Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_A07
(763 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 135 3e-32
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 135 3e-32
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 132 2e-31
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 132 2e-31
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 61 9e-10
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 58 5e-09
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 58 5e-09
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 55 6e-08
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 54 1e-07
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 54 1e-07
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 54 1e-07
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 53 2e-07
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 53 2e-07
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 53 2e-07
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 53 2e-07
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 52 3e-07
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 51 7e-07
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 51 1e-06
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 50 1e-06
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 50 2e-06
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 50 2e-06
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 50 2e-06
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 49 4e-06
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 48 9e-06
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 48 9e-06
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 48 9e-06
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 47 2e-05
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 46 2e-05
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 46 3e-05
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 46 3e-05
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 46 3e-05
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 46 3e-05
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 46 4e-05
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 46 4e-05
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 45 5e-05
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 45 5e-05
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 45 5e-05
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 45 5e-05
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 45 5e-05
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 45 6e-05
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 44 8e-05
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 44 8e-05
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 44 8e-05
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 44 8e-05
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 44 1e-04
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 44 1e-04
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 44 1e-04
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 44 1e-04
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 44 1e-04
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 44 1e-04
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 44 1e-04
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 44 1e-04
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 44 1e-04
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 44 1e-04
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 44 1e-04
At3g62770.2 68416.m07051 transport protein-related weak similari... 43 2e-04
At3g62770.1 68416.m07052 transport protein-related weak similari... 43 2e-04
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 43 2e-04
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 43 3e-04
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 42 3e-04
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 42 4e-04
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 42 4e-04
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 42 4e-04
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 42 6e-04
At5g05150.1 68418.m00547 transport protein-related contains 2 WD... 42 6e-04
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 41 8e-04
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 41 8e-04
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 41 8e-04
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 41 8e-04
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 40 0.001
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 40 0.001
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 40 0.001
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 40 0.001
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 40 0.001
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 40 0.001
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 40 0.001
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 40 0.001
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 40 0.001
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 40 0.002
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 40 0.002
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 40 0.002
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 40 0.002
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 40 0.002
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 39 0.003
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 39 0.003
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 39 0.003
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 39 0.004
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 39 0.004
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 38 0.006
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 38 0.006
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 38 0.007
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 38 0.010
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 38 0.010
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 38 0.010
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 38 0.010
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 38 0.010
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 37 0.013
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 37 0.013
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 37 0.013
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 37 0.013
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 37 0.013
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 37 0.013
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 37 0.013
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 37 0.013
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 37 0.017
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 37 0.017
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 37 0.017
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 36 0.022
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 36 0.022
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 36 0.029
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 36 0.029
At4g21530.1 68417.m03111 transducin family protein / WD-40 repea... 36 0.029
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 36 0.029
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 36 0.029
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 36 0.039
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 36 0.039
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 36 0.039
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 36 0.039
At2g46560.1 68415.m05808 transducin family protein / WD-40 repea... 35 0.051
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 35 0.068
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 34 0.12
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 34 0.12
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 34 0.12
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 34 0.12
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 34 0.12
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 34 0.12
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 33 0.16
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 33 0.16
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 33 0.16
At1g64350.1 68414.m07292 transducin family protein / WD-40 repea... 33 0.16
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 33 0.21
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 33 0.21
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 33 0.21
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 33 0.27
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 33 0.27
At3g56900.1 68416.m06329 aladin-related / adracalin-related weak... 33 0.27
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 33 0.27
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 33 0.27
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 32 0.36
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 32 0.36
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 32 0.36
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 32 0.48
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 32 0.48
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 32 0.48
At2g19540.1 68415.m02283 transducin family protein / WD-40 repea... 32 0.48
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 31 0.63
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 31 0.63
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 31 0.63
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 31 0.63
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 31 0.63
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 31 0.84
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 31 0.84
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 31 0.84
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 31 0.84
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 31 0.84
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 31 0.84
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 31 0.84
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 31 0.84
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 31 0.84
At5g52250.1 68418.m06485 transducin family protein / WD-40 repea... 30 1.5
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 30 1.5
At1g08190.1 68414.m00905 vacuolar assembly protein, putative (VP... 30 1.5
At5g50970.1 68418.m06321 WD-40 repeat family protein contains Pf... 30 1.9
At4g21520.1 68417.m03110 transducin family protein / WD-40 repea... 30 1.9
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 30 1.9
At5g62370.1 68418.m07828 pentatricopeptide (PPR) repeat-containi... 29 2.6
At3g52190.1 68416.m05731 transducin family protein / WD-40 repea... 29 2.6
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 29 2.6
At3g13229.1 68416.m01664 hypothetical protein 29 2.6
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 29 2.6
At1g76910.1 68414.m08953 hypothetical protein 29 2.6
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 29 3.4
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 29 3.4
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 29 3.4
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 29 3.4
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 29 3.4
At5g11240.1 68418.m01313 transducin family protein / WD-40 repea... 29 4.5
At3g49400.1 68416.m05400 transducin family protein / WD-40 repea... 29 4.5
At3g33530.1 68416.m04290 transducin family protein / WD-40 repea... 29 4.5
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 29 4.5
At5g01680.1 68418.m00085 cation/hydrogen exchanger, putative (CH... 28 5.9
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 28 5.9
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 28 5.9
At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,... 28 5.9
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 28 5.9
At4g03830.1 68417.m00534 myosin heavy chain-related 28 7.8
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 28 7.8
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 135 bits (327), Expect = 3e-32
Identities = 63/139 (45%), Positives = 91/139 (65%), Gaps = 1/139 (0%)
Frame = -3
Query: 746 SVSDDNTMRVWDRXSGEEVQKVEFQSVPNSXELSRDGAILTVAHGTNVSFYTSDTMRKLR 567
S +D +R+WD SG+ VQ +E +S S E+S+DG +T A G+ V F+ ++ ++
Sbjct: 163 SCTDIGGVRLWDVRSGKIVQTLETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVK 222
Query: 566 EFPVPTKCYSASLAPSRAT-FVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDG 390
+ +P SASL P FV GG+D+ V +D++TG E+ N+GH GPVHCVR++P G
Sbjct: 223 SYDMPCNIESASLEPKSGNKFVAGGEDMWVRLFDFHTGKEIGCNKGHHGPVHCVRFAPTG 282
Query: 389 ELYASGSEDGTVRLWQAVP 333
E YASGSEDGT+R+WQ P
Sbjct: 283 ESYASGSEDGTIRIWQTGP 301
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 135 bits (327), Expect = 3e-32
Identities = 61/140 (43%), Positives = 91/140 (65%), Gaps = 1/140 (0%)
Frame = -3
Query: 761 NSRIVSVSDDNTMRVWDRXSGEEVQKVEFQSVPNSXELSRDGAILTVAHGTNVSFYTSDT 582
N+ + S +D +R+WD S + V +E +S S E+S+DG +T A G++V F+ +
Sbjct: 153 NTILSSCTDTGDIRLWDIRSDKIVHTLETKSPVTSAEVSQDGRYITTADGSSVKFWDAKN 212
Query: 581 MRKLREFPVPTKCYSASLAPSRA-TFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVR 405
L+ + +P SASL P TF+ GG+D+ V+++D+ TG E+ N+GH GPVHCVR
Sbjct: 213 FGLLKSYDMPCNVESASLEPKHGNTFIAGGEDMWVHRFDFQTGEEIGCNKGHHGPVHCVR 272
Query: 404 WSPDGELYASGSEDGTVRLW 345
++P GE Y SGSEDGTVR+W
Sbjct: 273 YAPGGESYTSGSEDGTVRIW 292
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = -3
Query: 755 RIVSVSDDNTMRVWDRXSGEEVQKVEFQSVPNSXELSRD 639
R S S D T ++W+ +G+E+ E + + + S D
Sbjct: 70 RAASASADFTAKIWNALTGDELHSFEHKHIVRACAFSED 108
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 132 bits (320), Expect = 2e-31
Identities = 63/139 (45%), Positives = 90/139 (64%), Gaps = 1/139 (0%)
Frame = -3
Query: 746 SVSDDNTMRVWDRXSGEEVQKVEFQSVPNSXELSRDGAILTVAHGTNVSFYTSDTMRKLR 567
S +D +R+WD SG+ VQ +E +S S E+S+DG +T A G+ V F+ ++ ++
Sbjct: 163 SCTDIGGVRLWDVRSGKIVQTLETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVK 222
Query: 566 EFPVPTKCYSASLAP-SRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDG 390
+ +P SASL P S FV GG+D+ V +D+ TG E+ N+GH GPVHCVR++P G
Sbjct: 223 SYDMPCNIESASLEPKSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTG 282
Query: 389 ELYASGSEDGTVRLWQAVP 333
YASGSEDGT+R+WQ P
Sbjct: 283 LSYASGSEDGTIRIWQTTP 301
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 132 bits (320), Expect = 2e-31
Identities = 63/139 (45%), Positives = 90/139 (64%), Gaps = 1/139 (0%)
Frame = -3
Query: 746 SVSDDNTMRVWDRXSGEEVQKVEFQSVPNSXELSRDGAILTVAHGTNVSFYTSDTMRKLR 567
S +D +R+WD SG+ VQ +E +S S E+S+DG +T A G+ V F+ ++ ++
Sbjct: 163 SCTDIGGVRLWDVRSGKIVQTLETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVK 222
Query: 566 EFPVPTKCYSASLAP-SRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDG 390
+ +P SASL P S FV GG+D+ V +D+ TG E+ N+GH GPVHCVR++P G
Sbjct: 223 SYDMPCNIESASLEPKSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTG 282
Query: 389 ELYASGSEDGTVRLWQAVP 333
YASGSEDGT+R+WQ P
Sbjct: 283 LSYASGSEDGTIRIWQTTP 301
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 60.9 bits (141), Expect = 9e-10
Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 19/157 (12%)
Frame = -3
Query: 761 NSRIVSVSDDNTMRVWDRXSGEEVQKVEFQ-----SVPNSXELSRDGAILTVAHGTNVSF 597
N IVS +D +R+WD +G+ +++ + + ++ + + + D LT +H
Sbjct: 187 NQTIVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKL 246
Query: 596 YTSDTMRKLREFPVPTKCYSASLAPSRATFVCGG--DDLKVYKYDYNTGT---------- 453
+ T+ ++ + + +++P V GG D V D+ G
Sbjct: 247 WDMRTLTLIKTYTTVVPVNAVAMSPLLNHVVLGGGQDASAVTTTDHRAGKFEAKFYDTIL 306
Query: 452 --ELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRL 348
E+ +GHFGP++ + +SPDG+ ++SG EDG VRL
Sbjct: 307 QEEIGGVKGHFGPINALAFSPDGKSFSSGGEDGYVRL 343
Score = 48.4 bits (110), Expect = 5e-06
Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 18/157 (11%)
Frame = -3
Query: 761 NSRIVSVSDDNTMRVWDRXSGEEVQKVEFQSVPNSXELSRDG--AILTVAH--GTNVSFY 594
+SR+++ S D T ++WD SG+E+ +F + S + S A++T H GT+ + +
Sbjct: 91 SSRLITGSADQTAKLWDVKSGKELFTFKFGAPARSVDFSVGDHLAVITTDHFVGTSSAIH 150
Query: 593 -----------TSDTMRKLREFPVPTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTEL 447
D++ L+ K A P T V GG+D + +D TG L
Sbjct: 151 VKRIAEDPEDQVGDSVLVLQSPDGKKKINRAVWGPLNQTIVSGGEDAAIRIWDAETGKLL 210
Query: 446 ESNR---GHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
+ + GH + + + D + +GS D T +LW
Sbjct: 211 KQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLW 247
Score = 36.7 bits (81), Expect = 0.017
Identities = 21/61 (34%), Positives = 26/61 (42%)
Frame = -3
Query: 509 FVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPG 330
F C D + N G L + RGH G V C S D +GS D T +LW G
Sbjct: 53 FSCAKDHTPTVWFADN-GERLGTYRGHSGAVWCCDISRDSSRLITGSADQTAKLWDVKSG 111
Query: 329 R 327
+
Sbjct: 112 K 112
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = -3
Query: 437 RGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGRAYGLWR 309
+GH P+ +R++ +G+L S ++D T +W A G G +R
Sbjct: 34 KGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYR 76
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 404 WSPDGELYASGSEDGTVRLWQAVPGR 327
W P + SG ED +R+W A G+
Sbjct: 183 WGPLNQTIVSGGEDAAIRIWDAETGK 208
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 58.4 bits (135), Expect = 5e-09
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 19/157 (12%)
Frame = -3
Query: 761 NSRIVSVSDDNTMRVWDRXSGEEVQKVEFQ-----SVPNSXELSRDGAILTVAHGTNVSF 597
N IVS +D +R+WD +G+ +++ + + + + + + D LT +
Sbjct: 160 NQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Query: 596 YTSDTMRKLREFPVPTKCYSASLAPSRATFVCGG--DDLKVYKYDYNTGT---------- 453
+ T+ L+ + + SL+P V GG D V D+ G
Sbjct: 220 WDMRTLTLLKTYTTVVPVNAVSLSPLLNHVVLGGGQDASAVTTTDHRAGKFEAKFYDKIL 279
Query: 452 --ELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRL 348
E+ +GHFGP++ + ++PDG+ ++SG EDG VRL
Sbjct: 280 QEEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYVRL 316
Score = 41.9 bits (94), Expect = 4e-04
Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 18/157 (11%)
Frame = -3
Query: 761 NSRIVSVSDDNTMRVWDRXSGEEVQKVEFQSVPNSXELSRDG--AILTVAH------GTN 606
+SR+++ S D T ++WD SG+E+ +F + S + + A++T H +
Sbjct: 64 SSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRTAAIH 123
Query: 605 VSFYTSDTMRKLREFPVPTKC-------YSASLAPSRATFVCGGDDLKVYKYDYNTGTEL 447
V D + E + C A P T V GG+D + +D TG L
Sbjct: 124 VKRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLL 183
Query: 446 ESNR---GHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
+ + GH + + + D + +GS D T +LW
Sbjct: 184 KQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLW 220
Score = 36.3 bits (80), Expect = 0.022
Identities = 21/61 (34%), Positives = 26/61 (42%)
Frame = -3
Query: 509 FVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPG 330
F C D + N G L + RGH G V C S D +GS D T +LW G
Sbjct: 26 FSCAKDHTPTLWFADN-GERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSG 84
Query: 329 R 327
+
Sbjct: 85 K 85
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -3
Query: 437 RGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGRAYGLWRRAN 300
+GH P+ +R++ +G+L S ++D T LW A G G +R N
Sbjct: 7 KGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHN 52
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 404 WSPDGELYASGSEDGTVRLWQAVPGR 327
W P + SG ED +R+W A G+
Sbjct: 156 WGPLNQTIVSGGEDKVIRIWDAETGK 181
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 58.4 bits (135), Expect = 5e-09
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 19/157 (12%)
Frame = -3
Query: 761 NSRIVSVSDDNTMRVWDRXSGEEVQKVEFQ-----SVPNSXELSRDGAILTVAHGTNVSF 597
N IVS +D +R+WD +G+ +++ + + + + + + D LT +
Sbjct: 160 NQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Query: 596 YTSDTMRKLREFPVPTKCYSASLAPSRATFVCGG--DDLKVYKYDYNTGT---------- 453
+ T+ L+ + + SL+P V GG D V D+ G
Sbjct: 220 WDMRTLTLLKTYTTVVPVNAVSLSPLLNHVVLGGGQDASAVTTTDHRAGKFEAKFYDKIL 279
Query: 452 --ELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRL 348
E+ +GHFGP++ + ++PDG+ ++SG EDG VRL
Sbjct: 280 QEEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYVRL 316
Score = 41.9 bits (94), Expect = 4e-04
Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 18/157 (11%)
Frame = -3
Query: 761 NSRIVSVSDDNTMRVWDRXSGEEVQKVEFQSVPNSXELSRDG--AILTVAH------GTN 606
+SR+++ S D T ++WD SG+E+ +F + S + + A++T H +
Sbjct: 64 SSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRTAAIH 123
Query: 605 VSFYTSDTMRKLREFPVPTKC-------YSASLAPSRATFVCGGDDLKVYKYDYNTGTEL 447
V D + E + C A P T V GG+D + +D TG L
Sbjct: 124 VKRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLL 183
