Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_A08
(735 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 331 3e-91
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 331 3e-91
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 331 3e-91
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 331 3e-91
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 331 3e-91
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 331 3e-91
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 330 6e-91
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 330 6e-91
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 330 6e-91
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 324 4e-89
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 309 2e-84
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 158 4e-39
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 152 3e-37
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 120 1e-27
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 105 4e-23
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 93 1e-19
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 76 3e-14
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 76 3e-14
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 7e-06
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical... 29 4.5
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 331 bits (813), Expect = 3e-91
Identities = 154/165 (93%), Positives = 161/165 (97%)
Frame = -3
Query: 733 DIKEKLXYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 554
DIKEKL YVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME
Sbjct: 212 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGME 271
Query: 553 SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII 374
S GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKII
Sbjct: 272 SAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 331
Query: 373 APPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 239
APPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 332 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 331 bits (813), Expect = 3e-91
Identities = 154/165 (93%), Positives = 161/165 (97%)
Frame = -3
Query: 733 DIKEKLXYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 554
DIKEKL YVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME
Sbjct: 212 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGME 271
Query: 553 SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII 374
S GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKII
Sbjct: 272 SAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 331
Query: 373 APPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 239
APPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 332 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 331 bits (813), Expect = 3e-91
Identities = 154/165 (93%), Positives = 161/165 (97%)
Frame = -3
Query: 733 DIKEKLXYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 554
DIKEKL YVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME
Sbjct: 212 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGME 271
Query: 553 SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII 374
S GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKII
Sbjct: 272 SAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 331
Query: 373 APPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 239
APPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 332 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 331 bits (813), Expect = 3e-91
Identities = 154/165 (93%), Positives = 161/165 (97%)
Frame = -3
Query: 733 DIKEKLXYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 554
DIKEKL YVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME
Sbjct: 168 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGME 227
Query: 553 SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII 374
S GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKII
Sbjct: 228 SAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 287
Query: 373 APPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 239
APPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 288 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 331 bits (813), Expect = 3e-91
Identities = 154/165 (93%), Positives = 161/165 (97%)
Frame = -3
Query: 733 DIKEKLXYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 554
DIKEKL YVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME
Sbjct: 198 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGME 257
Query: 553 SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII 374
S GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKII
Sbjct: 258 SAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 317
Query: 373 APPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 239
APPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 318 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 331 bits (813), Expect = 3e-91
Identities = 154/165 (93%), Positives = 161/165 (97%)
Frame = -3
Query: 733 DIKEKLXYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 554
