCHNILP*FCFHV 153
           +V I K T  +I+P  C H+
Sbjct: 100 RVKIGKFTPEHIIPDLCTHI 119


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -2

Query: 508 KNVFEKLKHKRLSIS 464
           + VFEKLK  R++I+
Sbjct: 476 RQVFEKLKQARMTIN 490


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,726
Number of Sequences: 336
Number of extensions: 3514
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21065107
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)