Query: 446 ESNR---GHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
+ + GH + + + D + +GS D T +LW
Sbjct: 184 KQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLW 220
Score = 36.3 bits (80), Expect = 0.022
Identities = 21/61 (34%), Positives = 26/61 (42%)
Frame = -3
Query: 509 FVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPG 330
F C D + N G L + RGH G V C S D +GS D T +LW G
Sbjct: 26 FSCAKDHTPTLWFADN-GERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSG 84
Query: 329 R 327
+
Sbjct: 85 K 85
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -3
Query: 437 RGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGRAYGLWRRAN 300
+GH P+ +R++ +G+L S ++D T LW A G G +R N
Sbjct: 7 KGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHN 52
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 404 WSPDGELYASGSEDGTVRLWQAVPGR 327
W P + SG ED +R+W A G+
Sbjct: 156 WGPLNQTIVSGGEDKVIRIWDAETGK 181
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 54.8 bits (126), Expect = 6e-08
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 3/145 (2%)
Frame = -3
Query: 758 SRIVSVSDDNTMRVWDRXSGEEVQKV-EFQSVPNSXELSRDGAILTVAHGTNVSFYTSDT 582
S+IVS S D T+R WD +G++++K+ E S NS +R G L ++ + + D
Sbjct: 109 SQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDM 168
Query: 581 MRK--LREFPVPTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCV 408
++ ++ FP + + S + + GG D V +D G + GH + +
Sbjct: 169 RQRGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGM 228
Query: 407 RWSPDGELYASGSEDGTVRLWQAVP 333
SPDG + D + +W P
Sbjct: 229 SLSPDGSYLLTNGMDNKLCVWDMRP 253
Score = 35.5 bits (78), Expect = 0.039
Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = -3
Query: 554 PTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTE-LESNRGHFGPVHCVRWSPDGELYA 378
P+ Y+ P+ G D +++ + + + +GH + + W+ DG
Sbjct: 53 PSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQIV 112
Query: 377 SGSEDGTVRLWQAVPGR 327
S S D TVR W G+
Sbjct: 113 SASPDKTVRAWDVETGK 129
Score = 31.9 bits (69), Expect = 0.48
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -3
Query: 434 GHFGPVHCVRWSPDGELYASGSEDGTVRLWQ 342
GH V+ ++++P G L ASGS D + LW+
Sbjct: 51 GHPSAVYTMKFNPAGTLIASGSHDREIFLWR 81
Score = 30.3 bits (65), Expect = 1.5
Identities = 34/153 (22%), Positives = 55/153 (35%), Gaps = 11/153 (7%)
Frame = -3
Query: 752 IVSVSDDNTMRVWDRXSGEEVQKVEFQSVPNSXELSRDGAILTVAHGTNVSFYTSDTMRK 573
I+S SDD T ++WD +Q + + S D A G + D +
Sbjct: 154 IISGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFS-DAADKIFTGGVDNDVKVWDLRKG 212
Query: 572 LREFPVP---TKCYSASLAPSRATFVCGGDDLKVYKYDY------NTGTELESNRGHFGP 420
+ SL+P + + G D K+ +D N ++ H
Sbjct: 213 EATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFE 272
Query: 419 VHCVR--WSPDGELYASGSEDGTVRLWQAVPGR 327
+ ++ WSPDG +GS D V +W R
Sbjct: 273 KNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRR 305
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 54.0 bits (124), Expect = 1e-07
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 10/146 (6%)
Frame = -3
Query: 752 IVSVSDDNTMRVWDRXSGEEVQKVEFQSVPNSXELSRDGA-ILTVAHGTNVSFYTSDTMR 576
+VSV D+ + ++DR + E + +E + + S LS D IL + + +
Sbjct: 418 LVSVCKDSVISLFDREATVE-RLIEEEDMITSFSLSNDNKYILVNLLNQEIRLWNIEGDP 476
Query: 575 KL--------REFPVPTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGP 420
K+ R + C+ +A G +D +VY + +TG + GH G
Sbjct: 477 KIVSRYKGHKRSRFIIRSCFGGY---KQAFIASGSEDSQVYIWHRSTGKLIVELPGHAGA 533
Query: 419 VHCVRWSPDG-ELYASGSEDGTVRLW 345
V+CV WSP + AS S+DGT+R+W
Sbjct: 534 VNCVSWSPTNLHMLASASDDGTIRIW 559
Score = 36.3 bits (80), Expect = 0.022
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = -3
Query: 518 RATFVCGGDDLKVYKYDYNTGTELES-NRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQ 342
R CG +++ + ++D ++G + +G P+ C W PDG+ +G D ++ +W
Sbjct: 332 RQVLTCGAEEV-IRRWDVDSGDCVHMYEKGGISPISC-GWYPDGQGIIAGMTDRSICMWD 389
Query: 341 AVPGRAYGLWR 309
+ GR W+
Sbjct: 390 -LDGREKECWK 399
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/54 (24%), Positives = 24/54 (44%)
Frame = -3
Query: 434 GHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGRAYGLWRRANETAPLANGY 273
GH PV + WSPD + + +R W G ++ + +P++ G+
Sbjct: 317 GHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGG-ISPISCGW 369
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 54.0 bits (124), Expect = 1e-07
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 5/137 (3%)
Frame = -3
Query: 740 SDDNTMRVWDRXSGE-EVQKVEFQSVPNSXELSRDG-AILTVAHGTNVSFYTSDTMRKLR 567
+DDN ++VW+ SG + E + + D ++L+ + V + + +
Sbjct: 368 ADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYK 427
Query: 566 EFPVPTKCYSASL-APSRATFVCGG--DDLKVYKYDYNTGTELESNRGHFGPVHCVRWSP 396
+ PT SL A VC G D +++ + TG + GH PVH + +SP
Sbjct: 428 TYTTPTPRQFVSLTADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSP 487
Query: 395 DGELYASGSEDGTVRLW 345
+L AS S D TVRLW
Sbjct: 488 LTQLLASSSWDYTVRLW 504
Score = 50.4 bits (115), Expect = 1e-06
Identities = 18/51 (35%), Positives = 33/51 (64%)
Frame = -3
Query: 473 YDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGRAY 321
+D+ T T + +GH+ V+CV +SPD +L A+G++D V++W + G +
Sbjct: 334 WDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCF 384
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = -3
Query: 527 APSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRL 348
+P G DD KV ++ +GT + H V + + D S S DGTVR
Sbjct: 358 SPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRA 417
Query: 347 W 345
W
Sbjct: 418 W 418
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 54.0 bits (124), Expect = 1e-07
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 5/137 (3%)
Frame = -3
Query: 740 SDDNTMRVWDRXSGE-EVQKVEFQSVPNSXELSRDG-AILTVAHGTNVSFYTSDTMRKLR 567
+DDN ++VW+ SG + E + + D ++L+ + V + + +
Sbjct: 408 ADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYK 467
Query: 566 EFPVPTKCYSASL-APSRATFVCGG--DDLKVYKYDYNTGTELESNRGHFGPVHCVRWSP 396
+ PT SL A VC G D +++ + TG + GH PVH + +SP
Sbjct: 468 TYTTPTPRQFVSLTADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSP 527
Query: 395 DGELYASGSEDGTVRLW 345
+L AS S D TVRLW
Sbjct: 528 LTQLLASSSWDYTVRLW 544
Score = 50.4 bits (115), Expect = 1e-06
Identities = 18/51 (35%), Positives = 33/51 (64%)
Frame = -3
Query: 473 YDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGRAY 321
+D+ T T + +GH+ V+CV +SPD +L A+G++D V++W + G +
Sbjct: 374 WDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCF 424
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = -3
Query: 527 APSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRL 348
+P G DD KV ++ +GT + H V + + D S S DGTVR
Sbjct: 398 SPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRA 457
Query: 347 W 345
W
Sbjct: 458 W 458
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 53.2 bits (122), Expect = 2e-07
Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 8/144 (5%)
Frame = -3
Query: 752 IVSVSDDNTMRVWDRXSGEEVQKVEFQSVP-NSXELSRDGA-ILTVAHGTNVSFYTS--- 588
IVS S D T+R+W+ +G+ V+ ++ S+P +S +RDG+ I++ +H + + +
Sbjct: 143 IVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEG 202
Query: 587 DTMRKLREFPVPTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCV 408
++ L + P + A +P+ + D + +Y TG L+ GH V C+
Sbjct: 203 TCLKTLIDDKSPAVSF-AKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCI 261
Query: 407 RWS---PDGELYASGSEDGTVRLW 345
+ +G+ SGSED V LW
Sbjct: 262 TSAFSVTNGKYIVSGSEDNCVYLW 285
Score = 41.5 bits (93), Expect = 6e-04
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = -3
Query: 521 SRATFVCGG-DDLKVYKYDYNTGTE-LESNRGHFGPVHCVRWSPDGELYASGSEDGTVRL 348
S + + C DD + +D + E L+ RGH V CV ++P L SGS D T+R+
Sbjct: 95 SDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRI 154
Query: 347 WQAVPGR 327
W+ G+
Sbjct: 155 WEVKTGK 161
Score = 40.7 bits (91), Expect = 0.001
Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 9/148 (6%)
Frame = -3
Query: 758 SRIVSVSDDNTMRVWDRXSGEEVQKVEFQSVP--NSXELSRDGAILTVAH-GTNVSFYTS 588
S IVS S D + ++WD G ++ + P + + S +G + VA + +
Sbjct: 183 SLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNY 242
Query: 587 DTMRKLREFPVPTK---CYSASLAPSRATF-VCGGDDLKVYKYDYNTGTELESNRGHFGP 420
T + L+ + T C +++ + + + V G +D VY +D L+ GH
Sbjct: 243 ATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDA 302
Query: 419 VHCVRWSP-DGELYASGSE-DGTVRLWQ 342
V V P E+ +SG+ D T+R+W+
Sbjct: 303 VISVSCHPVQNEISSSGNHLDKTIRIWK 330
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = -3
Query: 542 YSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSED 363
+ + P V G D + ++ TG + + H P+ V ++ DG L S S D
Sbjct: 132 FCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHD 191
Query: 362 GTVRLWQAVPG 330
G+ ++W A G
Sbjct: 192 GSCKIWDAKEG 202
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -3
Query: 467 YNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQA 339
Y L++ GH + CV++S DG L AS S D T+ LW A
Sbjct: 30 YKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSA 72
Score = 31.1 bits (67), Expect = 0.84
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 434 GHFGPVHCVRWSPDGELYASGSEDGTVRLWQA 339
GH + + WS D S S+D T+R+W A
Sbjct: 83 GHSSGISDLAWSSDSHYTCSASDDCTLRIWDA 114
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 52.8 bits (121), Expect = 2e-07
Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 4/142 (2%)
Frame = -3
Query: 755 RIVSVSDDNTMRVWDRXSGEEVQK--VEFQSVPNSXELSRDGA-ILTVAHGTNVSFYTSD 585
R+VS SDD TM +W+ ++ +K Q + N S DG I + + +V +
Sbjct: 331 RLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGI 390
Query: 584 TMRKLREFPVPT-KCYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCV 408
T + + F Y S + + G D + ++ T + GH V V
Sbjct: 391 TGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAV 450
Query: 407 RWSPDGELYASGSEDGTVRLWQ 342
WSPDGE SG +D ++LW+
Sbjct: 451 DWSPDGEKVVSGGKDRVLKLWK 472
Score = 48.0 bits (109), Expect = 7e-06
Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 3/151 (1%)
Frame = -3
Query: 752 IVSVSDDNTMRVWDRXSGEEVQKVEFQSV-PNSXELSRDGAILTVAHG-TNVSFYTSDTM 579
I + S D T+++W+ G+ +++++ NS LS + + T A T + ++
Sbjct: 255 IYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALSTEYVLRTGAFDHTGRQYPPNEEK 314
Query: 578 RKLREFPVPTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESN-RGHFGPVHCVRW 402
+K E Y+ + S V G DD ++ ++ + + + GH V+ V +
Sbjct: 315 QKALER------YNKTKGDSPERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYF 368
Query: 401 SPDGELYASGSEDGTVRLWQAVPGRAYGLWR 309
SPDG+ AS S D +VRLW + G+ ++R
Sbjct: 369 SPDGKWIASASFDKSVRLWNGITGQFVTVFR 399
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/72 (34%), Positives = 32/72 (44%)
Frame = -3
Query: 533 SLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTV 354
S +P G D V +D T T L + +GH V V WSPDG+ SGS+ G +
Sbjct: 116 SFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEI 175
Query: 353 RLWQAVPGRAYG 318
W G G
Sbjct: 176 CCWNPKKGELEG 187
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/30 (63%), Positives = 21/30 (70%)
Frame = -3
Query: 434 GHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
GH V CV +SPDG+ ASGS D TVRLW
Sbjct: 107 GHAEAVLCVSFSPDGKQLASGSGDTTVRLW 136
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = -3
Query: 509 FVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPG 330
FV D +D + GH V CV+W DG +Y +GS+D T+++W+ G
Sbjct: 214 FVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDGIIY-TGSQDCTIKMWETTQG 272
Query: 329 R 327
+
Sbjct: 273 K 273
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 52.8 bits (121), Expect = 2e-07
Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 5/144 (3%)
Frame = -3
Query: 761 NSRIVSVSDDNTMRVWDRXSGE--EVQKVEFQSVP-NSXELSRDGAILTVA-HGTNVSFY 594
++ +++++ D+T+ +WD +G E+ ++ + P S + DG + V + + V +
Sbjct: 150 SANVLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLW 209
Query: 593 TSDTMRKLREFPVPTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTEL-ESNRGHFGPV 417
S + R+LR + SLA + GG D + D + + E+ RGH V
Sbjct: 210 DSASNRQLRTLKGGHQSRVGSLAWNNHILTTGGMDGLIINNDVRIRSPIVETYRGHTQEV 269
Query: 416 HCVRWSPDGELYASGSEDGTVRLW 345
++WS G+ ASG D V +W
Sbjct: 270 CGLKWSGSGQQLASGGNDNVVHIW 293
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = -3
Query: 491 DLKVYKYDYNTGT--ELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGR 327
D VY +D +TG+ EL + GPV + W+PDG A G + V+LW + R
Sbjct: 159 DHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNR 215
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = -3
Query: 473 YDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGRAYGLWRRANET 294
+ Y + ++ GH V + SPDG AS + D T+R W +G+ A +
Sbjct: 387 WKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFW-----NVFGVPETAKKA 441
Query: 293 APLA 282
AP A
Sbjct: 442 APKA 445
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 52.8 bits (121), Expect = 2e-07
Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 5/144 (3%)
Frame = -3
Query: 761 NSRIVSVSDDNTMRVWDRXSGE--EVQKVEFQSVP-NSXELSRDGAILTVA-HGTNVSFY 594
++ +++++ D+T+ +WD +G E+ ++ + P S + DG + V + + V +
Sbjct: 140 SANVLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLW 199
Query: 593 TSDTMRKLREFPVPTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTEL-ESNRGHFGPV 417
S + R+LR + SLA + GG D + D + + E+ RGH V
Sbjct: 200 DSASNRQLRTLKGGHQSRVGSLAWNNHILTTGGMDGLIINNDVRIRSPIVETYRGHTQEV 259
Query: 416 HCVRWSPDGELYASGSEDGTVRLW 345
++WS G+ ASG D V +W
Sbjct: 260 CGLKWSGSGQQLASGGNDNVVHIW 283
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = -3
Query: 491 DLKVYKYDYNTGT--ELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGR 327
D VY +D +TG+ EL + GPV + W+PDG A G + V+LW + R
Sbjct: 149 DHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNR 205
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = -3
Query: 473 YDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGRAYGLWRRANET 294
+ Y + ++ GH V + SPDG AS + D T+R W +G+ A +
Sbjct: 377 WKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFW-----NVFGVPETAKKA 431
Query: 293 APLA 282
AP A
Sbjct: 432 APKA 435
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 52.4 bits (120), Expect = 3e-07
Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 6/145 (4%)
Frame = -3
Query: 752 IVSVSDDNTMRVWDRXSGEEVQKVEFQSVPNSX-----ELSRDGAILTVAHGTNVSFYTS 588
I S S D + WD +G E + + + P E + L+ + + FY S
Sbjct: 6 IASSSIDEGIGSWDLKTGTEQLQFKPCASPAHGLTAVGEKFLASSQLSARNTSGSIFYWS 65
Query: 587 DTMRKLREFPVPTKCYSASLAPSRATFVCGGD-DLKVYKYDYNTGTELESNRGHFGPVHC 411
T + P + A A + T++ GG +Y ++ TG L+ GH+ V C
Sbjct: 66 WTKPQAEVKSYPVEPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTC 125
Query: 410 VRWSPDGELYASGSEDGTVRLWQAV 336
+ +S D L SGS+DG++R+W +
Sbjct: 126 LVFSGDDSLLVSGSQDGSIRVWSLI 150
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Frame = -3
Query: 572 LREFPVPTKCYSASLAPSRATFVCGGDDLKVYKYDYNT----GTELESNRGHFGP-VHCV 408
L+ P+ + +L P F G D K+Y N GT++ + G + C+
Sbjct: 210 LKNIIFPSVINALALDPGGCVFYAGARDSKIYIGAINATSEYGTQVLGSVSEKGKAITCL 269
Query: 407 RWSPDGELYASGSEDGTVRLW 345
+ DG L SGSEDG V +W
Sbjct: 270 AYCADGNLLISGSEDGVVCVW 290
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -3
Query: 761 NSRIVSVSDDNTMRVWDRXSGEEVQKVEFQSVPNSXELSRDGAI 630
N+ I+S S+D T +VW G+ ++ + F SV N+ L G +
Sbjct: 187 NAVIISSSEDRTCKVWSLSRGKLLKNIIFPSVINALALDPGGCV 230
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 51.2 bits (117), Expect = 7e-07
Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 5/143 (3%)
Frame = -3
Query: 758 SRIVSVSDDNTMRVWDRXSGEEVQKVE-FQSVPNSXELSRDGA-ILTVAHGTNVSFYTSD 585
S +VS D +++WD SG E+ + +++ S + +++G +LT + + Y
Sbjct: 281 SLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIR 340
Query: 584 TMRKLREFPVPTK-CYSASLAPSRAT-FVCGGDDLKVYKYDY-NTGTELESNRGHFGPVH 414
TM++L+ F TK S + P FV G D + + + ++E H V
Sbjct: 341 TMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGHENPQIEIPNAHDNSVW 400
Query: 413 CVRWSPDGELYASGSEDGTVRLW 345
+ W P G L SGS D T + W
Sbjct: 401 DLAWHPIGYLLCSGSNDHTTKFW 423
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/60 (33%), Positives = 33/60 (55%)
Frame = -3
Query: 524 PSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
P+++ V GG D V +D +G EL S GH V V+W+ +G + S+D ++L+
Sbjct: 278 PTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLY 337
Score = 34.7 bits (76), Expect = 0.068
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = -3
Query: 440 NRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGR 327
N GH V V W P L SG +D V+LW GR
Sbjct: 264 NAGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGR 301
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -3
Query: 437 RGHFGPVHCVRWSPDGELYASGSEDGTVRLWQ 342
+ H P+ + WS + SG + GT++ WQ
Sbjct: 162 QAHDQPIRSMVWSHNENYMVSGDDGGTLKYWQ 193
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 50.8 bits (116), Expect = 1e-06
Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 7/119 (5%)
Frame = -3
Query: 662 NSXELSRDGAILTVAHGTN-VSFYTSDTMRK-----LREFPVPTKCYSASLAPSRATFVC 501
+S + S DG +L A + YT +T+ ++EF S S A F+
Sbjct: 28 SSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFIV 87
Query: 500 GGDDLKVYK-YDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGR 327
D K K +D TG+ +++ GH CV ++P + SGS D TVR+W G+
Sbjct: 88 SASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGK 146
Score = 47.6 bits (108), Expect = 9e-06
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 7/145 (4%)
Frame = -3
Query: 758 SRIVSVSDDNTMRVWDRXSGEEVQK-VEFQSVPNSX-ELSRDGAILTVAHGTN-VSFYTS 588
S IVS S D R+WD +G V+ ++ ++ P S S +G + V N + +
Sbjct: 168 SLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNI 227
Query: 587 DTMRKLREFPVPTK---CYSASLAPSRAT-FVCGGDDLKVYKYDYNTGTELESNRGHFGP 420
+ + L+ + C S++ + + V G +D V+ ++ N+ L+ GH
Sbjct: 228 SSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTET 287
Query: 419 VHCVRWSPDGELYASGSEDGTVRLW 345
V V P L ASGS D TVR+W
Sbjct: 288 VMNVACHPTENLIASGSLDKTVRIW 312
Score = 43.2 bits (97), Expect = 2e-04
Identities = 35/148 (23%), Positives = 74/148 (50%), Gaps = 8/148 (5%)
Frame = -3
Query: 761 NSRIVSVSDDNTMRVWDRXSGEEVQKVEFQSVP-NSXELSRDGA-ILTVAHGTNVSFYTS 588
++ IVS S D T+R+WD +G+ ++ + S P + + +RDG+ I++ ++ + S
Sbjct: 125 SNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDS 184
Query: 587 DT---MRKLREFPVPTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPV 417
T ++ L + P + +P+ + G D + ++ ++ L++ GH
Sbjct: 185 GTGHCVKTLIDDENPPVSF-VRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQ 243
Query: 416 HCVRWS---PDGELYASGSEDGTVRLWQ 342
+C+ + +G+ SGSED V +W+
Sbjct: 244 YCISSAFSVTNGKRIVSGSEDNCVHMWE 271
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/71 (32%), Positives = 31/71 (43%)
Frame = -3
Query: 542 YSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSED 363
+ + P V G D V +D TG L+ H PV V ++ DG L S S D
Sbjct: 117 FCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYD 176
Query: 362 GTVRLWQAVPG 330
G R+W + G
Sbjct: 177 GLCRIWDSGTG 187
Score = 36.7 bits (81), Expect = 0.017
Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 4/140 (2%)
Frame = -3
Query: 752 IVSVSDDNTMRVWDRXSGEEVQK-VEFQSVPNSXELS-RDGAILTVAHGTNVSFYTSDTM 579
IVS SDD T+++WD +G ++ + + + + I++ + V + T
Sbjct: 86 IVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTG 145
Query: 578 RKLREFPVPTKCYSA-SLAPSRATFVCGGDDLKVYKYDYNTGTELES-NRGHFGPVHCVR 405
+ L+ P + +A + V D +D TG +++ PV VR
Sbjct: 146 KCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVR 205
Query: 404 WSPDGELYASGSEDGTVRLW 345
+SP+G+ G+ D T+RLW
Sbjct: 206 FSPNGKFILVGTLDNTLRLW 225
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 50.4 bits (115), Expect = 1e-06
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Frame = -3
Query: 542 YSASLAPSRATFVCGGDDLKVYKYDY-NTGTE---LESNRGHFGPVHCVRWSPDGELYAS 375
+S + P+ F GG D K D N T+ L + R HFG V+CVRW+ + AS
Sbjct: 17 FSIDVQPNGERFATGGGDHKSVDKDLQNIDTKERLLATLRDHFGSVNCVRWAKNSRYVAS 76
Query: 374 GSEDGTVRLWQAVPGRAYGLWRRANETAPLANGYKEV 264
GS+D +++ + PG G + AP +K V
Sbjct: 77 GSDDQVIQIHERKPGS--GTTEFGSGEAPDVENWKAV 111
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = -3
Query: 527 APSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRL 348
+P + G D V+ ++ TG RGH V V W P G AS S+D TV +
Sbjct: 127 SPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGSFIASQSDDKTVII 186
Query: 347 WQ 342
W+
Sbjct: 187 WR 188
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = -3
Query: 437 RGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPG 330
RGH V + WSPD + ASGS D TV +W G
Sbjct: 115 RGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTG 150
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/143 (20%), Positives = 65/143 (45%), Gaps = 6/143 (4%)
Frame = -3
Query: 752 IVSVSDDNTMRVWDRXSGEEVQKVEFQSVPNSXEL--SRDGA-ILTVAHGTNVSFYTSDT 582
++S D +++WD + + + ++ S DG+ LT + N+ ++ ++T
Sbjct: 298 LLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTET 357
Query: 581 MRKLREFPVPTKCYSASLAPS---RATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHC 411
