Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_A07
         (763 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   2.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.7  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   6.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   6.1  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   8.1  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   8.1  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -3

Query: 410 VRWSPDGELYASGSEDGTVRLWQAVP 333
           V   P GE++  G ++  +  W A P
Sbjct: 365 VNMLPKGEIFHMGGDEVYIPCWNATP 390


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -1

Query: 79  HFKLCLCCLFYCNTCFLXSNLCIY 8
           +  L  CC F   T  L   LCIY
Sbjct: 263 YMHLLFCCAFIIFTMHLLFLLCIY 286



 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 81  NILNCVCVVYFIATLVFXTQTYVF 10
           ++L  +C+ YF+  L F    Y F
Sbjct: 126 HLLFLLCIYYFVVPLFFLLCIYYF 149


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = +2

Query: 629 IWLHPWTTL 655
           +W+HPW  L
Sbjct: 543 VWIHPWIPL 551


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -1

Query: 589  RTRCASYASSPCQRSATRHRWLRAGRP 509
            R    ++A SPC+ SA+     R+G P
Sbjct: 920  RQPAETHAGSPCRNSASPASSDRSGTP 946


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = +3

Query: 597 KRYVCTVCNSQY 632
           KR+ C +CN ++
Sbjct: 373 KRFACPICNKRF 384


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -3

Query: 134 TCEDISNVHK 105
           TCEDI N H+
Sbjct: 160 TCEDIGNSHR 169


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,341
Number of Sequences: 336
Number of extensions: 3874
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)