Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_A07
         (763 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    24   1.8  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    23   4.1  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   7.1  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   9.4  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 512 SPGSEPAMPSSTSLARGTRVACAS 583
           +PG  P  PS++ + RG   A  S
Sbjct: 583 APGQSPDWPSTSQIQRGVNAAIRS 606


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 531 AGSEPGDLRVRRRRSKSL 478
           A    GDL +R+R SKSL
Sbjct: 369 ASKSHGDLELRQRSSKSL 386


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 597 KRYVCTVCNSQYGS 638
           K Y CT+C+  +GS
Sbjct: 258 KVYKCTLCHETFGS 271


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 515 PGSEPAMPSSTSLA 556
           PGS P MP+  S+A
Sbjct: 436 PGSMPTMPTMPSMA 449


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,119
Number of Sequences: 438
Number of extensions: 4240
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)