+ + F Y L P + + G D K+ ++D NTG + H G V+
Sbjct: 358 GQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDINTGEVTQEYDQHLGAVNT 417
Query: 410 VRWSPDGELYASGSEDGTVRLWQ 342
+ + + + + S+D ++R+W+
Sbjct: 418 ITFVDNNRRFVTSSDDKSLRVWE 440
Score = 32.7 bits (71), Expect = 0.27
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = -3
Query: 497 GDDLKVYKYD-YNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGR 327
G D KV +D YN+G + + GH V + +S DG + + D ++ W G+
Sbjct: 302 GMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTETGQ 359
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 49.6 bits (113), Expect = 2e-06
Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 5/144 (3%)
Frame = -3
Query: 761 NSRIVSVSDDNTMRVWDRXSGEEVQKV---EFQSVPNSXELSRDGAILTVA-HGTNVSFY 594
+S +++++ +T+ +WD SG + V E + S ++DG L + + V +
Sbjct: 102 SSNVLAIALGDTVYLWDASSGSTYKLVTIDEEEGPVTSINWTQDGLDLAIGLDNSEVQLW 161
Query: 593 TSDTMRKLREFPVPTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTEL-ESNRGHFGPV 417
+ R++R + SLA + GG D K+ D + + E+ GH V
Sbjct: 162 DCVSNRQVRTLRGGHESRVGSLAWNNHILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEV 221
Query: 416 HCVRWSPDGELYASGSEDGTVRLW 345
++WS G+ ASG D V +W
Sbjct: 222 CGLKWSESGKKLASGGNDNVVHIW 245
Score = 34.7 bits (76), Expect = 0.068
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = -3
Query: 482 VYKYDYNTGT--ELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGRAYGLWR 309
VY +D ++G+ +L + GPV + W+ DG A G ++ V+LW V R R
Sbjct: 114 VYLWDASSGSTYKLVTIDEEEGPVTSINWTQDGLDLAIGLDNSEVQLWDCVSNRQVRTLR 173
Query: 308 RANET 294
+E+
Sbjct: 174 GGHES 178
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -3
Query: 473 YDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
+ Y + ++ GH V + SPDG AS + D T+RLW
Sbjct: 340 WKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLW 382
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/76 (32%), Positives = 37/76 (48%)
Frame = -3
Query: 572 LREFPVPTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPD 393
++ F P ASL+P GD+ + D NTG LE+ GH W PD
Sbjct: 271 VKHFRFPWPVNHASLSPDGKLLAIVGDNPEGLIVDPNTGKTLETLSGHLDFSFASAWHPD 330
Query: 392 GELYASGSEDGTVRLW 345
G +++G++D T R+W
Sbjct: 331 GVTFSTGNQDKTCRVW 346
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -3
Query: 482 VYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGT 357
V+ YD + G E E FG + + +SPD E G D T
Sbjct: 386 VHVYDVSNGYETEQEIDFFGEISGISFSPDTEALFIGVWDRT 427
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 48.8 bits (111), Expect = 4e-06
Identities = 26/116 (22%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Frame = -3
Query: 680 EFQSVPNSXELSRDGA----ILTVAHGTNVSFYTSDTMRKLREFPVPTKCYSASLAPSRA 513
E ++ N+ ++ RD + ++T + + + + + ++ EF + + S++P
Sbjct: 202 EDNAITNTVDIYRDPSGSLRLITANNDCKIRVFDAQSFTRVSEFALDWSVNNTSVSPDGK 261
Query: 512 TFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
GD + D ++G + S RGH W P+G + A+G++D RLW
Sbjct: 262 LLAVVGDSTECLISDSHSGKVISSLRGHKDYSFASAWHPNGLILATGNQDTACRLW 317
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 47.6 bits (108), Expect = 9e-06
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 5/144 (3%)
Frame = -3
Query: 761 NSRIVSVSDDNTMRVWDRXSGEEVQKV---EFQSVPNSXELSRDGAILTVA-HGTNVSFY 594
++ +++++ +T+ +WD SG + V E + S ++DG L V + V +
Sbjct: 136 SANVLAIALGDTVYLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLW 195
Query: 593 TSDTMRKLREFPVPTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTEL-ESNRGHFGPV 417
+ R++R + SLA GG D K+ D + + E+ GH V
Sbjct: 196 DCVSNRQVRTLRGGHESRVGSLAWDNHILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEV 255
Query: 416 HCVRWSPDGELYASGSEDGTVRLW 345
++WS G ASG D V +W
Sbjct: 256 CGLKWSESGNKQASGGNDNVVHIW 279
Score = 35.9 bits (79), Expect = 0.029
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = -3
Query: 482 VYKYDYNTGT--ELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGRAYGLWR 309
VY +D ++G+ EL + GPV + W+ DG A G ++ V+LW V R R
Sbjct: 148 VYLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDCVSNRQVRTLR 207
Query: 308 RANET 294
+E+
Sbjct: 208 GGHES 212
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 47.6 bits (108), Expect = 9e-06
Identities = 44/144 (30%), Positives = 64/144 (44%), Gaps = 9/144 (6%)
Frame = -3
Query: 737 DDNTMRVWD-RXSGEEVQKVEFQSVPN---SXELSRDGAILTVAHGT----NVSFYT-SD 585
+D ++ +WD R + + V+F S P S S DG I A N++ T S
Sbjct: 239 EDGSILLWDIRNAKIPLTSVKFHSEPVLSLSVASSCDGGISGGADDKIVMYNLNHSTGSC 298
Query: 584 TMRKLREFPVPTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVR 405
T+RK P ++ + G D ++ Y+Y G L + H + V
Sbjct: 299 TIRKEITLERPGVSGTSIRVDGKIAATAGWDH-RIRVYNYRKGNALAILKYHRATCNAVS 357
Query: 404 WSPDGELYASGSEDGTVRLWQAVP 333
+SPD EL AS SED TV LW+ P
Sbjct: 358 YSPDCELMASASEDATVALWKLYP 381
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -3
Query: 437 RGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGRAY-GLWRRANETAPLA 282
RGH V V + P L +GS DG +R+W + RA W + LA
Sbjct: 14 RGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGVLA 66
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 47.6 bits (108), Expect = 9e-06
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = -3
Query: 542 YSASLAPSRATFVC-GGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSE 366
Y+ + +P+ AT V GG D K + + G GH V C+ +S DG+L ASG
Sbjct: 74 YALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLASGGL 133
Query: 365 DGTVRLWQAVPG 330
DG V+++ A G
Sbjct: 134 DGVVQIFDASSG 145
Score = 35.5 bits (78), Expect = 0.039
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = -3
Query: 506 VCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
+ G +D ++ ++ + L GH V C ++PDG+L +GS+D ++ +W
Sbjct: 171 LAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVW 224
Score = 35.1 bits (77), Expect = 0.051
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -3
Query: 500 GGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQA 339
GG D V +D ++GT G + VRW P G + +GSED ++ +W A
Sbjct: 131 GGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWNA 184
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = -3
Query: 506 VCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDG---ELYASGSEDGTVRLW 345
+ G D V+ + TG + S H V CV++SP L A+G D + +W
Sbjct: 258 ISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIW 314
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Frame = -3
Query: 506 VC-GGDDLKVYKYDYNTGTELESNRGHFGPVH-----CVRWSPDGELYASGSEDGTVRLW 345
+C G DD + ++ T + +GH P H C+ + + L SGS+DG+V +
Sbjct: 212 ICTGSDDASLIVWNPKTCESIHIVKGH--PYHTEGLTCLDINSNSSLAISGSKDGSVHIV 269
Query: 344 QAVPGR 327
V G+
Sbjct: 270 NIVTGK 275
Score = 27.9 bits (59), Expect = 7.8
Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 3/95 (3%)
Frame = -3
Query: 605 VSFYTSDTMRKLREFPVPTKCYSASLAPSRATF---VCGGDDLKVYKYDYNTGTELESNR 435
V+ T + L +C S PS AT GG D K+ +D T
Sbjct: 269 VNIVTGKVVSSLNSHTDSVECVKFS--PSSATIPLAATGGMDKKLIIWDLQHSTPRFICE 326
Query: 434 GHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPG 330
G V + W + A+G +GTV +W ++ G
Sbjct: 327 HEEG-VTSLTWIGTSKYLATGCANGTVSIWDSLLG 360
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/60 (36%), Positives = 33/60 (55%)
Frame = -3
Query: 506 VCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGR 327
+ G DD +DY T + +++ GH V V + P+ + +GSEDGTVR+W A R
Sbjct: 203 ITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWHATTYR 262
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Frame = -3
Query: 632 ILTVAHGTNVSFYTSDTMRKLREFPVPT-KCYSASLAPSRATFVCGGDDLKVYKYDYNTG 456
IL + + + T ++ F V SA + V G DD+ + Y+YNT
Sbjct: 30 ILASLYSGTLCIWNYQTQTMVKSFDVTELPVRSAKFIARKQWVVAGADDMFIRVYNYNTM 89
Query: 455 TELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
+++ H + CV P S S+D ++LW
Sbjct: 90 DKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLW 126
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = -3
Query: 533 SLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTV 354
+++ R V G DDL V +D T LE +GH V CV+ GE + + DGTV
Sbjct: 904 AISSDRGKIVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKML-SGERVLTAAHDGTV 962
Query: 353 RLW 345
++W
Sbjct: 963 KMW 965
Score = 44.0 bits (99), Expect = 1e-04
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 5/147 (3%)
Frame = -3
Query: 755 RIVSVSDDNTMRVWDRXSGEEVQKVE-FQSVPNSXELSRDGAILTVAHGTNVSFYTSDTM 579
+IVS SDD ++ VWD+ + + +++++ S + ++ +LT AH V + D
Sbjct: 911 KIVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKMLSGERVLTAAHDGTVKMW--DVR 968
Query: 578 RKLREFPVPTKCYSASLA----PSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHC 411
+ V +C SA L+ S G D +D +G ++ +GH +
Sbjct: 969 TDMCVATV-GRCSSAILSLEYDDSTGILAAAGRDTVANIWDIRSGKQMHKLKGHTKWIRS 1027
Query: 410 VRWSPDGELYASGSEDGTVRLWQAVPG 330
+R D +GS+D T R+W G
Sbjct: 1028 IRMVED--TLITGSDDWTARVWSVSRG 1052
Score = 44.0 bits (99), Expect = 1e-04
Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 2/140 (1%)
Frame = -3
Query: 755 RIVSVSDDNTMRVWDRXSGEEVQKV-EFQSVPNSXELSRDGAILTVA-HGTNVSFYTSDT 582
R+++ + D T+++WD + V V S S E IL A T + + +
Sbjct: 952 RVLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTGILAAAGRDTVANIWDIRS 1011
Query: 581 MRKLREFPVPTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRW 402
+++ + TK + S+ T + G DD + + G+ H GPV V +
Sbjct: 1012 GKQMHKLKGHTK-WIRSIRMVEDTLITGSDDWTARVWSVSRGSCDAVLACHAGPVQSVEY 1070
Query: 401 SPDGELYASGSEDGTVRLWQ 342
SP + +GS DG +R W+
Sbjct: 1071 SPFDKGIITGSADGLLRFWE 1090
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = -3
Query: 521 SRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
+ +F D +Y ++ GH G V+CV+W P G L AS S+D T ++W
Sbjct: 417 NNVSFATSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIW 475
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = -3
Query: 512 TFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVP 333
T D V +D G L S GH PV+ + +SP+GE ASGS D ++ +W
Sbjct: 513 TLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKE 572
Query: 332 GR 327
G+
Sbjct: 573 GK 574
Score = 38.3 bits (85), Expect = 0.006
Identities = 44/163 (26%), Positives = 63/163 (38%), Gaps = 21/163 (12%)
Frame = -3
Query: 752 IVSVSDDNTMRVWDRXSGEEVQKVEFQSVPNSXELSRDGAILTVAHGTNVSFYTSDTMRK 573
+++ S D T VWD + E Q+ EF S P L V NVSF TS T
Sbjct: 380 LLTGSVDRTAVVWDVKAEEWKQQFEFHSGPT----------LDVDWRNNVSFATSSTDSM 429
Query: 572 LREFPV----PTKCYSASLA--------PSRATFVCGGDDLKVYKYDYNTGTELESNRGH 429
+ + P K ++ P+ + DD ++ T + R H
Sbjct: 430 IYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREH 489
Query: 428 FGPVHCVRWSPDGE---------LYASGSEDGTVRLWQAVPGR 327
++ +RWSP G AS S D TV+LW A G+
Sbjct: 490 TKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGK 532
Score = 37.1 bits (82), Expect = 0.013
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -3
Query: 434 GHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPG 330
GH V WSP L ASGS D T R+W G
Sbjct: 263 GHTSEVCACAWSPSASLLASGSGDATARIWSIPEG 297
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -3
Query: 431 HFGPVHCVRWSPDGELYASGSEDGTVRLW 345
H GP+ ++W+ G+ +GS D T +W
Sbjct: 364 HKGPIFSLKWNKKGDYLLTGSVDRTAVVW 392
Score = 29.5 bits (63), Expect = 2.6
Identities = 27/147 (18%), Positives = 63/147 (42%), Gaps = 12/147 (8%)
Frame = -3
Query: 758 SRIVSVSDDNTMRVWD----------RXSGEEVQKVEFQSV-PNSXELSRDGAILTVAHG 612
S + S SDD+T ++W+ R +E+ + + P + ++ + + +
Sbjct: 461 SLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFD 520
Query: 611 TNVSFYTSDTMRKLREFPVPTK-CYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNR 435
+ V + ++ + L F + YS + +P+ G D ++ + G +++
Sbjct: 521 STVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYT 580
Query: 434 GHFGPVHCVRWSPDGELYASGSEDGTV 354
G+ G + V W+ +G A+ D +V
Sbjct: 581 GN-GGIFEVCWNKEGNKIAACFADNSV 606
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 46.0 bits (104), Expect = 3e-05
Identities = 23/76 (30%), Positives = 35/76 (46%)
Frame = -3
Query: 572 LREFPVPTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPD 393
+ +F P SL+P GD+ + D NTG L + GH W PD
Sbjct: 269 VNQFRFPWPVNHTSLSPDGKLLTIVGDNPESLLVDPNTGKTLATLSGHLDFSFASAWHPD 328
Query: 392 GELYASGSEDGTVRLW 345
G +++G++D T R+W
Sbjct: 329 GFTFSTGNQDKTCRVW 344
Score = 33.1 bits (72), Expect = 0.21
Identities = 31/140 (22%), Positives = 55/140 (39%), Gaps = 3/140 (2%)
Frame = -3
Query: 740 SDDNTMRVWDRXSGEEVQKVEFQSVPNSXELSRDGAILTVAHGTNVSFYTS-DTMRKLRE 564
++D +R +D + V + F N LS DG +LT+ S +T + L
Sbjct: 253 NNDCGVRDFDMERYQLVNQFRFPWPVNHTSLSPDGKLLTIVGDNPESLLVDPNTGKTLAT 312
Query: 563 FPVPTK-CYSASLAPSRATFVCGGDDLKVYKYDY-NTGTELESNRGHFGPVHCVRWSPDG 390
++++ P TF G D +D N + RG+ G + +R++ DG
Sbjct: 313 LSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIRNLSKSVAVLRGNLGAIRSIRYTSDG 372
Query: 389 ELYASGSEDGTVRLWQAVPG 330
+ A V ++ G
Sbjct: 373 KYMAMAEPADFVHVYDVSNG 392
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -3
Query: 482 VYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGT 357
V+ YD + G E E FG + + +SPD E G D T
Sbjct: 384 VHVYDVSNGYETEQEIDFFGEISGISFSPDTEALFIGVWDRT 425
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/60 (36%), Positives = 33/60 (55%)
Frame = -3
Query: 506 VCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGR 327
+ G DD +DY T + +++ GH V V + P+ + +GSEDGTVR+W A R
Sbjct: 203 ITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYR 262
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = -3
Query: 539 SASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDG 360
SA + V G DD+ + Y+YNT +++ H + CV P S S+D
Sbjct: 62 SAKFVARKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDM 121
Query: 359 TVRLWQAVPGRA 324
++LW G A
Sbjct: 122 LIKLWDWEKGWA 133
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 46.0 bits (104), Expect = 3e-05
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 5/103 (4%)
Frame = -3
Query: 638 GAILTVAHGTNVSFYTSDTMRKLREFPVPTKCYS---ASLAPSRATFVCGGDDLKVYKYD 468
G +T + V + ++T + + +F +P K Y +S+A S G DD++V D
Sbjct: 117 GMFITGSFDHYVKVWDTNTSQVVVDFKMPGKVYRTAMSSMAMSHTLIAAGTDDVQVRLCD 176
Query: 467 YNTGTELESNRGHFGPVHCVRWSPDGE--LYASGSEDGTVRLW 345
+G + GH V V WS E LY G DG +R W
Sbjct: 177 IASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGC-DGAIRFW 218
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 45.6 bits (103), Expect = 4e-05
Identities = 36/144 (25%), Positives = 57/144 (39%), Gaps = 2/144 (1%)
Frame = -3
Query: 752 IVSVSDDNTMRVWDRXSGEEVQKVEFQSVPN-SXELSRDGAIL-TVAHGTNVSFYTSDTM 579
++S S D T+R+W + + + P + S G + +H ++ D +
Sbjct: 433 VLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRI 492
Query: 578 RKLREFPVPTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWS 399
+ LR + P+ G D V +D TG + GH V + S
Sbjct: 493 QPLRI--MAGHLSDVDWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMS 550
Query: 398 PDGELYASGSEDGTVRLWQAVPGR 327
PDG ASG EDGT+ +W R
Sbjct: 551 PDGRYMASGDEDGTIMMWDLSTAR 574
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/65 (32%), Positives = 33/65 (50%)
Frame = -3
Query: 539 SASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDG 360
S +++P G +D + +D +T + GH V + +S +G L ASGS D
Sbjct: 546 SLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADC 605
Query: 359 TVRLW 345
TV+LW
Sbjct: 606 TVKLW 610
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -3
Query: 434 GHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
GH GPV+ +SP G+ S S D T+RLW
Sbjct: 416 GHSGPVYSATFSPPGDFVLSSSADTTIRLW 445
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = -3
Query: 542 YSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSED 363
YSA+ +P + D + + L +GH PV ++SP G +AS S D
Sbjct: 422 YSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHD 481
Query: 362 GTVRLW 345
T R+W
Sbjct: 482 RTARIW 487
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 45.6 bits (103), Expect = 4e-05
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = -3
Query: 533 SLAPSRATFVCG-GDDLKVYKYDYNTGTE--LESNRGHFGPVHCVRWSP-DGELYASGSE 366
+ PS A C GDD + +D TGT ++ + H +HCV W+P D L +GS
Sbjct: 288 AFCPSSAQEFCSVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCVDWNPHDNNLILTGSA 347
Query: 365 DGTVRLW 345
D TVR++
Sbjct: 348 DNTVRVF 354
Score = 37.5 bits (83), Expect = 0.010
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -3
Query: 458 GTELESNRGHFGPVHCVRWSPD-GELYASGSEDGTVRLW 345
G+ + GH V CV+WSPD ++ S +EDG + +W
Sbjct: 365 GSPVYKFEGHRAAVLCVQWSPDKSSVFGSSAEDGLLNIW 403
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 45.2 bits (102), Expect = 5e-05
Identities = 21/75 (28%), Positives = 35/75 (46%)
Frame = -3
Query: 551 TKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASG 372
+ C S + P F G D + +D + + +GH V+ +R++PDG SG
Sbjct: 195 SNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSG 254
Query: 371 SEDGTVRLWQAVPGR 327
ED V++W G+
Sbjct: 255 GEDNVVKVWDLTAGK 269
Score = 35.9 bits (79), Expect = 0.029
Identities = 23/92 (25%), Positives = 36/92 (39%)
Frame = -3
Query: 620 AHGTNVSFYTSDTMRKLREFPVPTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTELES 441
A+ + F + R+ C SR V GG+D KV + + S
Sbjct: 89 AYKLRILFSLISSFREFVAHSAAVNCLKIGRKSSRV-LVTGGEDHKVNLWAIGKPNAILS 147
Query: 440 NRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
GH + V + L A+G+ GT++LW
Sbjct: 148 LYGHSSGIDSVTFDASEGLVAAGAASGTIKLW 179
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/65 (24%), Positives = 26/65 (40%)
Frame = -3
Query: 539 SASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDG 360
S + S G + +D + + GH V + P GE +ASGS D
Sbjct: 157 SVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDT 216
Query: 359 TVRLW 345
+++W
Sbjct: 217 NLKIW 221
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 45.2 bits (102), Expect = 5e-05
Identities = 31/105 (29%), Positives = 45/105 (42%), Gaps = 4/105 (3%)
Frame = -3
Query: 647 SRDGAILTVAHGTNVSFYTSDTMR-KLREFPVPTKCYSASLAPSRATFVCGGDDLKVYKY 471
+R I+T V+FY + KL AP + F+ D K Y
Sbjct: 155 TRPFRIVTCGEDFLVNFYEGPPFKFKLSSREHSNFVNCVRFAPDGSKFITVSSDKKGIIY 214
Query: 470 DYNTGT---ELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
D T EL S+ GH G ++ V WSPDG+ + S D + ++W
Sbjct: 215 DGKTCEILGELSSDDGHKGSIYAVSWSPDGKQVLTVSADKSAKIW 259
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -3
Query: 482 VYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQA 339
V D N ++ H P R+SP+GE ASG GTVR+W A
Sbjct: 38 VVTLDLNNPLKVSIYGEHAYPATVARYSPNGEWIASGDVSGTVRIWGA 85
Score = 34.7 bits (76), Expect = 0.068
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = -3
Query: 533 SLAPSRATFVCGGDDLKVYKYDYNTG--TELESNRGHFGPVHCVRWSPDGELYASGSEDG 360
++ P V GG D K++ Y N TE H G + +R+SPD ++AS +
Sbjct: 454 AVTPDGTEAVIGGQDGKLHLYSINGDSLTEEAVLERHRGAISVIRYSPDLSMFASADLNR 513
Query: 359 TVRLWQAV 336
+W V
Sbjct: 514 EAVVWDRV 521
Score = 31.1 bits (67), Expect = 0.84
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = -3
Query: 482 VYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVP 333
VY+ D + + H G V+ + ++ D + +SG ED +R+W P
Sbjct: 560 VYEVDKPASSRMTIKGAHLGGVYGLGFADDSHVVSSG-EDACIRVWSFTP 608
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -3
Query: 431 HFGPVHCVRWSPDGELYASGSEDGTVRLWQ 342
H ++C+ WSP+ + A+GS D V +++
Sbjct: 533 HSARINCLAWSPNSTMVATGSLDTCVIVYE 562
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/60 (36%), Positives = 33/60 (55%)
Frame = -3
Query: 506 VCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGR 327
+ G DD +DY T + +++ GH V V + P+ + +GSEDGTVR+W A R
Sbjct: 203 ITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYR 262
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Frame = -3
Query: 632 ILTVAHGTNVSFYTSDTMRKLREFPVPT-KCYSASLAPSRATFVCGGDDLKVYKYDYNTG 456
IL + V + T + F V SA P + V G DD+ + Y+YNT
Sbjct: 30 ILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNTM 89
Query: 455 TELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
+++ H + CV P S S+D ++LW
Sbjct: 90 DKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/60 (36%), Positives = 33/60 (55%)
Frame = -3
Query: 506 VCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGR 327
+ G DD +DY T + +++ GH V V + P+ + +GSEDGTVR+W A R
Sbjct: 203 ITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYR 262
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Frame = -3
Query: 632 ILTVAHGTNVSFYTSDTMRKLREFPVPT-KCYSASLAPSRATFVCGGDDLKVYKYDYNTG 456
IL + V + T + F V SA P + V G DD+ + Y+YNT
Sbjct: 30 ILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNTM 89
Query: 455 TELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
+++ H + CV P S S+D ++LW
Sbjct: 90 DKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/60 (36%), Positives = 33/60 (55%)
Frame = -3
Query: 506 VCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGR 327
+ G DD +DY T + +++ GH V V + P+ + +GSEDGTVR+W A R
Sbjct: 203 ITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYR 262
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Frame = -3
Query: 632 ILTVAHGTNVSFYTSDTMRKLREFPVPT-KCYSASLAPSRATFVCGGDDLKVYKYDYNTG 456
