Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_A04
(804 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1815.01 |eno101|eno1|enolase|Schizosaccharomyces pombe|chr 2... 264 1e-71
SPBPB21E7.01c |eno102|eno1, SPBPB8B6.07c, eno1|enolase |Schizosa... 235 7e-63
SPAC1039.06 |||alanine racemase |Schizosaccharomyces pombe|chr 1... 29 1.0
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 26 7.2
SPAC1071.01c |pta1|SPAC4H3.15c|mRNA cleavage and polyadenylation... 26 7.2
SPAC644.06c |cdr1|nim1|GIN4 family protein kinase Cdr1|Schizosac... 26 7.2
SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pomb... 26 7.2
SPAC9G1.10c |||inositol polyphosphate phosphatase |Schizosacchar... 25 9.5
>SPBC1815.01 |eno101|eno1|enolase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 439
Score = 264 bits (647), Expect = 1e-71
Identities = 121/191 (63%), Positives = 149/191 (78%)
Frame = -1
Query: 804 YAGKIDIGMDVAAXEFFKDGKYDLDFKNPDSNPGDYLSSEKLADVYLDFIKDFPMVSIED 625
Y GKI IG+DVA+ EF+ DGKYDLD K P + L+ ++L D+Y++ K +P+VSIED
Sbjct: 237 YEGKIKIGLDVASSEFYVDGKYDLDIKAAKPKPENKLTYQQLTDLYVELSKKYPIVSIED 296
Query: 624 PFDQDDWSAWANLTGRTPIQIVGDDLTVTNPKRIATAVEKKACNCLLLKVNQIGSVTESI 445
PFDQDDWSAW ++ T QIVGDDLTVTN KR+ TA++KK N LLLKVNQIGSVTES+
Sbjct: 297 PFDQDDWSAWTHMKAETDFQIVGDDLTVTNVKRLRTAIDKKCANALLLKVNQIGSVTESL 356
Query: 444 DAHLLAKKNGWGTMVSHRSGETEDTFIADLVVGLSTGQIKTGAPCRSERLAKYNQILRIE 265
+A ++ + GWG MVSHRSGET DTFI+ L VG+ GQ+K+GAPCRSERLAKYN++LRIE
Sbjct: 357 NAVRMSYEAGWGVMVSHRSGETADTFISHLTVGIGAGQLKSGAPCRSERLAKYNELLRIE 416
Query: 264 EELGVNAKYAG 232
EELG YAG
Sbjct: 417 EELGSEGVYAG 427
>SPBPB21E7.01c |eno102|eno1, SPBPB8B6.07c, eno1|enolase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 440
Score = 235 bits (574), Expect = 7e-63
Identities = 107/191 (56%), Positives = 144/191 (75%)
Frame = -1
Query: 804 YAGKIDIGMDVAAXEFFKDGKYDLDFKNPDSNPGDYLSSEKLADVYLDFIKDFPMVSIED 625
Y GK+ IG DVAA E + YDLDFK+ P + L +KL + Y I+ +P+V IED
Sbjct: 238 YDGKVKIGFDVAASELYNGKLYDLDFKSEHPKPENKLDYKKLYEKYSALIEKYPIVFIED 297
Query: 624 PFDQDDWSAWANLTGRTPIQIVGDDLTVTNPKRIATAVEKKACNCLLLKVNQIGSVTESI 445
PF ++DW A++ ++ +T ++++ DDLTVTN KR++ A+E K N LL+K+NQIGS++E+I
Sbjct: 298 PFSEEDWGAFSYMSSKTKVEVIADDLTVTNVKRLSKAIELKCANALLVKINQIGSLSETI 357
Query: 444 DAHLLAKKNGWGTMVSHRSGETEDTFIADLVVGLSTGQIKTGAPCRSERLAKYNQILRIE 265
DA +AKK GWG MVSHRSGET+D+FIA L VGL GQ+K+GAPCRSERLAKYN++LRIE
Sbjct: 358 DAANMAKKAGWGLMVSHRSGETDDSFIAHLAVGLEAGQMKSGAPCRSERLAKYNELLRIE 417
Query: 264 EELGVNAKYAG 232
+ LG +A YAG
Sbjct: 418 DNLGDSAIYAG 428
>SPAC1039.06 |||alanine racemase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 415
Score = 28.7 bits (61), Expect = 1.0
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = -1
Query: 525 IATAVEKKACNCLLLKVNQIGSVTESIDAHLLAKKNGWGTMVSHRSGETEDTFIADLVVG 346
I A+ +K CN +L + + IG VT AH+ K GT++ G T+ ++ L+ G
Sbjct: 40 IDEAIFEKNCNRMLDRASDIG-VT--FRAHVKTHKTIEGTLLQLGDGRTKAVVVSTLMEG 96
Query: 345 LS 340
S
Sbjct: 97 FS 98
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1
Query: 741 YDLDFKNPDSNPGDYLSSEKLA 676
YD +NP +P ++LSS+K A
Sbjct: 229 YDFSSENPSIHPSNHLSSQKNA 250
>SPAC1071.01c |pta1|SPAC4H3.15c|mRNA cleavage and polyadenylation
specificity factor complex subunit
Pta1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 122 LY*ISNAYHVLQDCSECAC*MY*IIYFHC 36
LY + N V +D C+C +Y +++ HC
Sbjct: 81 LYAVDNE-EVKKDVISCSCTIYPLVFLHC 108
>SPAC644.06c |cdr1|nim1|GIN4 family protein kinase
Cdr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -3
Query: 346 FVHGS-DQDRRPVSLGASRQVQPN 278
FV GS +Q+RRP+S +QPN
Sbjct: 519 FVQGSGNQNRRPISFPVISNMQPN 542
>SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 2386
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Frame = -1
Query: 756 FKDGKYDLDFKNPDSNPGDYLSSE---KLADVYLD-FIKDFP 643
+++ K DLDF NPGD + K V+ + F++ FP
Sbjct: 2159 YQEIKVDLDFALRSPNPGDIFEKKILPKFPPVFYEWFVESFP 2200
>SPAC9G1.10c |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1191
Score = 25.4 bits (53), Expect = 9.5
Identities = 16/61 (26%), Positives = 26/61 (42%)
Frame = -1
Query: 714 SNPGDYLSSEKLADVYLDFIKDFPMVSIEDPFDQDDWSAWANLTGRTPIQIVGDDLTVTN 535
S LSSE+ + ++ K P + DPF Q + ++ P+ +GD T
Sbjct: 211 SEASSVLSSEEEEENVINSSKSVPSFDLHDPFSQ-TFGKECPISTAPPVLNIGDRSLETP 269
Query: 534 P 532
P
Sbjct: 270 P 270
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,355,279
Number of Sequences: 5004
Number of extensions: 69931
Number of successful extensions: 184
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 184
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 390427050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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