DIKEKL YVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME
Sbjct: 212 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGME 271
Query: 553 SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII 374
S GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKII
Sbjct: 272 SAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 331
Query: 373 APPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 239
APPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 332 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 330 bits (811), Expect = 6e-91
Identities = 153/165 (92%), Positives = 161/165 (97%)
Frame = -3
Query: 733 DIKEKLXYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 554
DIKEKL YVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME
Sbjct: 212 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGME 271
Query: 553 SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII 374
S GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKII
Sbjct: 272 SAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 331
Query: 373 APPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 239
APPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 332 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 330 bits (811), Expect = 6e-91
Identities = 153/165 (92%), Positives = 161/165 (97%)
Frame = -3
Query: 733 DIKEKLXYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 554
DIKEKL YVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME
Sbjct: 212 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGME 271
Query: 553 SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII 374
S GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKII
Sbjct: 272 SAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 331
Query: 373 APPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 239
APPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 332 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 330 bits (811), Expect = 6e-91
Identities = 153/165 (92%), Positives = 161/165 (97%)
Frame = -3
Query: 733 DIKEKLXYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 554
DIKEKL YVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME
Sbjct: 212 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGME 271
Query: 553 SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII 374
S GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKII
Sbjct: 272 SAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 331
Query: 373 APPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 239
APPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 332 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 324 bits (796), Expect = 4e-89
Identities = 152/165 (92%), Positives = 160/165 (96%)
Frame = -3
Query: 733 DIKEKLXYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 554
DIKEKL YVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME
Sbjct: 212 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGME 271
Query: 553 SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII 374
S GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAP T+KIKII
Sbjct: 272 SAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP-TMKIKII 330
Query: 373 APPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 239
APPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 331 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 309 bits (758), Expect = 2e-84
Identities = 143/165 (86%), Positives = 153/165 (92%)
Frame = -3
Query: 733 DIKEKLXYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 554
DIKEKL YVA DFE E+A AA+S+SLEKSYELPDGQVITIGNERFRCPE LFQP+F+GME
Sbjct: 211 DIKEKLCYVAHDFESELAAAASSSSLEKSYELPDGQVITIGNERFRCPEVLFQPAFIGME 270
Query: 553 SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII 374
GIHET Y SIMKCDVDIRKDLYANTV+SGGT+M+PGIADRMQKEI LAPST+KIKII
Sbjct: 271 GAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQKEIQHLAPSTMKIKII 330
Query: 373 APPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 239
APPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 331 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 158 bits (383), Expect = 4e-39
Identities = 76/165 (46%), Positives = 106/165 (64%)
Frame = -3
Query: 733 DIKEKLXYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 554
++KE Y+ALD T + S++ SY LPD I I N FR PE LF+P +G E
Sbjct: 215 EMKENACYLALD-----PTKVENNSVKSSYALPDTTKIEISNSLFRAPEVLFKPDLIGTE 269
Query: 553 SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII 374
G+ V SIMKCDVD+R+ LY+N V+SGGTT++ G DR+ E+ +AP+ KI+I
Sbjct: 270 WPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRIS 329
Query: 373 APPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 239
A ER WIGGSI+ASL TF++MW+ K+EY++ G +H++ F
Sbjct: 330 ASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 152 bits (368), Expect = 3e-37
Identities = 76/168 (45%), Positives = 104/168 (61%), Gaps = 13/168 (7%)
Frame = -3
Query: 730 IKEKLXYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMES 551
+KEKL Y+A D EQE A +T L + Y LPDG+VI +G ERF PE LFQP + +E
Sbjct: 216 MKEKLCYIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHLINVEK 275