IL + V + T + F V SA P + V G DD+ + Y+YNT
Sbjct: 30 ILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNTM 89
Query: 455 TELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
+++ H + CV P S S+D ++LW
Sbjct: 90 DKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 44.8 bits (101), Expect = 6e-05
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 6/152 (3%)
Frame = -3
Query: 752 IVSVSDDNTMRVWDRXSGEEVQKVEFQSVPNSXELSRDGAILTVAHGTNVSFYTSDTMRK 573
+ + + D ++ ++D +K+ + NS + + A + S Y+ D RK
Sbjct: 209 LATSASDRSITIYDLRLSSAARKIIMMTKTNSIAWNPMEPMNLTAANEDGSCYSFDG-RK 267
Query: 572 LREFPVPTKCYSASL-----APSRATFVCGGDDLKVYKYDYNTGTELES-NRGHFGPVHC 411
L E K + +++ +P+ FV G D V + YN G E + V C
Sbjct: 268 LDEAKCVHKDHVSAVMDIDFSPTGREFVTGSYDRSVRIFPYNGGHSREIYHTKRMQRVFC 327
Query: 410 VRWSPDGELYASGSEDGTVRLWQAVPGRAYGL 315
V++S D SGS+D +RLW+A G+
Sbjct: 328 VKYSCDATYVISGSDDTNLRLWKAKASEQLGV 359
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -3
Query: 434 GHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
GH G V + S DG + S D TVRLW
Sbjct: 97 GHQGAVRGLTASTDGNVLVSCGTDCTVRLW 126
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 44.4 bits (100), Expect = 8e-05
Identities = 21/75 (28%), Positives = 34/75 (45%)
Frame = -3
Query: 551 TKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASG 372
+ C S P F G D + +D + + +GH V+ +R++PDG SG
Sbjct: 102 SNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSG 161
Query: 371 SEDGTVRLWQAVPGR 327
ED V++W G+
Sbjct: 162 GEDNIVKVWDLTAGK 176
Score = 35.9 bits (79), Expect = 0.029
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
Frame = -3
Query: 593 TSDTMRKLREF---PVPTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFG 423
T+ KL+EF C SR V GG+D KV + + S GH
Sbjct: 2 TTKRAYKLQEFVAHSAAVNCLKIGRKSSRV-LVTGGEDHKVNLWAIGKPNAILSLYGHSS 60
Query: 422 PVHCVRWSPDGELYASGSEDGTVRLW 345
+ V + L A+G+ GT++LW
Sbjct: 61 GIDSVTFDASEVLVAAGAASGTIKLW 86
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/65 (24%), Positives = 26/65 (40%)
Frame = -3
Query: 539 SASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDG 360
S + S G + +D + + GH V + P GE +ASGS D
Sbjct: 64 SVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDT 123
Query: 359 TVRLW 345
+++W
Sbjct: 124 NLKIW 128
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 44.4 bits (100), Expect = 8e-05
Identities = 21/75 (28%), Positives = 34/75 (45%)
Frame = -3
Query: 551 TKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASG 372
+ C S P F G D + +D + + +GH V+ +R++PDG SG
Sbjct: 102 SNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSG 161
Query: 371 SEDGTVRLWQAVPGR 327
ED V++W G+
Sbjct: 162 GEDNIVKVWDLTAGK 176
Score = 35.9 bits (79), Expect = 0.029
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
Frame = -3
Query: 593 TSDTMRKLREF---PVPTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFG 423
T+ KL+EF C SR V GG+D KV + + S GH
Sbjct: 2 TTKRAYKLQEFVAHSAAVNCLKIGRKSSRV-LVTGGEDHKVNLWAIGKPNAILSLYGHSS 60
Query: 422 PVHCVRWSPDGELYASGSEDGTVRLW 345
+ V + L A+G+ GT++LW
Sbjct: 61 GIDSVTFDASEVLVAAGAASGTIKLW 86
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/65 (24%), Positives = 26/65 (40%)
Frame = -3
Query: 539 SASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDG 360
S + S G + +D + + GH V + P GE +ASGS D
Sbjct: 64 SVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDT 123
Query: 359 TVRLW 345
+++W
Sbjct: 124 NLKIW 128
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 44.4 bits (100), Expect = 8e-05
Identities = 31/82 (37%), Positives = 37/82 (45%)
Frame = -3
Query: 590 SDTMRKLREFPVPTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHC 411
S + +L +P + S R F G DD V +D T L S GH V
Sbjct: 190 SKLLHQLEGHNMPVRSLVFSPVDPRVLF-SGSDDGHVNMHDAEGKTLLGSMSGHTSWVLS 248
Query: 410 VRWSPDGELYASGSEDGTVRLW 345
V SPDG A+GS D TVRLW
Sbjct: 249 VDASPDGGAIATGSSDRTVRLW 270
Score = 36.3 bits (80), Expect = 0.022
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 18/154 (11%)
Frame = -3
Query: 746 SVSDDNTMRVWDRXSGEEVQKVEFQ-SVPNSXELSRDGAILTVAHGTNVSFYTSDTM--R 576
S S D+ +RV+D + + +E S + G IL VA G++ S DT R
Sbjct: 77 SSSIDSFVRVFDVDTNATIAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVKLWDTASWR 136
Query: 575 KLREFPVP------------TKCYSASLA--PSRATFVCGGDDLKVYKYDYNTGTELESN 438
+ +P +K + S+A P+ CG D + +D + L
Sbjct: 137 LISTLSIPRPDAPKPSDKTSSKKFVLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQL 196
Query: 437 RGHFGPVHCVRWSP-DGELYASGSEDGTVRLWQA 339
GH PV + +SP D + SGS+DG V + A
Sbjct: 197 EGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHDA 230
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 44.4 bits (100), Expect = 8e-05
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = -3
Query: 533 SLAPSRATFVCG-GDDLKVYKYDYNTGTE--LESNRGHFGPVHCVRWSP-DGELYASGSE 366
+ +P+ A C GDD + +D TGT + + H +HCV W+P D L +GS
Sbjct: 299 AFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDWNPHDDNLILTGSA 358
Query: 365 DGTVRLW 345
D TVRL+
Sbjct: 359 DNTVRLF 365
Score = 37.9 bits (84), Expect = 0.007
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -3
Query: 458 GTELESNRGHFGPVHCVRWSPD-GELYASGSEDGTVRLW 345
G+ + GH V CV+WSPD ++ S +EDG + +W
Sbjct: 376 GSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIW 414
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 44.0 bits (99), Expect = 1e-04
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 7/163 (4%)
Frame = -3
Query: 752 IVSVSDDNTMRVWDRXSGEEVQKVEFQSVPNSXELSRDGAILTVAH-GTNVSFYTSDTMR 576
+VS + D T+++WD G V F S N+ LS DG + H N+ + T +
Sbjct: 331 VVSAAYDRTIKLWDLHKGYCTNTVLFTSNCNAICLSIDGLTVFSGHMDGNLRLWDIQTGK 390
Query: 575 KLREFPVPTKCY-SASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWS 399
L E + S SL+ + + G D +D T E+ G WS
Sbjct: 391 LLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRT-LEICGTLRASGNRLASNWS 449
Query: 398 -----PDGELYASGSEDGTVRLWQAVPGRAYGLWRRANETAPL 285
PD + A+GS DG+V +W G + + +T+P+
Sbjct: 450 RSCISPDDDYVAAGSADGSVHVWSLSKGNIVSILK--EQTSPI 490
Score = 32.3 bits (70), Expect = 0.36
Identities = 18/73 (24%), Positives = 31/73 (42%)
Frame = -3
Query: 545 CYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSE 366
C S + T GG D V +D N+GT ++S G G + + + D + + +
Sbjct: 234 CGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATS 293
Query: 365 DGTVRLWQAVPGR 327
+ +W GR
Sbjct: 294 SNNLFVWDVSSGR 306
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 GGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSP-DGELYASGSEDGTVRLW 345
G +D +VY ++ LE GH V+CV W+P + + AS S+D T+R+W
Sbjct: 461 GSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = -3
Query: 437 RGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGRAYGLWR 309
+GH G V + GE ASGS DG+VR+W+ GR +W+
Sbjct: 420 KGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQ 462
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = -3
Query: 524 PSRATFVCGGDDLKVYKYDY-NTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRL 348
P F+ + V +D N + +GH VH V WSP+GEL AS SED V+L
Sbjct: 642 PRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKL 700
Query: 347 WQAVPG 330
W G
Sbjct: 701 WSLSSG 706
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = -3
Query: 524 PSRATFVCGGDDLKVYKYDY-NTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRL 348
P F+ + V +D N + +GH VH V WSP+GEL AS SED V+L
Sbjct: 644 PRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKL 702
Query: 347 WQAVPG 330
W G
Sbjct: 703 WSLSSG 708
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = -3
Query: 524 PSRATFVCGGDDLKVYKYDY-NTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRL 348
P F+ + V +D N + +GH VH V WSP+GEL AS SED V+L
Sbjct: 644 PRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKL 702
Query: 347 WQAVPG 330
W G
Sbjct: 703 WSLSSG 708
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = -3
Query: 524 PSRATFVCGGDDLKVYKYDY-NTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRL 348
P F+ + V +D N + +GH VH V WSP+GEL AS SED V+L
Sbjct: 644 PRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKL 702
Query: 347 WQAVPG 330
W G
Sbjct: 703 WSLSSG 708
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = -3
Query: 524 PSRATFVCGGDDLKVYKYDY-NTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRL 348
P F+ + V +D N + +GH VH V WSP+GEL AS SED V+L
Sbjct: 644 PRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKL 702
Query: 347 WQAVPG 330
W G
Sbjct: 703 WSLSSG 708
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = -3
Query: 527 APSRATFVCGGDDLKVYKYDYNTGT---ELESNRGHFGPVHCVRWSPDGELYASGSEDGT 357
+P F+ D K YD TG EL S GH G ++ V WSPD + + S D +
Sbjct: 60 SPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSKRVLTVSADKS 119
Query: 356 VRLWQAVPGRAYG 318
++W+ G
Sbjct: 120 AKVWEVAEDGTIG 132
Score = 34.7 bits (76), Expect = 0.068
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = -3
Query: 539 SASLAPSRATFVCGGDD--LKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSE 366
S + +P+ G D + VY+ D + + + H G V+ V + D + +SG E
Sbjct: 404 SLAWSPNNKMVATGSIDTCVIVYEVDKPASSRITARNAHLGGVNAVAFIDDCTVASSG-E 462
Query: 365 DGTVRLWQAVP 333
D +VRLW P
Sbjct: 463 DASVRLWHIEP 473
Score = 34.3 bits (75), Expect = 0.090
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = -3
Query: 539 SASLAPSRATFVCG-GDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSED 363
S + P+R + G+D V YD S+R H V+C+R+SPDG + + S D
Sbjct: 13 SCAFKPTRPFRIATCGEDFLVNFYDGPPFKFHSSHREHSNFVNCIRYSPDGTKFITVSSD 72
Query: 362 GTVRLWQAVPGRAYG 318
++ G G
Sbjct: 73 KKGMIYDGKTGDKVG 87
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = -3
Query: 530 LAPSRATFVCGGDDLKVYKYDYNTGTELESN---RGHFGPVHCVRWSPDGELYASGSEDG 360
++P + GG D K++ Y + L+ H G + +R+SPD ++ASG +
Sbjct: 319 ISPDGKEAIVGGQDGKLHIYSVSGDNNLKEEAVLEKHRGALTVIRYSPDLTMFASGDANR 378
Query: 359 TVRLW 345
+W
Sbjct: 379 EAVVW 383
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = -3
Query: 536 ASLAPSRATFVCGGDD--LKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSED 363
AS P+ V G DD +K+++ + E+++ RGH V V + ++ S SED
Sbjct: 210 ASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSED 269
Query: 362 GTVRLWQAVPGRAYGLWRRANE 297
++R+W A +RR ++
Sbjct: 270 KSIRVWDATKRTGIQTFRREHD 291
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = -3
Query: 521 SRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
S+ FV GGDD K+ ++Y T L + GH + V++ + S S+D T+R+W
Sbjct: 62 SQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIW 120
Score = 34.3 bits (75), Expect = 0.090
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = -3
Query: 533 SLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTV 354
S P R + + +DY GT ++ H GPV V + L+ SG +D +
Sbjct: 16 SFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKI 75
Query: 353 RLW 345
++W
Sbjct: 76 KVW 78
Score = 32.7 bits (71), Expect = 0.27
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = -3
Query: 506 VCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
V DD + +++ + T + GH V C + P +L S S D TVR+W
Sbjct: 109 VSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 43.6 bits (98), Expect = 1e-04
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 5/103 (4%)
Frame = -3
Query: 638 GAILTVAHGTNVSFYTSDTMRKLREFPVPTKCYS---ASLAPSRATFVCGGDDLKVYKYD 468
G +T + + + ++T + + +F +P K Y +S+A S G +D++V D
Sbjct: 117 GLFITGSFDHYLKVWDTNTAQAVVDFKMPGKVYRTAMSSMAMSHTLIAAGTEDVQVRLCD 176
Query: 467 YNTGTELESNRGHFGPVHCVRWSPDGE--LYASGSEDGTVRLW 345
+G + GH V V WS E LY G DG +R W
Sbjct: 177 IASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGC-DGAIRFW 218
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -3
Query: 449 LESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGR 327
L+ H+G V ++ + DG S D +RLW GR
Sbjct: 305 LDRATAHYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGR 345
>At3g62770.2 68416.m07051 transport protein-related weak similarity
to Gsa12p [Pichia pastoris] GI:18307769; contains 1
WD-40 repeat (PF00400); putative proteins - different
species
Length = 432
Score = 43.2 bits (97), Expect = 2e-04
Identities = 32/136 (23%), Positives = 53/136 (38%), Gaps = 2/136 (1%)
Frame = -3
Query: 731 NTMRVWDRXSGEEVQKVEFQSVPNSXELSRDGAILTVAHGTNV-SFYTSDTMRKLREFPV 555
N + +WD G + ++ F+S S L RD I+ + V +F M ++
Sbjct: 146 NKVMIWDDHQGRCIGELSFRSDVRSVRLRRDRIIVVLEQKIFVYNFSDLKLMHQIETIAN 205
Query: 554 PTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYAS 375
P + S VC G + ++ + H + C + DG L A+
Sbjct: 206 PKGLCAVSQGVGSMVLVCPGLQKGQVRIEHYASKRTKFVMAHDSRIACFALTQDGHLLAT 265
Query: 374 GSEDGT-VRLWQAVPG 330
S GT VR++ V G
Sbjct: 266 ASSKGTLVRIFNTVDG 281
>At3g62770.1 68416.m07052 transport protein-related weak similarity
to Gsa12p [Pichia pastoris] GI:18307769; contains 1
WD-40 repeat (PF00400); putative proteins - different
species
Length = 307
Score = 43.2 bits (97), Expect = 2e-04
Identities = 32/136 (23%), Positives = 53/136 (38%), Gaps = 2/136 (1%)
Frame = -3
Query: 731 NTMRVWDRXSGEEVQKVEFQSVPNSXELSRDGAILTVAHGTNV-SFYTSDTMRKLREFPV 555
N + +WD G + ++ F+S S L RD I+ + V +F M ++
Sbjct: 146 NKVMIWDDHQGRCIGELSFRSDVRSVRLRRDRIIVVLEQKIFVYNFSDLKLMHQIETIAN 205
Query: 554 PTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYAS 375
P + S VC G + ++ + H + C + DG L A+
Sbjct: 206 PKGLCAVSQGVGSMVLVCPGLQKGQVRIEHYASKRTKFVMAHDSRIACFALTQDGHLLAT 265
Query: 374 GSEDGT-VRLWQAVPG 330
S GT VR++ V G
Sbjct: 266 ASSKGTLVRIFNTVDG 281
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = -3
Query: 503 CGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
CG D L +D TG + +GH PV V +SP+G ASG ED R+W
Sbjct: 399 CGLDSL-ARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIW 450
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -3
Query: 473 YDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGRA 324
+D NTG EL GH V+ + + DG L AS D R+W GR+
Sbjct: 366 WDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRS 415
Score = 30.7 bits (66), Expect = 1.1
Identities = 34/134 (25%), Positives = 50/134 (37%), Gaps = 4/134 (2%)
Frame = -3
Query: 734 DNTMRVWDRXSGEEVQKVEFQSVPN-SXELSRDGAILTVAHGTNVSFYTSDTMRK-LREF 561
D+ RVWD +G + + P S S +G L N MRK L
Sbjct: 402 DSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYII 461
Query: 560 PVPTKCYS-ASLAPSRATFVCGGD-DLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGE 387
P S P F+ D+KV + + ++S GH V + + D
Sbjct: 462 PAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSS 521
Query: 386 LYASGSEDGTVRLW 345
A+ S D T++LW
Sbjct: 522 CIATVSHDRTIKLW 535
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = -3
Query: 485 KVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPG 330
K++K D GT L++ GH + V + P G+ + S D T RLW G
Sbjct: 323 KLWKTD---GTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTG 371
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = -3
Query: 503 CGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
CGGD +VY +D +TG + RGH G V+ V+++ + S D ++R+W
Sbjct: 78 CGGDR-QVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVW 129
Score = 40.3 bits (90), Expect = 0.001
Identities = 38/155 (24%), Positives = 60/155 (38%), Gaps = 4/155 (2%)
Frame = -3
Query: 761 NSRIVSVSDDNTMRVWDRXSGEEVQKVEFQSVPNSXELSRDGAILTVAHGTNVSFYTSDT 582
N++ S D + WD +G ++K + D + + V+ G + S D
Sbjct: 72 NAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDC 131
Query: 581 MRKLREFPVP---TKCYSASLAPSRATFVCGGD-DLKVYKYDYNTGTELESNRGHFGPVH 414
E PV T + T + GG D V +D G E+ N G PV+
Sbjct: 132 RSHSVE-PVQIIDTFLDTVMSVVLTKTEIIGGSVDGTVRTFDMRIGREMSDNLGQ--PVN 188
Query: 413 CVRWSPDGELYASGSEDGTVRLWQAVPGRAYGLWR 309
C+ S DG +G D T+RL G +++
Sbjct: 189 CISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYK 223
Score = 39.5 bits (88), Expect = 0.002
Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 4/143 (2%)
Frame = -3
Query: 758 SRIVSVSDDNTMRVWDRXSGEEVQKVEFQSVPNSXELSRDG-AILTVAHGTNVSFYTSDT 582
+ I+ S D T+R +D G E+ Q V N +S DG +L + + T
Sbjct: 157 TEIIGGSVDGTVRTFDMRIGREMSDNLGQPV-NCISISNDGNCVLAGCLDSTLRLLDRTT 215
Query: 581 MRKLREFPVP-TKCYSAS--LAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHC 411
L+ + +K + L S A + G +D V+ +D L R H V
Sbjct: 216 GELLQVYKGHISKSFKTDCCLTNSDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTS 275
Query: 410 VRWSPDGELYASGSEDGTVRLWQ 342
V + P + + S DGT+R+W+
Sbjct: 276 VSYHPKEDCMLTSSVDGTIRVWK 298
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 437 RGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
+GH G V R++ DG + +D T+RLW
Sbjct: 15 KGHEGAVLAARFNGDGNYALTCGKDRTIRLW 45
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = -3
Query: 536 ASLAPSRATFVCGGDD--LKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSED 363
A+ P+ V G DD +K+++ + E+++ RGH V V + ++ S SED
Sbjct: 210 AAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSED 269
Query: 362 GTVRLWQAVPGRAYGLWRRANE 297
++R+W A +RR ++
Sbjct: 270 KSIRVWDATKRTGLQTFRREHD 291
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = -3
Query: 521 SRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
S+ FV GGDD K+ ++Y L + GH + V++ + S S+D T+R+W
Sbjct: 62 SQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
Score = 34.3 bits (75), Expect = 0.090
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = -3
Query: 533 SLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTV 354
S P R + + +DY GT ++ H GPV V + L+ SG +D +
Sbjct: 16 SFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKI 75
Query: 353 RLW 345
++W
Sbjct: 76 KVW 78
Score = 32.3 bits (70), Expect = 0.36
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = -3
Query: 506 VCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
V DD + +++ + T + GH V C + P +L S S D TVR+W
Sbjct: 109 VSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 41.9 bits (94), Expect = 4e-04
Identities = 37/142 (26%), Positives = 60/142 (42%), Gaps = 5/142 (3%)
Frame = -3
Query: 749 VSVSDDNTMRVWDRXSGEEVQKVEFQSVPNSXELSRDGAILTVAHGTNVS--FYTSDTM- 579
++V+ T+ ++ S ++ F+ V +S DGA+ + V F + M
Sbjct: 68 LAVAHSATVSLFSSQSLSSSRRFSFRDVVSSVCFRSDGALFAACDLSGVVQVFDIKERMA 127
Query: 578 -RKLREFPVPTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRW 402
R LR P + + + V GGDD V +D T + GH V C
Sbjct: 128 LRTLRSHSAPARFVKYPVQ-DKLHLVSGGDDGVVKYWDVAGATVISDLLGHKDYVRCGDC 186
Query: 401 SP-DGELYASGSEDGTVRLWQA 339
SP + + +GS D TV++W A
Sbjct: 187 SPVNDSMLVTGSYDHTVKVWDA 208
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = -3
Query: 758 SRIVSVSDDNTMRVWDRXSGEEVQKVEFQSVPNSXELSRDGAILTVAHGTNVSF 597
SR+VSV+ D M+V+D + + F + S LS DG+ + + F
Sbjct: 280 SRLVSVALDGYMKVFDYGRAKVTYSMRFPAPLMSLGLSPDGSTRVIGGSNGMVF 333
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 41.9 bits (94), Expect = 4e-04
Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 18/157 (11%)
Frame = -3
Query: 761 NSRIVSVSDDNTMRVWDRXSGEEVQKVEFQSVPNSXELSRDG--AILTVAH------GTN 606
+SR+++ S D T ++WD SG+E+ +F + S + + A++T H +
Sbjct: 64 SSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRTAAIH 123
Query: 605 VSFYTSDTMRKLREFPVPTKC-------YSASLAPSRATFVCGGDDLKVYKYDYNTGTEL 447
V D + E + C A P T V GG+D + +D TG L
Sbjct: 124 VKRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLL 183
Query: 446 ESNR---GHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
+ + GH + + + D + +GS D T +LW
Sbjct: 184 KQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLW 220
Score = 36.3 bits (80), Expect = 0.022
Identities = 21/61 (34%), Positives = 26/61 (42%)
Frame = -3
Query: 509 FVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPG 330
F C D + N G L + RGH G V C S D +GS D T +LW G
Sbjct: 26 FSCAKDHTPTLWFADN-GERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSG 84
Query: 329 R 327
+
Sbjct: 85 K 85
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -3
Query: 437 RGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGRAYGLWRRAN 300
+GH P+ +R++ +G+L S ++D T LW A G G +R N
Sbjct: 7 KGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHN 52
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 404 WSPDGELYASGSEDGTVRLWQAVPGR 327
W P + SG ED +R+W A G+
Sbjct: 156 WGPLNQTIVSGGEDKVIRIWDAETGK 181
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/96 (22%), Positives = 38/96 (39%)
Frame = -3
Query: 632 ILTVAHGTNVSFYTSDTMRKLREFPVPTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGT 453
++T + V + + L F + S +P GD + D +G
Sbjct: 251 VMTANNDCTVRLFDATNFALLNRFAFHWSVNNISTSPDGKLVAVLGDSPECLLADTGSGK 310
Query: 452 ELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
+ GH W P+G++ A+G++D T RLW
Sbjct: 311 VIHGLEGHLDYSFSSAWHPNGQILATGNQDTTCRLW 346
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 41.5 bits (93), Expect = 6e-04
Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 5/144 (3%)
Frame = -3
Query: 761 NSRIVSVSDDNTMRVWDRXSGEEVQKV---EFQSVPNSXELSRDGAILTVA-HGTNVSFY 594
++ +++++ +T+ +WD SG + V E + S ++DG L V + V +
Sbjct: 133 SANVLAIALGDTVYLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLW 192
Query: 593 TSDTMRKLREFPVPTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNR-GHFGPV 417
+ R++R + SLA + GG D K+ D + + GH V
Sbjct: 193 DFVSNRQVRTLIGGHESRVGSLAWNNHILTTGGMDGKIVNNDVRIRSSIVGTYLGHTEEV 252
Query: 416 HCVRWSPDGELYASGSEDGTVRLW 345
++WS G+ ASG V +W
Sbjct: 253 CGLKWSESGKKLASGGNYNVVHIW 276
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = -3
Query: 482 VYKYDYNTGT--ELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGR 327
VY +D ++G+ EL + GPV + W+ DG A G ++ V+LW V R
Sbjct: 145 VYLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDFVSNR 198
>At5g05150.1 68418.m00547 transport protein-related contains 2 WD-40
repeats (PF00400); similar to transport protein Gsa12p
(GI:18307769) [Pichia pastoris]
Length = 374
Score = 41.5 bits (93), Expect = 6e-04
Identities = 37/158 (23%), Positives = 71/158 (44%), Gaps = 7/158 (4%)
Frame = -3
Query: 731 NTMRVWDRXSGEEVQKVEFQSVPNSXELSRDGAILTVAHGTNVSFYTSDTM---RKLREF 561
N + VWD + ++ F+S + +L+R+ ++ + N+ YT + + R +
Sbjct: 102 NKVFVWDDYRNCCLSELTFKSEVIAVKLAREHVVVVLKQ--NIYVYTFNNLKVDRVIETL 159
Query: 560 PVPTKCYSASLAPSRATFVCGG---DDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDG 390
P + S+A C G ++V+ +N ++ + H + C+ + DG
Sbjct: 160 MNPKGLCCVTHVESKAVLACPGFHPGQVQVHDLRWNV---IKFIKAHDSAIACMTLTLDG 216
Query: 389 ELYASGSEDGT-VRLWQAVPGRAYGLWRRANETAPLAN 279
L A+ S GT +R++ AV G +RR E A + N
Sbjct: 217 SLLATASTKGTLIRIFNAVDGTLLQEFRRGVERAEIYN 254
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = -3
Query: 536 ASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGT 357
+SL+P GDD D + G + + +GH W P+G +A+G++D T
Sbjct: 283 SSLSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKT 342
Query: 356 VRLW 345
R+W
Sbjct: 343 CRIW 346
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = -3
Query: 536 ASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGT 357
+SL+P GDD D + G + + +GH W P+G +A+G++D T
Sbjct: 277 SSLSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKT 336
Query: 356 VRLW 345
R+W
Sbjct: 337 CRIW 340
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 41.1 bits (92), Expect = 8e-04
Identities = 34/145 (23%), Positives = 60/145 (41%), Gaps = 6/145 (4%)
Frame = -3
Query: 761 NSRIVSVSDDNTMRVWDRXSGEEVQKVEFQSVPNSXELSRDGAILTVAHGTNVSFYTSDT 582
+ ++ SVS D T+RVWD SG+ V + + S L +G + + + + T
Sbjct: 143 SDKLFSVSIDGTLRVWDCNSGQCVHSINLDAEAGS--LISEGPWVFLGLPNAIKAFNVQT 200
Query: 581 MRKLREFPVPTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTE------LESNRGHFGP 420
+ L ++ + G + + T +E L S GH G
Sbjct: 201 SQDLHLQAAGVVGQVNAMTIANGMLFAGTSSGSILVWKATTDSESDPFKYLTSLEGHSGE 260
Query: 419 VHCVRWSPDGELYASGSEDGTVRLW 345
V C ++ G++ SGS D T+++W
Sbjct: 261 VTC--FAVGGQMLYSGSVDKTIKMW 283
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/36 (52%), Positives = 21/36 (58%)
Frame = -3
Query: 434 GHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGR 327
GH G V V SPDG L ASG +DG V LW G+
Sbjct: 192 GHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGK 227
Score = 32.7 bits (71), Expect = 0.27
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = -3
Query: 485 KVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPG 330
K+ K D G GH V V S DG+ SGS DG +RLW G
Sbjct: 44 KLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAG 95
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = -3
Query: 419 VHC--VRWSPDGELYASGSEDGTVRLW 345
++C + WS DG SG DG +R+W
Sbjct: 296 IYCTSLNWSADGSTLFSGYTDGVIRVW 322
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = -3
Query: 500 GGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAV 336
G D ++ +D G GH V V +S D S S D T++LW +
Sbjct: 81 GSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTL 135
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = -3
Query: 446 ESNRGHFGPVHCVRWSPD--GELYASGSEDGTVRLW 345
E GH V CVR+SP+ S S D TV++W
Sbjct: 144 EGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVW 179
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = -3
Query: 539 SASLAPSRAT-FVCGGDDLKVYKYDYNTGTE-LESNRGHFGPVHCVRWSPDGELYASGSE 366
S S++ S F+ G D +D + + + GH G V+ V++ PDG + +GS+
Sbjct: 209 SVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSD 268
Query: 365 DGTVRLWQAVPG 330
DGT RL+ G
Sbjct: 269 DGTCRLYDIRTG 280
Score = 33.9 bits (74), Expect = 0.12
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -3
Query: 437 RGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAV 336
+GH G V+ + W+P+ S S+DG + +W A+
Sbjct: 62 QGHTGKVYSLDWTPERNRIVSASQDGRLIVWNAL 95
Score = 32.7 bits (71), Expect = 0.27
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 9/80 (11%)
Frame = -3
Query: 524 PSRATFVCGGDDLKVYKYDYNTGTELE----SNRGHFGPVHCVRWSPDGE-LYASGSEDG 360
P F G DD YD TG +L+ G GPV + +S G L+A + +
Sbjct: 258 PDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNN 317
Query: 359 TVRLWQAVPG----RAYGLW 312
T +W + G R Y +W
Sbjct: 318 TCYVWDTLLGEFSCRLYWIW 337
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = -3
Query: 539 SASLAPSRAT-FVCGGDDLKVYKYDYNTGTE-LESNRGHFGPVHCVRWSPDGELYASGSE 366
S S++ S F+ G D +D + + + GH G V+ V++ PDG + +GS+
Sbjct: 147 SVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSD 206
Query: 365 DGTVRLWQAVPG 330
DGT RL+ G
Sbjct: 207 DGTCRLYDIRTG 218
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Frame = -3
Query: 524 PSRATFVCGGDDLKVYKYDYNTGTELE----SNRGHFGPVHCVRWSPDGE-LYASGSEDG 360
P F G DD YD TG +L+ G GPV + +S G L+A + +
Sbjct: 196 PDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNN 255
Query: 359 TVRLWQAVPG 330
T +W + G
Sbjct: 256 TCYVWDTLLG 265
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = -3
Query: 539 SASLAPSRAT-FVCGGDDLKVYKYDYNTGTE-LESNRGHFGPVHCVRWSPDGELYASGSE 366
S S++ S F+ G D +D + + + GH G V+ V++ PDG + +GS+
Sbjct: 209 SVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSD 268
Query: 365 DGTVRLWQAVPG 330
DGT RL+ G
Sbjct: 269 DGTCRLYDIRTG 280
Score = 33.9 bits (74), Expect = 0.12
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -3
Query: 437 RGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAV 336
+GH G V+ + W+P+ S S+DG + +W A+
Sbjct: 62 QGHTGKVYSLDWTPERNRIVSASQDGRLIVWNAL 95
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Frame = -3
Query: 524 PSRATFVCGGDDLKVYKYDYNTGTELE----SNRGHFGPVHCVRWSPDGE-LYASGSEDG 360
P F G DD YD TG +L+ G GPV + +S G L+A + +
Sbjct: 258 PDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNN 317
Query: 359 TVRLWQAVPG 330
T +W + G
Sbjct: 318 TCYVWDTLLG 327
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 40.3 bits (90), Expect = 0.001
Identities = 37/148 (25%), Positives = 62/148 (41%), Gaps = 7/148 (4%)
Frame = -3
Query: 752 IVSVSDDNTMRVWDRXSGEEVQKV---EFQSVPNSXELSRDGAIL---TVAHGTNV-SFY 594
+ S S D ++ V D S + Q S LS D +L ++ H + F
Sbjct: 33 VTSSSSDPSISVHDGLSTSTLPPTILRHHQDGVTSLALSNDSTLLASGSIDHCVKLYKFP 92
Query: 593 TSDTMRKLREFPVPTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVH 414
+ + + F +P + + + S + GDD + + G+ + +GH GPV
Sbjct: 93 SGEFQTNITRFTLPIRVLAFN--GSGSLLAAAGDDEGIKLINTFDGSIVRVLKGHKGPVT 150
Query: 413 CVRWSPDGELYASGSEDGTVRLWQAVPG 330
+ + P+GEL AS GTV W+ G
Sbjct: 151 GLDFHPNGELLASIDTTGTVLCWELQNG 178
Score = 33.5 bits (73), Expect = 0.16
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -3
Query: 527 APSRATFVCGGDDLKVYKYDYNTGTELESNRG-HFGPVHCVRWSPDGELYASGSEDGTVR 351
+P T G V YD TG +L + RG H + + W+P+G+ A+ D V
Sbjct: 204 SPDGRTLAVPGLRNDVVMYDRFTGEKLFALRGDHLEAICYLTWAPNGKYIATSGLDKQVL 263
Query: 350 LW 345
LW
Sbjct: 264 LW 265
Score = 29.9 bits (64), Expect = 1.9
Identities = 26/116 (22%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Frame = -3
Query: 671 SVPNSXELSRDGAILTVAHGTN--VSF--YTSDTMRKLREFPVPTKCYSASLAPSRATFV 504
S+ N S DG L V N V + +T + + LR + CY + AP+
Sbjct: 196 SIVNIPRWSPDGRTLAVPGLRNDVVMYDRFTGEKLFALRGDHLEAICY-LTWAPNGKYIA 254
Query: 503 CGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAV 336
G D +V +D + +++ ++ + C+ W P+G + G +W+++
Sbjct: 255 TSGLDKQVLLWDVDKKQDIDRHKFE-ERICCMSWKPNGNALSVIDAKGRYGVWESL 309
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = -3
Query: 434 GHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGR 327
GH G ++ V SPDG L ASG +DG + LW G+
Sbjct: 191 GHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGK 226
Score = 34.3 bits (75), Expect = 0.090
Identities = 38/157 (24%), Positives = 64/157 (40%), Gaps = 21/157 (13%)
Frame = -3
Query: 752 IVSVSDDNTMRVWDRXSGE-EVQKVEFQSVPNSXELSRDGAILTVAHGTNVSF-YTSDTM 579
IVS S D T++VW+ + + V N+ +S DG++ V +
Sbjct: 166 IVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEG 225
Query: 578 RKLREFPVPTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGT-----------ELESNRG 432
+KL + +S +P+R ++C + + +D + + E E N G
Sbjct: 226 KKLYSLEAGSIIHSLCFSPNRY-WLCAATENSIRIWDLESKSVVEDLKVDLKSEAEKNEG 284
Query: 431 HFGP------VHC--VRWSPDGELYASGSEDGTVRLW 345
G ++C + WS DG SG DG VR+W
Sbjct: 285 GVGTGNQKKVIYCTSLNWSADGSTLFSGYTDGVVRVW 321
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/52 (38%), Positives = 24/52 (46%)
Frame = -3
Query: 485 KVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPG 330
K+ K D + G GH V V S DG+ SGS DG +RLW G
Sbjct: 44 KLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATG 95
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -3
Query: 500 GGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAV 336
G D ++ +D TG GH V V +S D S S D T++LW +
Sbjct: 81 GSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTL 135
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = -3
Query: 446 ESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPG 330
ES H PV C+ +S D E+ ASGS+DG +++W+ G
Sbjct: 257 ESFMMHDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTG 295
Score = 37.5 bits (83), Expect = 0.010
Identities = 35/151 (23%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Frame = -3
Query: 758 SRIVSVSDDNTMRVWDRXSGEEVQKVE-------FQSVPNSXEL-SRDGAILTVAHGTNV 603
SRI++ S D T++VWD + + +Q + + NS L ++ + V + T+
Sbjct: 360 SRIITASSDCTVKVWDSKTTDCLQTFKPPPPLRGTDASVNSIHLFPKNTEHIVVCNKTSS 419
Query: 602 SFYTSDTMRKLREFPVPTK---CYSASLAPSRATFV-CGGDDLKVYKYDYNTGTELESNR 435
+ + + ++ F + + A+ ++ ++ C G+D K+Y ++Y +G
Sbjct: 420 IYIMTLQGQVVKSFSSGNREGGDFVAACVSTKGDWIYCIGEDKKLYCFNYQSGGLEHFMM 479
Query: 434 GHFGPVHCVRWSPDGELYASGSEDGTVRLWQ 342
H V + P L A+ SED T++LW+
Sbjct: 480 VHEKDVIGITHHPHRNLLATYSEDCTMKLWK 510
Score = 37.1 bits (82), Expect = 0.013
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 413 CVRWSPDGELYASGSEDGTVRLWQAVPGR 327
C R+SPDG+ AS S DG + +W + G+
Sbjct: 218 CARFSPDGQFLASSSVDGFIEVWDYISGK 246
Score = 32.3 bits (70), Expect = 0.36
Identities = 32/149 (21%), Positives = 62/149 (41%), Gaps = 11/149 (7%)
Frame = -3
Query: 752 IVSVSDDNTMRVWDRXSGEEVQKVEFQSVPN---------SXELSRDGAILTV-AHGTNV 603
+ S S D + VWD SG+ + +++Q+ + + SRD +L + +
Sbjct: 228 LASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLASGSQDGKI 287
Query: 602 SFYTSDTMRKLREFPVPTK-CYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHF 426
+ T +R F ++ S S + + + D + +G L+ RGH
Sbjct: 288 KIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEFRGHT 347
Query: 425 GPVHCVRWSPDGELYASGSEDGTVRLWQA 339
V+ ++ DG + S D TV++W +
Sbjct: 348 SYVNHAIFTSDGSRIITASSDCTVKVWDS 376
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = -3
Query: 575 KLREF---PVPTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVR 405
KL+EF C S SR F+ GGDD KV + T L S GH V V
Sbjct: 7 KLQEFLAHSANVNCLSIGKKTSRL-FITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVA 65
Query: 404 WSPDGELYASGSEDGTVRLW 345
+ L +G+ G ++LW
Sbjct: 66 FDSAEVLVLAGASSGVIKLW 85
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/75 (22%), Positives = 32/75 (42%)
Frame = -3
Query: 551 TKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASG 372
+ C + P G D + +D +++ +GH + +R++PDG SG
Sbjct: 101 SNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSG 160
Query: 371 SEDGTVRLWQAVPGR 327
D V++W G+
Sbjct: 161 GLDNVVKVWDLTAGK 175
Score = 37.1 bits (82), Expect = 0.013
Identities = 21/60 (35%), Positives = 28/60 (46%)
Frame = -3
Query: 524 PSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
P V GG D V +D G L + H GP+ + + P L A+GS D TV+ W
Sbjct: 152 PDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFW 211
Score = 37.1 bits (82), Expect = 0.013
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Frame = -3
Query: 752 IVSVSDDNTMRVWDRXSGEEVQKVEFQSVP-NSXEL-SRDGAILTVAHGTNVSFYTSDTM 579
+VS DN ++VWD +G+ + + +F P S + + + T + V F+ +T
Sbjct: 157 VVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETF 216
Query: 578 RKLREF-PVPTKCYSASLAPSRATFVCGGDD-LKVYKYD 468
+ P T S P T CG DD LKVY ++
Sbjct: 217 ELIGSTRPEATGVRSIKFHPDGRTLFCGLDDSLKVYSWE 255
Score = 31.5 bits (68), Expect = 0.63
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = -3
Query: 521 SRATFVCGGDDLKVYK-YDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
S V G V K +D + + GH V + P GE ASGS D +++W
Sbjct: 68 SAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIW 127
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 40.3 bits (90), Expect = 0.001
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = -3
Query: 434 GHFGPVHCVRWSPDGELYASGSEDGTVRLWQ 342
GH G + +++SPDG+ A+G EDG V++W+
Sbjct: 196 GHKGKIWTLKFSPDGKYLATGGEDGVVKIWR 226
Score = 32.7 bits (71), Expect = 0.27
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = -3
Query: 455 TELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQ 342
T + GH G V + WS D L S S+D TVRLW+
Sbjct: 263 TPFQELYGHTGDVLDLAWS-DSNLLLSASKDKTVRLWR 299
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = -3
Query: 434 GHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGR 327
GH G ++ V SPDG L ASG +DG + LW G+
Sbjct: 191 GHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGK 226
Score = 35.1 bits (77), Expect = 0.051
Identities = 20/54 (37%), Positives = 25/54 (46%)
Frame = -3
Query: 485 KVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGRA 324
K+ K D + G GH V V S DG+ SGS DG +RLW G +
Sbjct: 44 KLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGES 97
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -3
Query: 500 GGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAV 336
G D ++ +D TG GH V V +S D S S D T++LW +
Sbjct: 81 GSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTL 135
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = -3
Query: 419 VHC--VRWSPDGELYASGSEDGTVRLW 345
++C + WS DG SG DG +R+W
Sbjct: 295 IYCTSLNWSADGNTLFSGYTDGVIRVW 321
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 39.9 bits (89), Expect = 0.002
Identities = 37/140 (26%), Positives = 56/140 (40%), Gaps = 4/140 (2%)
Frame = -3
Query: 752 IVSVSDDNTMRVWDRXSGEEVQKVEFQSVPNSXELSRDGAILTVAHGTNVSFYTSDTMRK 573
+ + S D ++R+WD SG+ Q+VE + DG VA G T +RK
Sbjct: 82 VATASGDKSVRLWDARSGKCTQQVELSGENINITYKPDGT--HVAVGNRDDELTILDVRK 139
Query: 572 LREFPVPTKCYSAS-LA---PSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVR 405
+ Y + +A P F+ G V Y + L++ H +C+
Sbjct: 140 FKPLHRRKFNYEVNEIAWNMPGDFFFLTTGLGT-VEVLSYPSLKPLDTLTAHTAGCYCIA 198
Query: 404 WSPDGELYASGSEDGTVRLW 345
P G +A GS D V LW
Sbjct: 199 IDPKGRYFAVGSADSLVSLW 218
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -3
Query: 437 RGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVP 333
+GH VH V W+ +G ASGS D T R+W P
Sbjct: 17 QGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEP 51
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 437 RGHFGPVHCVRWSPD-GELYASGSEDGTVRLWQAVPGR 327
+GH V + W P +L A+ S D +VRLW A G+
Sbjct: 63 KGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDARSGK 100
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
Frame = -3
Query: 641 DGAILTVAHGTNVSFYTSDTMRKLREFPVPT-KCYSASLAPSRATFVCGGDDLKVYKYDY 465
D + + H + + +T++ +R + + S G D KV +D
Sbjct: 72 DKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDV 131
Query: 464 NTGTELESNRGHFGPVHCVRWSPDG--ELYASGSEDGTVRLW 345
+ G RGH G V + + PD + SGS+D TVR+W
Sbjct: 132 DGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVW 173
Score = 33.1 bits (72), Expect = 0.21
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 2/109 (1%)
Frame = -3
Query: 650 LSRDGAILTVAHGT--NVSFYTSDTMRKLREFPVPTKCYSASLAPSRATFVCGGDDLKVY 477
+S DG+ + A G N+ T +++ E T + +L+P G ++
Sbjct: 27 VSSDGSFIACACGDVINIVDSTDSSVKSTIEGESDTLT-ALALSPDDKLLFSAGHSRQIR 85
Query: 476 KYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPG 330
+D T + S +GH GPV + G L A+ D V +W G
Sbjct: 86 VWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGG 134
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 4/58 (6%)
Frame = -3
Query: 506 VCGGDDLKVYKYDYNT-GTE---LESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
+ G DD V +D N TE L HF V + S DG S D V LW
Sbjct: 162 ISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLW 219
Score = 28.3 bits (60), Expect = 5.9
Identities = 38/144 (26%), Positives = 53/144 (36%), Gaps = 11/144 (7%)
Frame = -3
Query: 752 IVSVSDDNTMRVWDRXSGEEVQKV-----EFQSVPNSXELSRDGAILTVAHGTNV----S 600
++S SDD T+RVWD + +K + S S LS DG L A V
Sbjct: 161 LISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWD 220
Query: 599 FYTSDTMRKLREFPVPTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGP 420
+ + + V + S A+FV D K K + ++ G G
Sbjct: 221 LHDYSCKATVATYEVLEAVTTVSSGTPFASFVASLDQKKSKKKESDSQATYFITVGERGV 280
Query: 419 VHCVRWSPDGE--LYASGSEDGTV 354
V W +G LY S D TV
Sbjct: 281 VRI--WKSEGSICLYEQKSSDITV 302
Score = 28.3 bits (60), Expect = 5.9
Identities = 35/151 (23%), Positives = 55/151 (36%), Gaps = 13/151 (8%)
Frame = -3
Query: 758 SRIVSVSDDNTMRVWDRXSGEEVQKVEFQSVPNSXELSRDGAILTVAHGTNVSFY---TS 588
S VS S D T++VW E + S + D I +VA N S +
Sbjct: 460 SFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSE 519
Query: 587 DTMRKLREFP----VPT------KCYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESN 438
D + P V T + +S + + D V + + G+ L++
Sbjct: 520 DRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTF 579
Query: 437 RGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
GH V + DG + S DG ++LW
Sbjct: 580 EGHTSSVLRASFITDGTQFVSCGADGLLKLW 610
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = -3
Query: 449 LESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQ 342
LE+ GH PV C+ SPD +GS D TV LW+
Sbjct: 2661 LETAFGHCAPVTCLALSPDNNFLVTGSRDSTVLLWR 2696
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 39.5 bits (88), Expect = 0.002
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Frame = -3
Query: 599 FYTSDTMRKLREFPVPTKCYSASLAPSRATFVCGGDDLKVYKYDYNT-GTELESN---RG 432
F + R + F S S PS + G D + YD NT L SN G
Sbjct: 113 FSKTTAKRAFKVFQDTHNVRSISFHPSGEFLLAGTDHPIPHLYDVNTYQCFLPSNFPDSG 172
Query: 431 HFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGR 327
G ++ VR+S G +Y + S+DG +RL+ V +
Sbjct: 173 VSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAK 207
Score = 33.5 bits (73), Expect = 0.16
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -3
Query: 431 HFGPVHCVRWSPDGELYASGSEDGTVRLWQ 342
H V C R+SPDG +A+G D +++L++
Sbjct: 30 HKSVVRCARFSPDGMFFATGGADTSIKLFE 59
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 39.5 bits (88), Expect = 0.002
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Frame = -3
Query: 599 FYTSDTMRKLREFPVPTKCYSASLAPSRATFVCGGDDLKVYKYDYNT-GTELESN---RG 432
F + R + F S S PS + G D + YD NT L SN G
Sbjct: 205 FSKTTAKRAFKVFQDTHNVRSISFHPSGEFLLAGTDHPIPHLYDVNTYQCFLPSNFPDSG 264
Query: 431 HFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGR 327
G ++ VR+S G +Y + S+DG +RL+ V +
Sbjct: 265 VSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAK 299
Score = 33.5 bits (73), Expect = 0.16
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -3
Query: 431 HFGPVHCVRWSPDGELYASGSEDGTVRLWQ 342
H V C R+SPDG +A+G D +++L++
Sbjct: 122 HKSVVRCARFSPDGMFFATGGADTSIKLFE 151
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/95 (27%), Positives = 42/95 (44%)
Frame = -3
Query: 626 TVAHGTNVSFYTSDTMRKLREFPVPTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTEL 447
T+A + +T + L + P C S + S+ GG D +D +G L
Sbjct: 199 TLASIDTLERFTQLSSHPLHKTNKPGIC-SMDILHSKDVIATGGVDATAVLFDRPSGQIL 257
Query: 446 ESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQ 342
+ GH V V++ D +L + S D TVR+W+
Sbjct: 258 STLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWR 292
Score = 31.5 bits (68), Expect = 0.63
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = -3
Query: 539 SASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDG 360
+A+ P G V +D + + GH G V + +S +G A+ +EDG
Sbjct: 358 AAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDG 417
Query: 359 TVRLW 345
VRLW
Sbjct: 418 -VRLW 421
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/95 (27%), Positives = 42/95 (44%)
Frame = -3
Query: 626 TVAHGTNVSFYTSDTMRKLREFPVPTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTEL 447
T+A + +T + L + P C S + S+ GG D +D +G L
Sbjct: 199 TLASIDTLERFTQLSSHPLHKTNKPGIC-SMDILHSKDVIATGGVDATAVLFDRPSGQIL 257
Query: 446 ESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQ 342
+ GH V V++ D +L + S D TVR+W+