Query: 550 CGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL----------- 404
G+ E ++ I D+D R D Y + V+SGGTTMYPG+ R++KE+ L
Sbjct: 276 AGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTD 335
Query: 403 APSTIKIKIIAPPERKYSVWIGGSILASL--STFQQMWISKEEYDESG 266
A KI+I APP RK+ V++GG++LA+L Q W+SK+EY+E G
Sbjct: 336 AFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 120 bits (289), Expect = 1e-27
Identities = 60/143 (41%), Positives = 80/143 (55%), Gaps = 8/143 (5%)
Frame = -3
Query: 646 YELPDGQVITIGNERFRCPEALFQPSFLGMES-----CGIHETVYNSIMKCDVDIRKDLY 482
Y P+G G ER + PE LF +L E + + S D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 481 ANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP---ERKYSVWIGGSILASLST 311
+N ++GG ++ G +R+ + P TIK+++ A P ERKY WIGGSIL SL T
Sbjct: 353 SNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGT 412
Query: 310 FQQMWISKEEYDESGPGIVHRKC 242
FQQMW+SK EYDESG IV +KC
Sbjct: 413 FQQMWVSKAEYDESGKSIVEKKC 435
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 105 bits (251), Expect = 4e-23
Identities = 50/151 (33%), Positives = 91/151 (60%), Gaps = 3/151 (1%)
Frame = -3
Query: 724 EKLXYVALDFEQEMATAAAST--SLEKSYELPDGQV-ITIGNERFRCPEALFQPSFLGME 554
E+ YV D+++E + T SL+ P Q I N RF C E LF+P G++
Sbjct: 389 EQTTYVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSRFLCTEGLFKPKKWGLD 448
Query: 553 SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII 374
+ G+H+ ++ +I++C +D R+ LY N ++GG ++ PGIA+++++E++ + P+TI ++
Sbjct: 449 TKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQELSTVVPNTIHTQVN 508
Query: 373 APPERKYSVWIGGSILASLSTFQQMWISKEE 281
P R + ++G I+AS STF+ IS ++
Sbjct: 509 ISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 93.5 bits (222), Expect = 1e-19
Identities = 64/183 (34%), Positives = 92/183 (50%), Gaps = 25/183 (13%)
Frame = -3
Query: 730 IKEKLXYVALDFEQEMATAAASTSLEKSYELPDG-QVIT-------IGNERFRCPEALFQ 575
IKEK YV D +E T K DG IT +G ERF PE F
Sbjct: 234 IKEKFCYVCPDVMKEFVKY--DTDAAKWLRTYDGINSITKKPFNVDVGYERFLGPEIFFH 291
Query: 574 PSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALA- 401
P F E + I +T+ I +C +D+R+ LY N V+SGG+TM+ A ++Q+++ L+
Sbjct: 292 PEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQRDVKRLSD 351
Query: 400 ---------------PSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESG 266
P I +++I+ ++Y+VW GGS+LAS S F Q+ +K EY E G
Sbjct: 352 GRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYMERG 411
Query: 265 PGI 257
P I
Sbjct: 412 PSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 75.8 bits (178), Expect = 3e-14
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 3/155 (1%)
Frame = -3
Query: 712 YVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHET 533
Y+ DF ++P I +G ERF PE LF PS + ++ CG+ E
Sbjct: 236 YIMPDFHSTFRGVVKDVKEPHDPQIPS---IHLGVERFAIPEILFNPSDIDIDQCGVAEA 292
Query: 532 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI---IAPPE 362
V SI +C +R L N ++ GG++ +PG +R+++E+ ++ P+ + + + P+
Sbjct: 293 VIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQ 352
Query: 361 RKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 257
W G L L+ + WI+++++DE G +
Sbjct: 353 T--HSWHCGQEL--LTASKVPWINRKDWDERGDSL 383
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 75.8 bits (178), Expect = 3e-14
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 3/155 (1%)
Frame = -3
Query: 712 YVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHET 533
Y+ DF ++P I +G ERF PE LF PS + ++ CG+ E
Sbjct: 236 YIMPDFHSTFRGVVKDVKEPHDPQIPS---IHLGVERFAIPEILFNPSDIDIDQCGVAEA 292
Query: 532 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI---IAPPE 362
V SI +C +R L N ++ GG++ +PG +R+++E+ ++ P+ + + + P+
Sbjct: 293 VIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQ 352
Query: 361 RKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 257
W G L L+ + WI+++++DE G +
Sbjct: 353 T--HSWHCGQEL--LTASKVPWINRKDWDERGDSL 383
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 48.0 bits (109), Expect = 7e-06
Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Frame = -3
Query: 532 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL-APSTIKIKIIAP---- 368
++ + KC +D+RK L+ N +++GG + PG+ R+++EI + + KI +I
Sbjct: 194 LHKLVSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQF 253
Query: 367 PERK----YSVWIGGSILASL-STFQQMWISKEEY 278
E K + W+G S+L SL T ++ ++ EE+
Sbjct: 254 SEIKNTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = -2
Query: 545 HPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPR 402
HP + HH+ H PV HR R H Q A RPR
Sbjct: 769 HPHHQQMPHHQPHLHHAHHPVHPHRGPRASHSQHLQHGQYAHHTQRPR 816
>AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical
protein T24C4.7 protein.
Length = 798
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -2
Query: 446 PRYRRQDAEGDHRPRALDHQDQDHRSPREEVLR 348
P+YRRQ L Q Q HR PRE +L+
Sbjct: 181 PKYRRQVMHCSKSEHKLVLQTQKHRLPRERMLK 213
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,436,362
Number of Sequences: 27780
Number of extensions: 292436
Number of successful extensions: 880
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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