Sbjct: 258 STLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWR 292
Score = 31.5 bits (68), Expect = 0.63
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = -3
Query: 539 SASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDG 360
+A+ P G V +D + + GH G V + +S +G A+ +EDG
Sbjct: 358 AAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDG 417
Query: 359 TVRLW 345
VRLW
Sbjct: 418 -VRLW 421
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/108 (20%), Positives = 43/108 (39%), Gaps = 1/108 (0%)
Frame = -3
Query: 647 SRDGAILTVAHGTNVSFYTSDTMRKLREFPVP-TKCYSASLAPSRATFVCGGDDLKVYKY 471
S + +L A + + + + +R F + C + P G D + +
Sbjct: 17 SEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVW 76
Query: 470 DYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGR 327
D +++ +GH + + +SPDG SG D V++W G+
Sbjct: 77 DTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGK 124
Score = 38.7 bits (86), Expect = 0.004
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 4/140 (2%)
Frame = -3
Query: 752 IVSVSDDNTMRVWDRXSGEEVQKVE-FQSVPNSXELSRDGAILTVAHGTNVSFYTSDTMR 576
+++ + +++WD + V+ +S ++ E G L + ++ + DT +
Sbjct: 22 VLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLA-SGSSDTNLRVWDTRK 80
Query: 575 K--LREFPVPTKCYSA-SLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVR 405
K ++ + T+ S +P V GG D V +D G L + H GP+ +
Sbjct: 81 KGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLD 140
Query: 404 WSPDGELYASGSEDGTVRLW 345
+ P L A+GS D TV+ W
Sbjct: 141 FHPLEFLLATGSADRTVKFW 160
Score = 33.1 bits (72), Expect = 0.21
Identities = 37/143 (25%), Positives = 53/143 (37%), Gaps = 4/143 (2%)
Frame = -3
Query: 752 IVSVSDDNTMRVWDRXSGEEVQKVEFQSVP-NSXELSRDGAILTVAHGTNVSFYTSDTMR 576
+ S S D +RVWD +Q + + ++ E S DG + NV T
Sbjct: 64 LASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAG 123
Query: 575 KL-REFPVPT-KCYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRW 402
KL EF S P G D V +D T + + R V + +
Sbjct: 124 KLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAF 183
Query: 401 SPDGELYASGSEDG-TVRLWQAV 336
PDG+ G +DG V W+ V
Sbjct: 184 HPDGQTLFCGLDDGLKVYSWEPV 206
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -3
Query: 434 GHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
GH PV V ++ + L +G+ G ++LW
Sbjct: 5 GHTSPVDSVAFNSEEVLVLAGASSGVIKLW 34
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 38.7 bits (86), Expect = 0.004
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 4/141 (2%)
Frame = -3
Query: 755 RIVSVSDDNTMRVWDRXS-GEEVQK-VEFQSVPNSXELS--RDGAILTVAHGTNVSFYTS 588
R+ + S D T+RVWD + G ++ + S+ S + +D I + + + +++
Sbjct: 707 RLATSSFDKTVRVWDADNKGYSLRTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSI 766
Query: 587 DTMRKLREFPVPTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCV 408
+ R + + P ++ V D T S +GH P++ V
Sbjct: 767 NNGSCTRVYKGGST--QIRFQPRVGKYLAASSANLVNVLDVETQAIRHSLQGHANPINSV 824
Query: 407 RWSPDGELYASGSEDGTVRLW 345
W P G+ AS SED V++W
Sbjct: 825 CWDPSGDFLASVSED-MVKVW 844
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -3
Query: 461 TGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
T TE+ S R V C +S DG++ AS D LW
Sbjct: 640 TFTEVNSVRASTTKVTCCHFSSDGKMLASAGHDKKAVLW 678
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = -3
Query: 449 LESNRGHFGPVHCVRWSPD--GELYASGSEDGTVRLWQ 342
L+ N+ H V+ V+WSP L AS S+DG V++WQ
Sbjct: 310 LKKNKAHENDVNSVQWSPGEGNRLLASASDDGMVKIWQ 347
Score = 33.9 bits (74), Expect = 0.12
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Frame = -3
Query: 554 PTKCYSASLAPSRATFVCGGDD-LKVYKYD-----YNTGTELESNRGHFGPVHCVRWSPD 393
P ++ ++P A+ C GD+ +++++ + T LE H V WSP
Sbjct: 30 PVSSHADGVSPILAS--CSGDNTVRIWEQSSLSRSWTCKTVLEET--HTRTVRSCAWSPS 85
Query: 392 GELYASGSEDGTVRLWQ 342
G+L A+ S DGT +W+
Sbjct: 86 GQLLATASFDGTTGIWK 102
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = -3
Query: 464 NTGTELE---SNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGRAY 321
N G+E E + GH V V W+ G A+ S D +V +W+ + G Y
Sbjct: 103 NYGSEFECISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEY 153
Score = 28.7 bits (61), Expect = 4.5
Identities = 36/149 (24%), Positives = 58/149 (38%), Gaps = 13/149 (8%)
Frame = -3
Query: 752 IVSVSDDNTMRVWDRXS------GEEVQKVEFQSVPNSXELSRDGAILTVAH--GTNVSF 597
+ S S DNT+R+W++ S + V + S S G +L A GT +
Sbjct: 42 LASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGIW 101
Query: 596 --YTSDTMRKLREFPVPTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNR---G 432
Y S+ + S S S + D V+ ++ G E + G
Sbjct: 102 KNYGSEFECISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTG 161
Query: 431 HFGPVHCVRWSPDGELYASGSEDGTVRLW 345
H V V+W P ++ S S D T+++W
Sbjct: 162 HTQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -3
Query: 446 ESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
ESN GH V + ++ G+ + S+D T+++W
Sbjct: 207 ESNNGHSSTVWSISFNAAGDKMVTCSDDLTLKIW 240
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 38.3 bits (85), Expect = 0.006
Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 5/134 (3%)
Frame = -3
Query: 731 NTMRVWDRXS--GEEVQKVEFQSVP-NSXELSRDGAILTVA-HGTNVSFYTSDTMRKLRE 564
+T+ +WD S ++ ++ ++ P S ++DG L V + V + + R +R
Sbjct: 130 DTVYLWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHVRT 189
Query: 563 FPVPTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNR-GHFGPVHCVRWSPDGE 387
+ SLA + GG D K+ D + + GH V ++WS G+
Sbjct: 190 LRGGHESRVGSLAWNNHILTTGGMDGKIVNNDVRIRSSIIGTYVGHTEEVCGLKWSESGK 249
Query: 386 LYASGSEDGTVRLW 345
ASG D V +W
Sbjct: 250 KLASGGNDNVVHIW 263
Score = 31.1 bits (67), Expect = 0.84
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -3
Query: 425 GPVHCVRWSPDGELYASGSEDGTVRLWQAVPGRAYGLWRRANET 294
GPV + W+ DG A G ++ V++W V R R +E+
Sbjct: 153 GPVTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHVRTLRGGHES 196
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -3
Query: 473 YDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
+ Y + ++ GH V + SPDG AS + D T+RLW
Sbjct: 357 WKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLW 399
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = -3
Query: 488 LKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGR 327
++V+ + T L + H V C S GE SGS D T+R+WQ V G+
Sbjct: 875 IRVWNVNKKIATLLWDIKEHKSTVTCFSLSETGECVLSGSADKTIRVWQIVKGK 928
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 37.9 bits (84), Expect = 0.007
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = -3
Query: 560 PVPTKCYSASLAP-SRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGEL 384
P+P + + S+ P S + F GD Y +D +G + +GH +H V
Sbjct: 158 PMP-EINAMSVDPQSGSVFTAAGDSC-AYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQ 215
Query: 383 YASGSEDGTVRLWQAVPGR 327
+GSEDGT R+W G+
Sbjct: 216 ILTGSEDGTARIWDCKTGK 234
Score = 31.1 bits (67), Expect = 0.84
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Frame = -3
Query: 758 SRIVSVSDDNTMRVWDRXSGEEVQKVEFQSVPNSXELSR---DG--AILTVAHGTNVSFY 594
S+I++ S+D T R+WD +G+ V+ + Q + +S DG + L G N++ +
Sbjct: 214 SQILTGSEDGTARIWDCKTGKCVKVIGSQDKKSRLRVSSMALDGSESWLVCGQGKNLALW 273
Query: 593 TSDTMRKLREFPVP 552
++ P+P
Sbjct: 274 NLPASECVQTIPIP 287
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -3
Query: 437 RGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGRAYGLWRRA-NETAP 288
+ H G + +++S DG+ AS EDG VR+W+ V + L R NE P
Sbjct: 218 KAHDGAILAMKFSNDGKFLASSGEDGIVRVWKVVEDKKSRLRRDCLNEIDP 268
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -3
Query: 437 RGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGRAYGLW 312
RGH G V + WS D L S S D TVRLW+ G++
Sbjct: 325 RGHTGEVLDISWSKDNYL-LSASMDKTVRLWKVGSNDCLGVF 365
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -3
Query: 437 RGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAV 336
+ H G + +++SPDG AS EDG +R+W V
Sbjct: 248 QAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVV 281
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -3
Query: 434 GHFGPVHCVRWSPDGELYASGSEDGTVRLWQ 342
GH G + + WS + L S S D +VRLWQ
Sbjct: 354 GHSGDILDISWSKNNRLL-SASVDNSVRLWQ 383
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -3
Query: 431 HFGPVHCVRWSP-DGELYASGSEDGTVRLWQA 339
H V V+++P D + + SGS DG VR+W A
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSA 426
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -3
Query: 437 RGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAV 336
+ H G + +++SPDG AS EDG +R+W V
Sbjct: 248 QAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVV 281
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -3
Query: 434 GHFGPVHCVRWSPDGELYASGSEDGTVRLWQ 342
GH G + + WS + L S S D +VRLWQ
Sbjct: 354 GHSGDILDISWSKNNRLL-SASVDNSVRLWQ 383
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -3
Query: 431 HFGPVHCVRWSP-DGELYASGSEDGTVRLWQA 339
H V V+++P D + + SGS DG VR+W A
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSA 426
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 37.5 bits (83), Expect = 0.010
Identities = 24/78 (30%), Positives = 33/78 (42%)
Frame = -3
Query: 542 YSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSED 363
Y A S + G DD V + T L S RGH G + + S + L AS S D
Sbjct: 309 YCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNALVASASND 368
Query: 362 GTVRLWQAVPGRAYGLWR 309
+R+W+ G + R
Sbjct: 369 FVIRVWRLPDGMPISVLR 386
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = -3
Query: 533 SLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSP-DGELYA--SGSED 363
+++ + A +D + + G + RGH G V + +SP +Y S S+D
Sbjct: 354 AVSSNNALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDD 413
Query: 362 GTVRLWQA 339
GT R+W A
Sbjct: 414 GTCRIWDA 421
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -3
Query: 437 RGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
RGH V+C + G +GS+D V++W
Sbjct: 302 RGHRNAVYCAIFDRSGRYVITGSDDRLVKIW 332
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = -3
Query: 542 YSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSED 363
+S + S+ GG D +D +G L + GH V +++ D +L + S D
Sbjct: 226 FSMDILHSKDVIATGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSD 285
Query: 362 GTVRLW 345
TVR+W
Sbjct: 286 KTVRIW 291
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 37.1 bits (82), Expect = 0.013
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -3
Query: 431 HFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGRAYGLWR 309
H V+ +R+SP GEL ASG++ G + +W+ P W+
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWK 103
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 37.1 bits (82), Expect = 0.013
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -3
Query: 431 HFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGRAYGLWR 309
H V+ +R+SP GEL ASG++ G + +W+ P W+
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWK 103
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 37.1 bits (82), Expect = 0.013
Identities = 34/150 (22%), Positives = 64/150 (42%), Gaps = 7/150 (4%)
Frame = -3
Query: 761 NSRIVSVSDDNTMRVWDRXSGEEVQKV-EFQSVPNSXELSRD-GAILTVAHGTN---VSF 597
N + S +DN + VW++ S + V K E + + S +L GT + F
Sbjct: 347 NRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSPHVHGLLASGGGTADRCIRF 406
Query: 596 YTSDTMRKLREFPVPTKCYSASLAPSRATFVC--GGDDLKVYKYDYNTGTELESNRGHFG 423
+ + T L ++ + + + + V G ++ + Y T +++ + GH
Sbjct: 407 WNTTTNTHLSSIDTCSQVCNLAWSKNVNELVSTHGYSQNQIIVWKYPTMSKIATLTGHTY 466
Query: 422 PVHCVRWSPDGELYASGSEDGTVRLWQAVP 333
V + SPDG+ +G+ D T+R W P
Sbjct: 467 RVLYLAVSPDGQTIVTGAGDETLRFWNVFP 496
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 37.1 bits (82), Expect = 0.013
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = -3
Query: 542 YSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSED 363
Y+ ++ + V GG + + +D TG++ RGH V + G SGS D
Sbjct: 217 YALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSD 276
Query: 362 GTVRLW 345
+RLW
Sbjct: 277 SMIRLW 282
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 37.1 bits (82), Expect = 0.013
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = -3
Query: 542 YSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSED 363
Y+ ++ + V GG + + +D TG++ RGH V + G SGS D
Sbjct: 217 YALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSD 276
Query: 362 GTVRLW 345
+RLW
Sbjct: 277 SMIRLW 282
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 37.1 bits (82), Expect = 0.013
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = -3
Query: 551 TKCYSASLAPSRATFV-CGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYAS 375
++C++A P V CG + + G ++S R H V CV + D + A+
Sbjct: 1004 SQCFAAMQMPLENFLVSCGNWENSFHVISLTDGRVVQSIRHHKDVVSCVAVTADSTILAT 1063
Query: 374 GSEDGTVRLW 345
GS D TV +W
Sbjct: 1064 GSYDTTVMVW 1073
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 37.1 bits (82), Expect = 0.013
Identities = 27/78 (34%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = -3
Query: 560 PVPTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSP-DGEL 384
P P +A+ + T D V D TG L+ GH VR+ P E+
Sbjct: 101 PPPRSTIAAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEI 160
Query: 383 YASGSEDGTVRLWQAVPG 330
ASGS D VRLW A G
Sbjct: 161 VASGSLDHEVRLWNAKTG 178
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 37.1 bits (82), Expect = 0.013
Identities = 27/78 (34%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = -3
Query: 560 PVPTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSP-DGEL 384
P P +A+ + T D V D TG L+ GH VR+ P E+
Sbjct: 101 PPPRSTIAAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEI 160
Query: 383 YASGSEDGTVRLWQAVPG 330
ASGS D VRLW A G
Sbjct: 161 VASGSLDHEVRLWNAKTG 178
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 36.7 bits (81), Expect = 0.017
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = -3
Query: 542 YSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSED 363
Y A L S + G DD V + +T L S RGH G + + S + AS S D
Sbjct: 249 YCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNIFIASASND 308
Query: 362 GTVRLWQAVPG 330
+R+W+ G
Sbjct: 309 CVIRVWRLPDG 319
Score = 32.3 bits (70), Expect = 0.36
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = -3
Query: 437 RGHFGPVHCVRWSP-DGELYA--SGSEDGTVRLWQA 339
RGH G V + +SP G Y S S+DGT R+W A
Sbjct: 326 RGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIWDA 361
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 437 RGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
RGH V+C G +GS+D V++W
Sbjct: 242 RGHRNAVYCAILDRSGRYVITGSDDRLVKVW 272
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 36.7 bits (81), Expect = 0.017
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = -3
Query: 533 SLAPSRATFVCGG-DDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGT 357
S+A S ++ V G D + +D GT + H G V +R++ G + ASGS+D
Sbjct: 70 SIASSASSLVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDND 129
Query: 356 VRLWQAVPGRAYGLWR 309
+ LW V G + GL+R
Sbjct: 130 IILWDVV-GES-GLFR 143
Score = 35.9 bits (79), Expect = 0.029
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -3
Query: 434 GHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
GH PV C+ S DGEL +GS+D +++W
Sbjct: 580 GHKLPVMCIDISSDGELIVTGSQDKNLKIW 609
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -3
Query: 497 GDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
G D V +D + L + GH + C+ S G+ +GS D ++R W
Sbjct: 643 GKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRW 693
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 36.7 bits (81), Expect = 0.017
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = -3
Query: 506 VCGGDDLKVYKYDYNTGTELESNR--GHFGPVHCVRWSPDGELYASGSEDGTVRLWQ 342
V G +D VY YD N+ GH PV CV W+ L AS G V +W+
Sbjct: 420 VAGSEDSNVYFYDLTKPKHTCVNKLQGHRFPVMCVAWNHGENLLASSDFYGVVIVWK 476
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 36.3 bits (80), Expect = 0.022
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -3
Query: 521 SRATFV-CGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
+R T++ GDD +V +D + S GH V+C+ P ++ +G D R+W
Sbjct: 228 NRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVW 287
Score = 35.9 bits (79), Expect = 0.029
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 437 RGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPG 330
+GH G V V + P E + +GS D T+++W G
Sbjct: 173 QGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATG 208
Score = 35.1 bits (77), Expect = 0.051
Identities = 29/141 (20%), Positives = 54/141 (38%), Gaps = 3/141 (2%)
Frame = -3
Query: 740 SDDNTMRVWDRXSG--EEVQKVEFQSVPNSXELSRDGAILTVAHGTNVSFYTSDTMRKLR 567
S D T+++WD +G + + V +R + + V + + + +R
Sbjct: 195 SADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIR 254
Query: 566 EFPVPTK-CYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDG 390
+ Y +L P+ + GG D +D T ++ + GH V V P
Sbjct: 255 SYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTD 314
Query: 389 ELYASGSEDGTVRLWQAVPGR 327
+GS D T++ W G+
Sbjct: 315 PQVVTGSHDTTIKFWDLRYGK 335
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 36.3 bits (80), Expect = 0.022
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = -3
Query: 548 KCY-SASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASG 372
+CY S + + + G +D VY YD +G ++ + H PV W P S
Sbjct: 402 RCYFSPAHSTGQKYIYTGSNDSSVYIYDLVSGDKVAVLKHHSSPVRDCNWHPYYPTLISS 461
Query: 371 SEDGTVRLWQAVPG 330
S DG + W+ PG
Sbjct: 462 SWDGDLVKWE-FPG 474
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Frame = -3
Query: 542 YSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPD-GELYASGSE 366
+S + V G D +Y YD H V+ V ++ + G L SGS+
Sbjct: 233 FSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNLILSGSD 292
Query: 365 DGTVRLW 345
D ++W
Sbjct: 293 DNLCKVW 299
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 35.9 bits (79), Expect = 0.029
Identities = 34/143 (23%), Positives = 62/143 (43%), Gaps = 4/143 (2%)
Frame = -3
Query: 761 NSRIVSVSDDNTMRVWDRXSGEEVQKVEFQSVPNSXELSRDGAILTVAHGTNVSFYTSDT 582
+ ++ SVS D T+ +WD SG+ V+ + Q+ S L +G + + V +
Sbjct: 199 SDKLFSVSGDGTLLIWDCNSGQCVRSINLQAEAGS--LISEGPWVFLGLPNAVKAFNVQN 256
Query: 581 MRKLREFPVPTKCYSASLAPSRATFVCGGDDLKVYK---YDYNTGTELESNRGHF-GPVH 414
+ + V + ++ + A + V+K + + L S GH G V
Sbjct: 257 SKDVHLEGVVGQVHAMTAANGMLFAGTSSGSILVWKATDSESDPFKYLTSLEGHHSGEVT 316
Query: 413 CVRWSPDGELYASGSEDGTVRLW 345
C + GE+ SGS D T+++W
Sbjct: 317 C--FVVGGEVLYSGSVDKTIKVW 337
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 35.9 bits (79), Expect = 0.029
Identities = 30/147 (20%), Positives = 64/147 (43%), Gaps = 7/147 (4%)
Frame = -3
Query: 752 IVSVSDDNTMRVWDRXSGEEVQKV-EFQSVPNSXELS-RDGAILTVAHGTN---VSFYTS 588
+ S +DN + VW+ S + + K+ E + + S ++L GT + F+ +
Sbjct: 313 LASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPHQSSLLASGGGTADRCIRFWNT 372
Query: 587 DTMRKLREFPVPTKCYSASLAPSRATFVC--GGDDLKVYKYDYNTGTELESNRGHFGPVH 414
+L ++ + + + + V G ++ + Y + +++ + GH V
Sbjct: 373 TNGNQLNSIDTGSQVCNLAWSKNVNEIVSTHGYSQNQIMLWKYPSMSKVATLTGHSMRVL 432
Query: 413 CVRWSPDGELYASGSEDGTVRLWQAVP 333
+ SPDG+ +G+ D T+R W P
Sbjct: 433 YLATSPDGQTIVTGAGDETLRFWNVFP 459
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 3/108 (2%)
Frame = -3
Query: 659 SXELSRDGAILTV--AHGTNVSFYTSDTMRKLREFPVPTKCYSASLAPSRATFVCGGDDL 486
S + +R+G+ +++ +HG V + +++R + + LA + G D
Sbjct: 220 SVQWTREGSYISIGTSHG-QVQVWDGTQCKRVRTMG-GHQTRTGVLAWNSRILSSGSRDR 277
Query: 485 KVYKYDYNTGTELESNR-GHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
+ ++D ++ S GH V ++WS D ASG D + +W
Sbjct: 278 NILQHDIRVQSDFVSKLVGHKSEVCGLKWSHDDRELASGGNDNQLLVW 325
>At4g21530.1 68417.m03111 transducin family protein / WD-40 repeat
family protein contains 1 WD-40 repeat (PF00400);
similar to anaphase-promoting complex subunit 4
GI:6180011 [Homo sapiens]; supported by EST GB:AU237382
Length = 510
Score = 35.9 bits (79), Expect = 0.029
Identities = 22/78 (28%), Positives = 34/78 (43%)
Frame = -3
Query: 560 PVPTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELY 381
P+P + A P + +D K+ + +N + G PV + W PDG+
Sbjct: 22 PIPFQIKIAEWNPEKDLLAMVTEDSKILLHRFNWQRLWTISPGK--PVTSLCWRPDGKAI 79
Query: 380 ASGSEDGTVRLWQAVPGR 327
A G EDGT+ L G+
Sbjct: 80 AVGLEDGTISLHDVENGK 97
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 35.9 bits (79), Expect = 0.029
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 437 RGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPG 330
+GH G V V + P E + +GS D T+++W G
Sbjct: 167 QGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATG 202
Score = 35.5 bits (78), Expect = 0.039
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -3
Query: 521 SRATFV-CGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
+R T++ GDD +V +D + S GH V+C+ P ++ +G D R+W
Sbjct: 222 NRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVW 281
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/65 (27%), Positives = 25/65 (38%)
Frame = -3
Query: 539 SASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDG 360
S + PS F G D + +D TG + GH G V + S S +D
Sbjct: 175 SVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGDDK 234
Query: 359 TVRLW 345
V+ W
Sbjct: 235 QVKCW 239
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 35.9 bits (79), Expect = 0.029
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = -3
Query: 473 YDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
+D++T + + ++G + C WS DG+ +G ED V++W
Sbjct: 330 FDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTGGEDDLVQVW 372
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 35.5 bits (78), Expect = 0.039
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = -3
Query: 494 DDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAV 336
DD + YD T + RGH + + +S DG+ S S DG++R+W +
Sbjct: 535 DDFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVI 587
Score = 31.1 bits (67), Expect = 0.84
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -3
Query: 494 DDLKVYKYDYNTGTE--LESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAV 336
+ LK++ +D N G L GH P C+R+ +G S +D RL+ +
Sbjct: 290 NSLKMWIFDTNDGDPRLLRFRSGHSAPPLCIRFYSNGRHILSAGQDRAFRLFSVI 344
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = -3
Query: 752 IVSVSDDNTMRVWDRXSGEEVQKVEFQSVPNSXELSRDGAILTVAHGTNVSFY 594
++S S D ++R+WD +++ V + LS + +L AH Y
Sbjct: 572 VISSSMDGSLRIWDVILAKQIDGVHVDVPITALSLSPNMDVLATAHSDQNGVY 624
Score = 27.9 bits (59), Expect = 7.8
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Frame = -3
Query: 551 TKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTELES-NRGHFGPVHCVRWSPDGE-LYA 378
T C S+ P+ G D K++ ++ E+ + G V + +S DG L A
Sbjct: 185 TSCVSS---PALDVVAIGCADGKIHVHNIKLDEEIVTFEHASRGAVTALSFSTDGRPLLA 241
Query: 377 SGSEDGTVRLWQAVPGRAYGLWRRANETA 291
SG G + +W R + R A++++
Sbjct: 242 SGGSFGVISIWNLNKKRLQSVIRDAHDSS 270
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 35.5 bits (78), Expect = 0.039
Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 11/135 (8%)
Frame = -3
Query: 716 WDRXSGEEVQKVEFQSVPNSXELSRDGAIL--TVAHGTNVSFYTSDTMRKLREFPV-PTK 546
WD E + V S + + DG+++ + + GT++ + T R L K
Sbjct: 182 WDHHHIHEKRSVLTISGATATYGTADGSVVIASCSEGTDIVLWHGKTGRNLGHVDTNQLK 241
Query: 545 CYSASLAPSRATFVCGG--DDLKVYKYDYNT-GTELESNR-----GHFGPVHCVRWSPDG 390
+ A+++P+ D+KV++ Y G+ E +R GH V + +SP+
Sbjct: 242 NHMAAVSPNGRFLAAAAFTADVKVWEIVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNS 301
Query: 389 ELYASGSEDGTVRLW 345
E + S+DG++R+W
Sbjct: 302 EQIITASKDGSIRVW 316
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 35.5 bits (78), Expect = 0.039
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -3
Query: 473 YDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
+D+ T + + ++G + C WS DG+ +G ED V++W
Sbjct: 330 FDFLTQKLVCGGKSYYGALLCCSWSMDGKYILTGGEDDLVQVW 372
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 35.5 bits (78), Expect = 0.039
Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Frame = -3
Query: 650 LSRDGAIL-TVAHGTNVSFYTSDTMRKLREFPVPTKCYSA-SLAPSRATFVCG-GDDLKV 480
+S+ IL T ++ + F+ ++T R R P + + P + +++
Sbjct: 1 MSQPSVILATASYDHTIRFWEAETGRCYRTIQYPDSHVNRLEITPDKHYLAAACNPHIRL 60
Query: 479 YKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQ-AVPG 330
+ + N+ + + H V V + D + SGSEDGTV++W PG
Sbjct: 61 FDVNSNSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPG 111
Score = 29.5 bits (63), Expect = 2.6
Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 12/156 (7%)
Frame = -3
Query: 758 SRIVSVSDDNTMRVWD-RXSGEEVQKV-EFQSVPNSXELSRDGAILTVAH--GTNVSFYT 591
+ ++S + +RVWD R + + V E + S + DG ++ A+ GT +
Sbjct: 132 TELISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVMWDGTMVVAANNRGTCYVWRL 191
Query: 590 SDTMRKLREFPVPTKCYSAS-------LAPSRATFVCGGDDLKVYKYDYNTGTELESN-R 435
+ + EF K + + L+P+ D V ++ + G +LE
Sbjct: 192 LRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTVKIWNVD-GFKLEKVLT 250
Query: 434 GHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGR 327
GH V +S DGE + S D T RLW G+
Sbjct: 251 GHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGK 286
Score = 28.7 bits (61), Expect = 4.5
Identities = 30/141 (21%), Positives = 61/141 (43%), Gaps = 5/141 (3%)
Frame = -3
Query: 752 IVSVSDDNTMRVWDRXSGEEVQKVEF-QSVPNSXELSRDGAILTVAHGTNVSFY--TSDT 582
+ + S D+T+R W+ +G + +++ S N E++ D L A ++ + S++
Sbjct: 8 LATASYDHTIRFWEAETGRCYRTIQYPDSHVNRLEITPDKHYLAAACNPHIRLFDVNSNS 67
Query: 581 MRKLREFPVPTKCYSASLAPSRATFV-CGGDDLKVYKYDYNT-GTELESNRGHFGPVHCV 408
+ + + T A A ++ G +D V +D G + E V+ V
Sbjct: 68 PQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYE--SVAAVNTV 125
Query: 407 RWSPDGELYASGSEDGTVRLW 345
P+ SG ++G +R+W
Sbjct: 126 VLHPNQTELISGDQNGNIRVW 146
>At2g46560.1 68415.m05808 transducin family protein / WD-40 repeat
family protein similar to CPY (GI:3096961) {Chironomus
thummi}; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies, 3 weak)|9780477|gb|BE522499.1|BE522499
Length = 2471
Score = 35.1 bits (77), Expect = 0.051
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -3
Query: 437 RGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGRAYGLWRRANE 297
+ H G V + P L+ +GS+DG V+LW A + W + +E
Sbjct: 2372 KAHLGSVTKIATIPRTSLFLTGSKDGEVKLWDAKAAKLIHHWPKLHE 2418
Score = 29.5 bits (63), Expect = 2.6
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 18/117 (15%)
Frame = -3
Query: 620 AH-GTNVSFYTSDTMRKLREF--PVPTK----CYSASLAPSRATFVCGGDDLKVYKYDYN 462
AH G VS +T + EF P PT + S P+ F+ G + +Y +++
Sbjct: 2125 AHLGLGVSGLGWETQEEFEEFVDPPPTVESVITRAFSNHPTMPLFLVGSSNTHIYLWEFG 2184
Query: 461 ----TGTELESNRGHFGP------VHCVRWSPDGELYASGSEDGTVRLWQA-VPGRA 324
T T + P + V++ P G +AS + DGTV WQ+ V GR+
Sbjct: 2185 NERATATYGVLPAANVSPPYALASISAVQFGPFGHRFASAALDGTVCTWQSEVGGRS 2241
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 34.7 bits (76), Expect = 0.068
Identities = 34/150 (22%), Positives = 63/150 (42%), Gaps = 7/150 (4%)
Frame = -3
Query: 761 NSRIVSVSDDNTMRVWDRXSGEEVQKV-EFQSVPNSXELS-RDGAILTVAHGTN---VSF 597
N + S +DN + VW++ S + V + E + + S +L GT + F
Sbjct: 304 NRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSPHHFGLLASGGGTADRCIRF 363
Query: 596 YTSDTMRKLREFPVPTKCYSASLAPSRATFVC--GGDDLKVYKYDYNTGTELESNRGHFG 423
+ + T L ++ + + + V G ++ + Y T ++L + GH
Sbjct: 364 WNTTTNTHLNCVDTNSQVCNLVWSKNVNELVSTHGYSQNQIIVWKYPTMSKLATLTGHSY 423
Query: 422 PVHCVRWSPDGELYASGSEDGTVRLWQAVP 333
V + SPDG+ +G+ D T+R W P
Sbjct: 424 RVLYLAVSPDGQTIVTGAGDETLRFWNVFP 453
Score = 31.9 bits (69), Expect = 0.48
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = -3
Query: 533 SLAPSRATFVCGGDDLKVYKYDYNTGTELESN-RGHFGPVHCVRWSPDGELYASGSEDGT 357
+LA S + G D + + D T + S +GH + ++WS D ASG D
Sbjct: 256 ALAWSSSVLSSGSRDKSILQRDIRTQEDHVSKLKGHKSEICGLKWSSDNRELASGGNDNK 315
Query: 356 VRLW 345
+ +W
Sbjct: 316 LFVW 319
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 33.9 bits (74), Expect = 0.12
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 410 VRWSPDGELYASGSEDGTVRLWQA 339
V WSPD + SGS DG +R W A
Sbjct: 204 VTWSPDAKRIFSGSSDGLIRCWDA 227
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 33.9 bits (74), Expect = 0.12
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 9/121 (7%)
Frame = -3
Query: 680 EFQSVPNSXELSRDGAILTVAHGTNV----SFYTSDTMRKLREFPVPT---KCYSASLAP 522
E+ + N S DG +L VA+ ++ S++ + +R E + S
Sbjct: 417 EYTAAVNRVVWSPDGGLLGVAYSKHIVHIYSYHGGEDLRNHLEIDAHAGNVNDLAFSQPN 476
Query: 521 SRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVH--CVRWSPDGELYASGSEDGTVRL 348
+ V G+D + +D TG +L + GH PV+ C + + S + DG ++
Sbjct: 477 QQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKA 536
Query: 347 W 345
W
Sbjct: 537 W 537
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 33.9 bits (74), Expect = 0.12
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 9/121 (7%)
Frame = -3
Query: 680 EFQSVPNSXELSRDGAILTVAHGTNV----SFYTSDTMRKLREFPVPT---KCYSASLAP 522
E+ + N S DG +L VA+ ++ S++ + +R E + S
Sbjct: 417 EYTAAVNRVVWSPDGGLLGVAYSKHIVHIYSYHGGEDLRNHLEIDAHAGNVNDLAFSQPN 476
Query: 521 SRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVH--CVRWSPDGELYASGSEDGTVRL 348
+ V G+D + +D TG +L + GH PV+ C + + S + DG ++
Sbjct: 477 QQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKA 536
Query: 347 W 345
W
Sbjct: 537 W 537
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -3
Query: 497 GDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
G D +D T + +GH V V +SP+G ASG ED R+W
Sbjct: 149 GFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIW 199
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -3
Query: 512 TFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
T GG D + + +G + + H GP+ + W P L A+GS D T++ W
Sbjct: 86 TVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYW 141
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = -3
Query: 491 DLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
D KV + D+N G E + H PV CV +S +GS D T++ W
Sbjct: 77 DTKVRRIDFNAGKE-DVLGTHEKPVRCVEYSYAAGQVITGSWDKTIKCW 124
Score = 31.9 bits (69), Expect = 0.48
Identities = 40/157 (25%), Positives = 63/157 (40%), Gaps = 20/157 (12%)
Frame = -3
Query: 755 RIVSVSDDNTMRVWDRX--SGEEVQKVEFQSVPNSXE-LSRDGAILTVAH-GTNVSFYTS 588
++++ S D T++ WD SG E ++ P LS G L VA G +V+ Y
Sbjct: 111 QVITGSWDKTIKCWDPRGASGTERTQIGTYMQPERVNSLSLVGNRLVVATAGRHVNIYDL 170
Query: 587 DTM-----RKLREFPVPTKC---------YSASLAPSRAT--FVCGGDDLKVYKYDYNTG 456
M R+ T+C Y+ S R + F + + KY +
Sbjct: 171 RNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVSMEFFDLSEAAQAKKYAFKCH 230
Query: 455 TELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
+ E R PV+ + + P +ASG DG V +W
Sbjct: 231 RKSEDGRDIVYPVNAIAFHPIYGTFASGGCDGFVNIW 267
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 33.5 bits (73), Expect = 0.16
Identities = 37/151 (24%), Positives = 65/151 (43%), Gaps = 20/151 (13%)
Frame = -3
Query: 737 DDNTMRVWDRXSGEEVQKVEFQSVPNSXELSRDGA-ILTVAHGTNVSFYTSDTMR-KLRE 564
+DN + E+Q + +S + GA +L+ ++ V Y M +L+
Sbjct: 156 NDNEENRYQIPLSNEIQLKGHTKIVSSLAVDSAGARVLSGSYDYTVRMYDFQGMNSRLQS 215
Query: 563 FPV--PTKCY---SASLAPSRATFVC--GGDDLKVYKYDYNTGTE----------LESNR 435
F P++ + S S +P+ F+C G K++ D T E L++ +
Sbjct: 216 FRQIEPSEGHQVRSVSWSPTSGQFLCVTGSAQAKIFDRDGLTLGEFMKGDMYIRDLKNTK 275
Query: 434 GHFGPVHCVRWSP-DGELYASGSEDGTVRLW 345
GH + C W P E + SEDG++R+W
Sbjct: 276 GHICGLTCGEWHPRTKETVLTSSEDGSLRIW 306
Score = 32.7 bits (71), Expect = 0.27
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -3
Query: 422 PVHCVRWSPDGELYASGSEDGTVRLWQAVPG 330
PV W DG+ A G DG++++W PG
Sbjct: 329 PVTTCAWDRDGKRIAGGVGDGSIQIWSLKPG 359
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/44 (25%), Positives = 24/44 (54%)
Frame = -3
Query: 476 KYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
K + + ++ + H + V++S DG + S S DG++++W
Sbjct: 357 KPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLSRSFDGSLKVW 400
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 431 HFGPVHCVRWSPDGELYASGSEDGTVRLW 345
H G + +++SPDG+ AS ED VR+W
Sbjct: 217 HDGSILAMKFSPDGKYIASAGEDCVVRVW 245
Score = 31.9 bits (69), Expect = 0.48
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -3
Query: 449 LESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQ 342
L +GH G + + WS G L +S S D TVRLW+
Sbjct: 315 LHEFKGHIGEILDLSWSEKGYLLSS-SVDETVRLWR 349
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -3
Query: 431 HFGPVHCVRWSP-DGELYASGSEDGTVRLW 345
H V CV ++P D + SGS DG VR+W
Sbjct: 361 HNNFVTCVAFNPVDDNYFISGSIDGKVRIW 390
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 431 HFGPVHCVRWSPDGELYASGSEDGTVRLW 345
H G + +++SPDG+ AS ED VR+W
Sbjct: 217 HDGSILAMKFSPDGKYIASAGEDCVVRVW 245
Score = 31.9 bits (69), Expect = 0.48
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -3
Query: 449 LESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQ 342
L +GH G + + WS G L +S S D TVRLW+
Sbjct: 315 LHEFKGHIGEILDLSWSEKGYLLSS-SVDETVRLWR 349
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -3
Query: 431 HFGPVHCVRWSP-DGELYASGSEDGTVRLW 345
H V CV ++P D + SGS DG VR+W
Sbjct: 361 HNNFVTCVAFNPVDDNYFISGSIDGKVRIW 390
>At1g64350.1 68414.m07292 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to nuclear pore protein SEH1 (SP:P53011)
[Saccharomyces cerevisiae]
Length = 326
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -3
Query: 452 ELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQA 339
++ S GH G V + W G AS DG V+LWQ+
Sbjct: 272 KVSSLSGHQGEVWQMEWDMSGMTLASTGSDGMVKLWQS 309
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 33.1 bits (72), Expect = 0.21
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -3
Query: 434 GHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
GH G V+ + W+ +G L SGS+D + +W
Sbjct: 48 GHQGCVNALAWNSNGSLLISGSDDLRINIW 77
Score = 32.3 bits (70), Expect = 0.36
Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = -3
Query: 557 VPTKCYSASLAPSRATFVCGG-DDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELY 381
V T AS R ++ G DD + + ++ TG ++ G ++C++ P +
Sbjct: 619 VGTDIKQASFLGQRGEYIASGSDDGRWFIWEKQTGRLMKVLVGDESVLNCIQCHPFDSVV 678
Query: 380 ASGSEDGTVRLW 345
A+ D T+++W
Sbjct: 679 ATSGIDNTIKIW 690
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 33.1 bits (72), Expect = 0.21
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -3
Query: 500 GGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWS-PDGELYASGSEDGTVRLW 345
GG D V+ +D T +++ GH V C+ + ELY SGS D TV++W
Sbjct: 240 GGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELY-SGSFDRTVKVW 291
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -3
Query: 383 YASGSEDGTVRLWQAVPGRAYGLWRRANETAP 288
Y SGS++GTV LW + + +++ A++ P
Sbjct: 360 YLSGSDNGTVALWGMLKKKPVFVFKNAHQDIP 391
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 33.1 bits (72), Expect = 0.21
Identities = 28/121 (23%), Positives = 48/121 (39%), Gaps = 3/121 (2%)
Frame = -3
Query: 638 GAILTVAHGTNVSFYTSDTMRKLREFPVPTKC---YSASLAPSRATFVCGGDDLKVYKYD 468
G ++TV ++ + ++ + +R F L PS VC + + D
Sbjct: 539 GLVVTVGQDKKINIFDIESGKLVRSFKQDRDHGDPVKVILDPSCNYLVCSYSNRTICFVD 598
Query: 467 YNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGRAYGLWRRANETAP 288
+ TG + GH V V + PD + S + DG + +W+ A + R NE
Sbjct: 599 FVTGELVAQATGHGEAVTGVIFLPDCKHIISVASDGCIFVWKLPLRMATRIIRAVNENGR 658
Query: 287 L 285
L
Sbjct: 659 L 659
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = -3
Query: 422 PVHCVRWSPDGELYASGSEDGTVRLW 345
P+ C +SPDGE ASGS DG+V ++
Sbjct: 389 PIKC-NFSPDGETLASGSSDGSVYMY 413
Score = 31.5 bits (68), Expect = 0.63
Identities = 27/125 (21%), Positives = 49/125 (39%), Gaps = 12/125 (9%)
Frame = -3
Query: 734 DNTMRVWDRXSGEEVQK---VEFQSVPNSXELSRDGAILTVAHGTNVSFYTSDTMRKLRE 564
+N + VWD + VE + P +D + +HG + ++++ KL +
Sbjct: 317 ENAVIVWDISREVPLSNQVYVEAYTCPCIKRHPQDPVFIAQSHGNYTAIFSTNPPFKLNK 376
Query: 563 FP---------VPTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHC 411
+ P KC + +P T G D VY YDY + ++ + + P
Sbjct: 377 YKRFEGHWVAGFPIKC---NFSPDGETLASGSSDGSVYMYDYKSTALIKKLKAYEQPCVN 433
Query: 410 VRWSP 396
V + P
Sbjct: 434 VSYHP 438
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 32.7 bits (71), Expect = 0.27
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -3
Query: 488 LKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
L Y+ + G LE ++G P+ ++PDG+ SGS DGT+ W
Sbjct: 227 LDAYRGEKKCGFSLEPSQGT--PIEAT-FTPDGKYVLSGSGDGTLHAW 271
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/103 (20%), Positives = 42/103 (40%), Gaps = 5/103 (4%)
Frame = -3
Query: 662 NSXELSRDGAILTVAHGTNVSFYTSDTMRKLREF-----PVPTKCYSASLAPSRATFVCG 498
N + S DG + + TN + Y D R ++ P A+ P + G
Sbjct: 204 NDIKFSNDGKSMLLTT-TNNNIYVLDAYRGEKKCGFSLEPSQGTPIEATFTPDGKYVLSG 262
Query: 497 GDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGS 369
D ++ ++ +E+ + G V C++W+P ++ + S
Sbjct: 263 SGDGTLHAWNIENPSEVARWENNIGVVSCLKWAPRRAMFVAAS 305
Score = 27.9 bits (59), Expect = 7.8
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = -3
Query: 539 SASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDG 360
S+ + SR G+ L+ Y Y+ L +GH V + SP + + SGS D
Sbjct: 79 SSLICSSRYNLESTGESLR-YLSMYDNRI-LRYFKGHKDRVVSLCMSPINDSFMSGSLDR 136
Query: 359 TVRLW 345
+VRLW
Sbjct: 137 SVRLW 141
>At3g56900.1 68416.m06329 aladin-related / adracalin-related weak
similarity to SP|Q9NRG9 Aladin (Adracalin) (GL003) {Homo
sapiens}; non-consensus AT-AC splice sites at intron 6
Length = 447
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -3
Query: 473 YDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQ 342
+D + G RG G + ++WSP G+ + + DGT LW+
Sbjct: 240 WDVSQGAGTPIRRG-LGGISMLKWSPTGDYFFAARFDGTFCLWE 282
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 32.7 bits (71), Expect = 0.27
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -3
Query: 437 RGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGRAYG 318
+ H G + +++S DG+ AS ED + +WQ V G
Sbjct: 410 QAHNGSIWSIKFSLDGKYLASAGEDCIIHIWQVVEAEKKG 449
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -3
Query: 431 HFGPVHCVRWSP-DGELYASGSEDGTVRLWQAVPGRAYGLWRRANE 297
H V C++++P D + SGS D VR+W ++P R W +E
Sbjct: 552 HSDYVTCIQFNPVDDRYFISGSLDAKVRVW-SIPDRQVVDWYDLHE 596
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 32.7 bits (71), Expect = 0.27
Identities = 27/95 (28%), Positives = 37/95 (38%), Gaps = 12/95 (12%)
Frame = -3
Query: 524 PSRATFVCGGDDLKVYKYD-YNTG--TELESNRGHFG---------PVHCVRWSPDGELY 381
P R GG D K+ Y TG T + +GH P+H P+ +
Sbjct: 188 PGRFALALGGLDNKIKLYSGERTGKFTSVCELKGHTDWIRSLDFSLPLHTTEEIPNSIML 247
Query: 380 ASGSEDGTVRLWQAVPGRAYGLWRRANETAPLANG 276
S S+D +R+W+ V G WRR A G
Sbjct: 248 VSSSQDKVIRIWKLVLVGDVGSWRREITLASYIEG 282
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 434 GHFGPVHCVRWSPDGELYASGSEDGTVRLWQA 339
GHF V V W+ GE S S+D T R++ A
Sbjct: 413 GHFAAVTDVTWARTGEYLLSVSQDQTTRVFSA 444
Score = 28.3 bits (60), Expect = 5.9
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -3
Query: 404 WSPDGELYASGSEDGTVRLW 345
W+P G +A+ S D TV++W
Sbjct: 704 WNPFGHQFATSSRDKTVKIW 723
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 32.3 bits (70), Expect = 0.36
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -3
Query: 488 LKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQ 342
L+ YD + N + C S DG + +G+EDG V +W+
Sbjct: 3254 LRFMSYDQDKLLSTHENLHEGNQIQCAGVSHDGRIVVTGAEDGLVSVWR 3302
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 32.3 bits (70), Expect = 0.36
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -3
Query: 434 GHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPG 330
GH G V+ V ++ G++ SGS+D + LW + G
Sbjct: 53 GHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSG 87
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 32.3 bits (70), Expect = 0.36
Identities = 20/73 (27%), Positives = 29/73 (39%)
Frame = -3
Query: 488 LKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGRAYGLWR 309
L+ YD + N + C S DG + +G+EDG V +W+ G R
Sbjct: 3310 LRFMSYDQDKLLSTHENLHESNQIQCAGVSHDGRIVVTGAEDGLVCVWRVSKDGPRGSRR 3369
Query: 308 RANETAPLANGYK 270
E A A+ K
Sbjct: 3370 LRLEKALCAHTAK 3382
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 431 HFGPVHCVRWSPDGELYASGSEDGTVRLW 345
H V C+R S + ASGS+D TV +W
Sbjct: 3379 HTAKVTCLRVSQPYMMIASGSDDCTVIIW 3407
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 31.9 bits (69), Expect = 0.48
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = -3
Query: 554 PTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPD-GELYA 378
P +A+ + T D V D TG L+ GH VR+ P E+ A
Sbjct: 106 PRSTIAAAFSTDGRTLASTHGDHTVKIIDCETGNCLKVLTGHRRTPWVVRFHPHHSEIVA 165
Query: 377 SGSEDGTVRLW 345
SGS D VRLW
Sbjct: 166 SGSLDLEVRLW 176
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 31.9 bits (69), Expect = 0.48
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Frame = -3
Query: 758 SRIVSVSDDNTMRVWDRXSGEEVQKVEF-QSVPNSXELSRDGAILTVAHGTNVSFYTSD- 585
S+IVSVSDD + R+W+ S E V V F SV D I+T + D
Sbjct: 248 SKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCISDSLIVTAGEDCTCRVWGVDG 307
Query: 584 TMRKLREFPVPTKCYSASLAPSRATFVCGGDD--LKVYKYDYNTGTE 450
T ++ + + + P+ + V G D +KV++ +N G+E
Sbjct: 308 TQLEVIKEHIGRGIWRCLYDPNSSLLVTAGFDSAIKVHQL-HNRGSE 353
Score = 31.5 bits (68), Expect = 0.63
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 434 GHFGPVHCVRWSPDGELYASGSEDGTVRLWQ 342
GH G + + WS DG S S+D + R+W+
Sbjct: 233 GHEGSIFRIVWSLDGSKIVSVSDDRSARIWE 263
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 31.9 bits (69), Expect = 0.48
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Frame = -3
Query: 758 SRIVSVSDDNTMRVWDRXSGEEVQKVEF-QSVPNSXELSRDGAILTVAHGTNVSFYTSD- 585
S+IVSVSDD + R+W+ S E V V F SV D I+T + D
Sbjct: 248 SKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCISDSLIVTAGEDCTCRVWGVDG 307
Query: 584 TMRKLREFPVPTKCYSASLAPSRATFVCGGDD--LKVYKYDYNTGTE 450
T ++ + + + P+ + V G D +KV++ +N G+E
Sbjct: 308 TQLEVIKEHIGRGIWRCLYDPNSSLLVTAGFDSAIKVHQL-HNRGSE 353
Score = 31.5 bits (68), Expect = 0.63
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 434 GHFGPVHCVRWSPDGELYASGSEDGTVRLWQ 342
GH G + + WS DG S S+D + R+W+
Sbjct: 233 GHEGSIFRIVWSLDGSKIVSVSDDRSARIWE 263
>At2g19540.1 68415.m02283 transducin family protein / WD-40 repeat
family protein contains WD-40 repeats (PF00400); similar
to Glutamate-rich WD repeat protein (GRWD)
(SP:Q9BQ67)[Homo sapiens]
Length = 469
Score = 31.9 bits (69), Expect = 0.48
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -3
Query: 434 GHFGPVHCVRWSPDGE-LYASGSEDGTVRLWQAVPGRAYGLWRRAN 300
GH V ++WSP E ++AS S DG+V +W G++ L +A+
Sbjct: 267 GHTASVEDLQWSPAEENVFASCSVDGSVAVWDIRLGKSPALSFKAH 312
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 31.5 bits (68), Expect = 0.63
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -3
Query: 437 RGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGRAYG 318
+ H G + +++S DG AS ED +++W+ V G
Sbjct: 360 QAHKGSIWSIKFSLDGRYLASAGEDCVIQIWKVVESERKG 399
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -3
Query: 431 HFGPVHCVRWSP-DGELYASGSEDGTVRLWQAVPGRAYGLWRRANETAPLA 282
H V C++++P D + SGS D VR+W ++P W +E A
Sbjct: 507 HSDYVTCIQFNPVDDNYFISGSLDAKVRIW-SIPDHQVVDWNDLHEMVTAA 556
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 31.5 bits (68), Expect = 0.63
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -3
Query: 437 RGHFGPVHCVRWSPDGELYASGSEDGTVRLWQ 342
RGH G + + WS G L +S S D TVRLW+
Sbjct: 360 RGHTGEILDLSWSEKGFLLSS-SVDETVRLWR 390
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -3
Query: 431 HFGPVHCVRWSPDGELYASGSEDGTVRLWQAV 336
H G + +++S DG+ AS ED VR+W +
Sbjct: 256 HDGSIVVMKFSHDGKYLASAGEDCVVRVWNII 287
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -3
Query: 431 HFGPVHCVRWSP-DGELYASGSEDGTVRLW 345
H V CV ++P D + SGS DG VR+W
Sbjct: 403 HKSFVTCVAFNPVDDNYFISGSIDGKVRIW 432
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 31.5 bits (68), Expect = 0.63
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = -3
Query: 470 DYNTGTE-LESNRGHFGPVHCVRWSPDGE-LYASGSEDGTVRLWQ 342
D N G E ++ GH V V W+P + + AS S D TVR+W+
Sbjct: 5 DKNLGLEEVQKLEGHTDRVWNVAWNPAADGVIASCSADKTVRIWE 49
Score = 31.1 bits (67), Expect = 0.84
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3
Query: 437 RGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVP 333
RGH V V W+ G L A+ D +V +W+ P
Sbjct: 89 RGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQP 123
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -3
Query: 470 DYNTGTEL-ESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQ 342
DYN L E N GH V + ++ G+ + S+D V++W+
Sbjct: 174 DYNCVQTLSELNNGHSSTVWSISFNAAGDKMVTCSDDLAVKIWK 217
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 31.5 bits (68), Expect = 0.63
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = -3
Query: 473 YDYNTGTELESNRGHFGPVHCVRWSP-DGELYASGSEDGTVRLWQAVPGRAYG-LWRRAN 300
+D TG H V +SP D + SGS+D +V+LW R+ G +W AN
Sbjct: 793 WDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWSINEKRSLGTIWSPAN 852
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 31.5 bits (68), Expect = 0.63
Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
Frame = -3
Query: 632 ILTVAHGTNVSFYTSDTMRKLREFPVPTKCYSA-SLAPSRATFVCG-GDDLKVYKY-DYN 462
+ T +H + + + T R F P + L P + V ++++ YN
Sbjct: 13 LATASHDQTIRLWQARTGRCYFSFRYPDLHVNRLELTPEKGKLVAACNPHIRLFDLRSYN 72
Query: 461 TGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
+ + H V V + G + SGSEDG+V++W
Sbjct: 73 PHIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIW 111
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 395 DGELY-ASGSEDGTVRLWQAVPGRAYGLWR 309
D +Y A+ S D T+RLWQA GR Y +R
Sbjct: 8 DSPVYLATASHDQTIRLWQARTGRCYFSFR 37
Score = 29.5 bits (63), Expect = 2.6
Identities = 30/141 (21%), Positives = 54/141 (38%), Gaps = 5/141 (3%)
Frame = -3
Query: 752 IVSVSDDNTMRVWDRXSGEEVQKVEFQSVP-NSXELSRDGAILTVAHGTNVSFYTSDTMR 576
+ + S D T+R+W +G + + N EL+ + L A ++ + +
Sbjct: 13 LATASHDQTIRLWQARTGRCYFSFRYPDLHVNRLELTPEKGKLVAACNPHIRLFDLRSYN 72
Query: 575 K---LREFPVPTKCYSA-SLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCV 408
+R F TK A + G +D V +D E + PV+ V
Sbjct: 73 PHIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRV-RECQREFRSVSPVNTV 131
Query: 407 RWSPDGELYASGSEDGTVRLW 345
P+ SG ++G +R+W
Sbjct: 132 VLHPNQTELISGDQNGNIRVW 152
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 31.1 bits (67), Expect = 0.84
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -3
Query: 437 RGHFGPVHCVRWSPDGELYASGSEDGTVRLWQ 342
+ H G + +++SPD L AS ED + +W+
Sbjct: 408 QAHQGGIWTMKFSPDSHLLASAGEDCAIHVWE 439
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -3
Query: 431 HFGPVHCVRWSP-DGELYASGSEDGTVRLWQAVPGRAYGLWRRANE 297
H V CV+++P D + + SGS D +R+W + R W E
Sbjct: 558 HNDYVTCVQFNPLDEDYFISGSLDAKIRIWN-ISNRQVVEWNDLKE 602
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 31.1 bits (67), Expect = 0.84
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = -3
Query: 521 SRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSP-DGELYASGSEDGTVRL 348
+R G +D KV +D TG + H VH V W+ E+ SGS D TV L
Sbjct: 226 NRNIVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVL 284
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 31.1 bits (67), Expect = 0.84
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -3
Query: 401 SPDGELYASGSEDGTVRLWQ 342
SPDGE SGS DG +WQ
Sbjct: 347 SPDGEYVLSGSSDGNAYIWQ 366
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = -3
Query: 437 RGHFGPVHCVRWSPD--GELYASGSEDGTVRLWQAVPGRAYGLWRRANETAPLANGYKEV 264
+GH V V WSP G++ A+ S+D TVRLW + AN TA ++ + V
Sbjct: 378 KGHDFEVTAVDWSPSEIGKV-ATASDDFTVRLWNI----ENNICTNANATASVSRVKRRV 432
Query: 263 PA 258
A
Sbjct: 433 TA 434
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 31.1 bits (67), Expect = 0.84
Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 5/142 (3%)
Frame = -3
Query: 755 RIVSVSDDNTMRVWDRXSGEEVQKVEFQSVPNSXELSRDGAILTVAHGTNVSFYTSDTMR 576
R+VS S D + VW+ +GE +Q ++ ++ G + + + VS T++
Sbjct: 85 RLVSGSMDTFVFVWNLMNGENIQTLK------GHQMQVTG--VAIDNEDIVSSSVDQTLK 136
Query: 575 KLREFPVPTKCYSASLAPSRATFVCGGDDLKVYKYD-----YNTGTELESNRGHFGPVHC 411
+ R + + + A +P +A +L D + T L++ GH V
Sbjct: 137 RWRNGQL-VESWDAHQSPIQAVIRLPSGELVSGSSDASLKLWKGKTSLQTLSGHTDTVRG 195
Query: 410 VRWSPDGELYASGSEDGTVRLW 345
+ PD + S S DG++RLW
Sbjct: 196 LAVMPDLG-FLSASHDGSIRLW 216
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 31.1 bits (67), Expect = 0.84
Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 5/142 (3%)
Frame = -3
Query: 755 RIVSVSDDNTMRVWDRXSGEEVQKVEFQSVPNSXELSRDGAILTVAHGTNVSFYTSDTMR 576
R+VS S D + VW+ +GE +Q ++ ++ G + + + VS T++
Sbjct: 85 RLVSGSMDTFVFVWNLMNGENIQTLK------GHQMQVTG--VAIDNEDIVSSSVDQTLK 136
Query: 575 KLREFPVPTKCYSASLAPSRATFVCGGDDLKVYKYD-----YNTGTELESNRGHFGPVHC 411
+ R + + + A +P +A +L D + T L++ GH V
Sbjct: 137 RWRNGQL-VESWDAHQSPIQAVIRLPSGELVSGSSDASLKLWKGKTSLQTLSGHTDTVRG 195
Query: 410 VRWSPDGELYASGSEDGTVRLW 345
+ PD + S S DG++RLW
Sbjct: 196 LAVMPDLG-FLSASHDGSIRLW 216
>At2g25420.1 68415.m03045 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (3 repeats)
Length = 717
Score = 31.1 bits (67), Expect = 0.84
Identities = 26/127 (20%), Positives = 48/127 (37%), Gaps = 1/127 (0%)
Frame = -3
Query: 722 RVWDRXSGEEVQKVEFQSVPNSXE-LSRDGAILTVAHGTNVSFYTSDTMRKLREFPVPTK 546
R+ SG+ ++ SV S + G+ L G ++ + K+ F PT
Sbjct: 412 RLHQPQSGKTMENEMATSVQKSTSCFAVKGSYLFSTSGGKIAVFDLKNFEKVASFGSPTP 471
Query: 545 CYSASLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSE 366
+ + G DD ++ + ++ E GH + C+ +S + S
Sbjct: 472 MATYFIFIPGDLLAVGLDDGSIFIHCLSSRKVKEKLEGHDQKITCLAFSRCFNVLVSSDS 531
Query: 365 DGTVRLW 345
DG + LW
Sbjct: 532 DGKLCLW 538
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 31.1 bits (67), Expect = 0.84
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3
Query: 401 SPDGELYASGSEDGTVRLWQAVPGRAYG 318
S D L ASGS+DG+V+LW G + G
Sbjct: 586 SADPTLLASGSDDGSVKLWSINQGVSIG 613
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 31.1 bits (67), Expect = 0.84
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3
Query: 401 SPDGELYASGSEDGTVRLWQAVPGRAYG 318
S D L ASGS+DG+V+LW G + G
Sbjct: 586 SADPTLLASGSDDGSVKLWSINQGVSIG 613
>At1g27470.1 68414.m03349 transducin-related / WD-40 repeat
protein-related contains 6 WD-40 repeats (PF00400) (2
weak); related to KIAA1988 protein (GI:18916910) [Homo
sapiens]
Length = 810
Score = 31.1 bits (67), Expect = 0.84
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -3
Query: 410 VRWSPDGELYASGSEDGTVRLWQA 339
V WS D + SGS DG +R W A
Sbjct: 204 VTWSADAQRIFSGSSDGLIRCWDA 227
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 422 PVHCVRWSPDGELYASGSEDGTVRLWQAVPG 330
PV + S DG A+ EDG++ LW PG
Sbjct: 15 PVVALATSADGSQVAAAREDGSLELWLVSPG 45
>At5g52250.1 68418.m06485 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to photomorphogenesis repressor PnCOP1
(GI:11127996) [Ipomoea nil]
Length = 385
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 7/77 (9%)
Frame = -3
Query: 554 PTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTELE-SNRGHFGPVHCVRWSPDGELY- 381
P K S P + V G D +Y+ ++ S R G WS D LY
Sbjct: 121 PAKLSSLKWRPDFSGRVIGSGDYDGVVTEYDVEKQVPVSERDEHGGRRI--WSVDYTLYN 178
Query: 380 -----ASGSEDGTVRLW 345
ASGS+DGTV++W
Sbjct: 179 GSLIGASGSDDGTVQMW 195
Score = 29.9 bits (64), Expect = 1.9
Identities = 37/140 (26%), Positives = 56/140 (40%), Gaps = 9/140 (6%)
Frame = -3
Query: 746 SVSDDNTMRVWDRXSG---EEVQKVEFQSVPNSXELSRDGAILTVAHGTNVSFYTSDTMR 576
S SDD T+++WD +G EE + + S E G + + Y D R
Sbjct: 185 SGSDDGTVQMWDPRNGGTLEETVRPGGGAAICSVEFDPFGGSSIAVGCADRNAYVYDIRR 244
Query: 575 KLREFPV---PTKCYSASLAPSRATFVCGGDDLKVYKYDYNTGTE-LESNRGHFGPVHCV 408
+ V TK + + T V G D + ++D + G + + RGH + V
Sbjct: 245 LVDPLIVLDGHTKTVTYARFMDSHTIVTGSTDGSLKQWDIDNGRRVVRTYRGHVNSRNFV 304
Query: 407 RWS--PDGELYASGSEDGTV 354
S G L SGSE+ V
Sbjct: 305 GLSVWRHGGLVVSGSENNQV 324
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 431 HFGPVHCVRWSPDGELYASGSEDGTVRLW 345
H G V+ V ++ DG++ SGS+D V LW
Sbjct: 54 HKGCVNTVSFNADGDILLSGSDDRQVILW 82
>At1g08190.1 68414.m00905 vacuolar assembly protein, putative
(VPS41) 99.8% identical to Vacuolar assembly protein
VPS41 homolog (SP:P93043) [Arabidopsis thaliana];
similar to vacuolar assembly protein vps41 GI:1835787
from [Lycopersicon esculentum]
Length = 980
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -3
Query: 458 GTELESNRGHFGPVHCVRWSPDGELYASGSEDGTV 354
G +++ R H PV+ + + +GE S S+DG+V
Sbjct: 88 GNQVKEFRAHTAPVNDINFDTEGEYIGSCSDDGSV 122
>At5g50970.1 68418.m06321 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 512
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -3
Query: 389 ELYASGSEDGTVRLWQAVPGR 327
+L+A+ S DG V LWQ PGR
Sbjct: 210 QLFATSSLDGMVSLWQLQPGR 230
>At4g21520.1 68417.m03110 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to guanine nucleotide-binding protein beta 5
(GI:1001939) [Mesocricetus auratus]
Length = 425
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -3
Query: 410 VRWSPDGELYASGSEDGTVRLW 345
++WSPDG + + SED T+ L+
Sbjct: 57 LKWSPDGSCFLASSEDNTLSLF 78
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 29.9 bits (64), Expect = 1.9
Identities = 41/157 (26%), Positives = 58/157 (36%), Gaps = 21/157 (13%)
Frame = -3
Query: 752 IVSVSDDNTMRVWDRXSGEEVQKVEFQSVPNSXELSRDGAILTVAHGTNVSFYTSDTMRK 573
+ S S D T++ W R + K E S A+ +G V F +SD +
Sbjct: 262 VFSGSADGTVKAWKRDQQGKYTKHTLMQTLTKQE-SAVTALAVSKNGAAVYFGSSDGLVN 320
Query: 572 LREFPVPTKCYSASLAPSRATFVC----------GGDD--LKVYKYDYNTGTELESNRGH 429
E Y L + +C G D + V+K D N T L GH
Sbjct: 321 FWEREKQLN-YGGILKGHKLAVLCLEVAGSLVFSGSADKTICVWKRDGNIHTCLSVLTGH 379
Query: 428 FGPVHCVRWSPDGE---------LYASGSEDGTVRLW 345
GPV C+ D E + SGS D +V++W
Sbjct: 380 TGPVKCLAVEADREASERRDKKWIVYSGSLDKSVKVW 416
>At5g62370.1 68418.m07828 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 982
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +1
Query: 325 ARPGTAC--HSRTVPSSEPDAYSSPSGDHRTQC 417
+R T C S PS+ +S+ SGDHR++C
Sbjct: 14 SRKATTCALSSELFPSTSAAVFSAASGDHRSRC 46
>At3g52190.1 68416.m05731 transducin family protein / WD-40 repeat
family protein similar to St12p protein (GI:166878)
{Arabidopsis thaliana}; contains Pfam profile: PF00400
WD domain, G-beta repeat
Length = 398
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = -3
Query: 548 KCYSASLAPSRATFVCGGDD--LKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYAS 375
KC + S S+ GG D L++ ++ N L+ + H + + +S D E A+
Sbjct: 126 KCMAFSFDGSK--LAVGGVDGCLRIMEWP-NLSVILDEPKAHKS-IRDMDFSLDSEFLAT 181
Query: 374 GSEDGTVRLWQAVPG 330
S DG+ R+W+A G
Sbjct: 182 TSTDGSARIWKAEDG 196
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 29.5 bits (63), Expect = 2.6
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 20/157 (12%)
Frame = -3
Query: 755 RIVSVSDDNTMRVWDRX--SGEEVQKVEFQSVPNSX-ELSRDGAILTVAH-GTNVSFYTS 588
++++ S D T++ WD SG E +V P +S G L VA G +V+ Y
Sbjct: 112 QVITGSWDKTVKCWDPRGASGPERTQVGTYLQPERVYSMSLVGHRLVVATAGRHVNIYDL 171
Query: 587 DTM-----RKLREFPVPTKC---------YSASLAPSRAT--FVCGGDDLKVYKYDYNTG 456
M R+ T+C Y+ S R F + + KY +
Sbjct: 172 RNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEAAQAKKYAFKCH 231
Query: 455 TELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
+ E+ R PV+ + + P +A+G DG V +W
Sbjct: 232 RKSEAGRDIVYPVNSIAFHPIYGTFATGGCDGFVNIW 268
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -3
Query: 497 GDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
G D KV + +N G E + H V CV +S +GS D TV+ W
Sbjct: 76 GADYKVRRIVFNVGKE-DILGTHDKAVRCVEYSYAAGQVITGSWDKTVKCW 125
>At3g13229.1 68416.m01664 hypothetical protein
Length = 289
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -3
Query: 620 AHGTNVSFYTSDTMRKLREFPVPTKCYSASLAPSRATFVCGGD 492
A+GT V Y K FP P+ + SL AT + GD
Sbjct: 74 ANGTRVDVYWDFRQAKFSNFPEPSSGFYVSLVSQNATVLTIGD 116
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = -3
Query: 491 DLKVYKYDYNTGTELESNRGHFGPVHCVRWSP-DGELYASGSEDGTVRLWQAVPGRAYGL 315
D V +D T T L+ H V C+++SP D + SGS D +R+W ++ R
Sbjct: 526 DKTVRLWDIETKTCLKLF-AHNDYVTCIQFSPVDENYFLSGSLDAKIRIW-SIQDRHVVE 583
Query: 314 WRRANETAPLA 282
W +E A
Sbjct: 584 WSDLHEMVTAA 594
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -3
Query: 437 RGHFGPVHCVRWSPDGELYASGSEDGTVRLWQ 342
+ H G V +++S D ASG D + +W+
Sbjct: 401 QAHEGAVWTIKFSQDAHYLASGGADRVIHVWE 432
>At1g76910.1 68414.m08953 hypothetical protein
Length = 139
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -1
Query: 625 LLHTVQTYRFIRRTRCASYASSPCQRSATRHRWLRAGRPSCAA 497
+LH +T I R R + S SA+ +RWL + SC +
Sbjct: 32 MLHWTETVTNIGRCRVSGRGGSELGMSASGNRWLATAKNSCGS 74
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = -3
Query: 437 RGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGRAYGLWR 309
+GH V + GE + SGS D TV LW + GL R
Sbjct: 117 KGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRVEKCQGLLR 159
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = -3
Query: 404 WSPDGELYASGSEDGTVRLWQAVPGRAYGLWRRANETAPL 285
+SP+G SGS DG+ W G+ W P+
Sbjct: 258 FSPEGMFVVSGSGDGSTHAWGVRSGKQVHSWMGLGSEPPV 297
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = -3
Query: 437 RGHFGPVHCVRWSPDGELYASGSEDGTVRLWQAVPGRAYGLWR 309
+GH V + GE + SGS D TV LW + GL R
Sbjct: 114 KGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRVEKCQGLLR 156
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = -3
Query: 404 WSPDGELYASGSEDGTVRLWQAVPGRAYGLWRRANETAPL 285
+SP+G SGS DG+ W G+ W P+
Sbjct: 255 FSPEGMFVVSGSGDGSTHAWGVRSGKQVHSWMGLGSEPPV 294
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = -3
Query: 500 GGDDLKVYKYDYNTGTELE---SNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQ 342
GG D + ++ + G ++ RGH V C+ D + SGS D TVRLW+
Sbjct: 278 GGSDGSILVWERDDGGDIVVVGMLRGHTESVLCLAVVSD--ILCSGSADKTVRLWK 331
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Frame = -3
Query: 434 GHFGPVHCVRWSPD----GELYASGSEDGTVRLW 345
GH GPV C++ SP+ G + SG D ++R+W
Sbjct: 359 GHEGPVKCLQASPNNVGAGFMLYSGGLDKSLRVW 392
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -3
Query: 431 HFGPVHCVRWSPDGELYASGSEDGTVRLW 345
H GPV V + P+G L A+ ++ +++W
Sbjct: 280 HPGPVSSVAFHPNGHLMATSGKERKIKIW 308
>At5g11240.1 68418.m01313 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to uncharacterized protein KIAA0007 (GI:1663708)
{Homo sapiens} 1.2e-11
Length = 615
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = -3
Query: 572 LREFPVPTKCYSA-SLAPSRATFVCGGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSP 396
+R+F TK S+ ++P V LK + + + +++ GH G V CV ++
Sbjct: 151 IRKFKASTKTVSSLCVSPDGKILVTASTQLKTF--NCSDLKKIQKFTGHPGVVRCVAFTE 208
Query: 395 DGE-LYASGSEDGTVRLWQ 342
DG+ + +S + + +W+
Sbjct: 209 DGKYVLSSAVGERYIAVWK 227
>At3g49400.1 68416.m05400 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400); low
similarity (47%) to Agamous-like MADS box protein AGL5
(SP:P29385) {Arabidopsis thaliana}
Length = 892
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = -3
Query: 500 GGDDLKVYKYDYNTGT--ELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
G +V+K + +T ++ S H V + WS DG S S+D VR W
Sbjct: 410 GSGSFEVWKCEISTRKFEQIVSTNAHNQVVTGLAWSYDGRCLYSCSQDNYVRSW 463
>At3g33530.1 68416.m04290 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 11
(SP:Q9BZH6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies, 3
weak)|2763187|gb|T46504.1|T46504
Length = 1345
Score = 28.7 bits (61), Expect = 4.5
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 11/99 (11%)
Frame = -3
Query: 734 DNTMRVWDRXSGEEVQKV----EFQSVPNSXELSRDGAILTVAHGTNVSFYTSDTMRKLR 567
D + +W R GE+V + EF S + ++H + T T+ K+
Sbjct: 312 DGRLSIWRRKEGEQVHVMCTMEEFMPSIGMSIPSPSALAVLLSHSDS----TMQTITKIH 367
Query: 566 -------EFPVPTKCYSASLAPSRATFVCGGDDLKVYKY 471
+F P Y SL S+ TF+ DD K++K+
Sbjct: 368 PDGTSSIDFDNPFDFYDESLLVSKTTFISLSDDGKIWKW 406
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/104 (20%), Positives = 42/104 (40%), Gaps = 4/104 (3%)
Frame = -3
Query: 641 DGAILTVAHGTNVSFYTSDTMRKLREFPVPTKCYSASLAPSRATFVCGGDDLKVYKYDYN 462
DG I +V+ + + + +R +A + T G D ++ +
Sbjct: 205 DGFIYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVSTNGTVYTGSADRRIRVWAKP 264
Query: 461 TG----TELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLWQ 342
TG T + + H V+ + + DG + SGS D ++ +W+
Sbjct: 265 TGEKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWE 308
>At5g01680.1 68418.m00085 cation/hydrogen exchanger, putative
(CHX26) monovalent cation:proton antiporter family 2
(CPA2) member, PMID:11500563
Length = 780
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 134 SVTHALVTKTTHCFYFTKCTILIALLITCSP 226
S H +KTT+ FTK +L+ +++ C P
Sbjct: 225 SFLHQNYSKTTYLPTFTKVLLLVGIVVVCRP 255
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -3
Query: 431 HFGPVHCVRWSPDGELYASGSEDGTVRLW 345
H G V+ V ++ +G++ SGS+D V LW
Sbjct: 58 HKGCVNTVSFNAEGDVLISGSDDRRVVLW 86
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 28.3 bits (60), Expect = 5.9
Identities = 40/150 (26%), Positives = 61/150 (40%), Gaps = 9/150 (6%)
Frame = -3
Query: 752 IVSVSDDNTMRVWDRXSGEEVQKVE-FQSVPNSXELSRDGAILT-VAHGTNVSFYTSDTM 579
+ S S D T +VW V+ V + N+ DG + T A GT + D
Sbjct: 226 LYSGSWDKTFKVWRVSDLRCVESVNAHEDAVNAVVSGFDGLVFTGSADGTVKVWRREDQA 285
Query: 578 RKLREFPVPT----KCYSASLAPSR-ATFV-CGGDDLKVYKYDYNTGTELESN-RGHFGP 420
+ + F T C ++A + AT V CG D V ++ + +GH
Sbjct: 286 KDTKHFFSETLLKQDCAVTAIAVDQSATLVYCGSSDGTVNFWERENNMKNGGVLKGHKLA 345
Query: 419 VHCVRWSPDGELYASGSEDGTVRLWQAVPG 330
V C+ + G L SGS D +R+W+ G
Sbjct: 346 VLCLVAA--GNLMFSGSADLGIRVWRRPEG 373
>At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,
putative 99.8% identical to St12p protein (GI:166878)
{Arabidopsis thaliana}
Length = 393
Score = 28.3 bits (60), Expect = 5.9
Identities = 9/21 (42%), Positives = 19/21 (90%)
Frame = -3
Query: 404 WSPDGELYASGSEDGTVRLWQ 342
++P+G + A+G+EDGT+R+++
Sbjct: 161 FNPEGSVLAAGAEDGTLRVFK 181
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = -3
Query: 500 GGDDLKVYKYDYNTGTELESNRGHFGPVHCVRWSPDGELYASGSEDGTVRLW 345
G D + + G+ L + GH V + +G LY SGS DGTVRLW
Sbjct: 603 GSGDNTIKAWSLQDGSLLCTMSGHKSVVSTLV-VVNGVLY-SGSWDGTVRLW 652
>At4g03830.1 68417.m00534 myosin heavy chain-related
Length = 578
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = -3
Query: 404 WSPDGELYASGSEDGTVRLWQAVPGRAYGLWRRANETAPLANGYKEVPAN*HAC 243
+S DG+ S T R + G A+G+ R N +P A E P+ HAC
Sbjct: 11 YSIDGQFGTYTSSQSTSRRLSLLKG-AHGIPGRINLISPEATDSPETPSPGHAC 63
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 431 HFGPVHCVRWSPDGELYASGSEDGTVRLWQ 342
HF V C+ + D L SGS D T+++W+
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVWR 273
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,743,581
Number of Sequences: 28952
Number of extensions: 331342
Number of successful extensions: 1729
Number of sequences better than 10.0: 187
Number of HSP's better than 10.0 without gapping: 1136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1658
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1702303248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -