Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_A04
         (804 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68318-8|CAH10783.1|  465|Caenorhabditis elegans Hypothetical pr...   318   2e-87
Z68318-2|CAA92692.1|  434|Caenorhabditis elegans Hypothetical pr...   318   2e-87
Z68318-3|CAD57704.1|  337|Caenorhabditis elegans Hypothetical pr...   316   2e-86
Z93389-6|CAB07669.2|  300|Caenorhabditis elegans Hypothetical pr...    29   3.9  
U97593-6|AAB52879.2|  925|Caenorhabditis elegans Prion-like-(q/n...    29   3.9  
U97593-5|AAB52880.1| 1175|Caenorhabditis elegans Prion-like-(q/n...    29   3.9  

>Z68318-8|CAH10783.1|  465|Caenorhabditis elegans Hypothetical
           protein T21B10.2c protein.
          Length = 465

 Score =  318 bits (782), Expect = 2e-87
 Identities = 147/193 (76%), Positives = 165/193 (85%)
 Frame = -1

Query: 804 YAGKIDIGMDVAAXEFFKDGKYDLDFKNPDSNPGDYLSSEKLADVYLDFIKDFPMVSIED 625
           Y GKI IGMDVAA EFFKDGKYDLDFKNP S+   +LS E+L ++Y  FIK++P+VSIED
Sbjct: 267 YTGKISIGMDVAASEFFKDGKYDLDFKNPASDSSKWLSGEQLTELYQSFIKEYPVVSIED 326

Query: 624 PFDQDDWSAWANLTGRTPIQIVGDDLTVTNPKRIATAVEKKACNCLLLKVNQIGSVTESI 445
            FDQDDW  W    G T IQ+VGDDLTVTNPKRI TA++KK+CNCLLLKVNQIGSVTESI
Sbjct: 327 AFDQDDWDNWGKFHGATSIQLVGDDLTVTNPKRIQTAIDKKSCNCLLLKVNQIGSVTESI 386

Query: 444 DAHLLAKKNGWGTMVSHRSGETEDTFIADLVVGLSTGQIKTGAPCRSERLAKYNQILRIE 265
           +A  L++ NGWG MVSHRSGETEDTFIADLVVGL+TGQIKTGAPCRSERLAKYNQ+LRIE
Sbjct: 387 EAAKLSRANGWGVMVSHRSGETEDTFIADLVVGLATGQIKTGAPCRSERLAKYNQLLRIE 446

Query: 264 EELGVNAKYAGKN 226
           EELG +A YAG N
Sbjct: 447 EELGADAVYAGHN 459


>Z68318-2|CAA92692.1|  434|Caenorhabditis elegans Hypothetical
           protein T21B10.2a protein.
          Length = 434

 Score =  318 bits (782), Expect = 2e-87
 Identities = 147/193 (76%), Positives = 165/193 (85%)
 Frame = -1

Query: 804 YAGKIDIGMDVAAXEFFKDGKYDLDFKNPDSNPGDYLSSEKLADVYLDFIKDFPMVSIED 625
           Y GKI IGMDVAA EFFKDGKYDLDFKNP S+   +LS E+L ++Y  FIK++P+VSIED
Sbjct: 236 YTGKISIGMDVAASEFFKDGKYDLDFKNPASDSSKWLSGEQLTELYQSFIKEYPVVSIED 295

Query: 624 PFDQDDWSAWANLTGRTPIQIVGDDLTVTNPKRIATAVEKKACNCLLLKVNQIGSVTESI 445
            FDQDDW  W    G T IQ+VGDDLTVTNPKRI TA++KK+CNCLLLKVNQIGSVTESI
Sbjct: 296 AFDQDDWDNWGKFHGATSIQLVGDDLTVTNPKRIQTAIDKKSCNCLLLKVNQIGSVTESI 355

Query: 444 DAHLLAKKNGWGTMVSHRSGETEDTFIADLVVGLSTGQIKTGAPCRSERLAKYNQILRIE 265
           +A  L++ NGWG MVSHRSGETEDTFIADLVVGL+TGQIKTGAPCRSERLAKYNQ+LRIE
Sbjct: 356 EAAKLSRANGWGVMVSHRSGETEDTFIADLVVGLATGQIKTGAPCRSERLAKYNQLLRIE 415

Query: 264 EELGVNAKYAGKN 226
           EELG +A YAG N
Sbjct: 416 EELGADAVYAGHN 428


>Z68318-3|CAD57704.1|  337|Caenorhabditis elegans Hypothetical
           protein T21B10.2b protein.
          Length = 337

 Score =  316 bits (775), Expect = 2e-86
 Identities = 146/191 (76%), Positives = 164/191 (85%)
 Frame = -1

Query: 798 GKIDIGMDVAAXEFFKDGKYDLDFKNPDSNPGDYLSSEKLADVYLDFIKDFPMVSIEDPF 619
           GKI IGMDVAA EFFKDGKYDLDFKNP S+   +LS E+L ++Y  FIK++P+VSIED F
Sbjct: 141 GKISIGMDVAASEFFKDGKYDLDFKNPASDSSKWLSGEQLTELYQSFIKEYPVVSIEDAF 200

Query: 618 DQDDWSAWANLTGRTPIQIVGDDLTVTNPKRIATAVEKKACNCLLLKVNQIGSVTESIDA 439
           DQDDW  W    G T IQ+VGDDLTVTNPKRI TA++KK+CNCLLLKVNQIGSVTESI+A
Sbjct: 201 DQDDWDNWGKFHGATSIQLVGDDLTVTNPKRIQTAIDKKSCNCLLLKVNQIGSVTESIEA 260

Query: 438 HLLAKKNGWGTMVSHRSGETEDTFIADLVVGLSTGQIKTGAPCRSERLAKYNQILRIEEE 259
             L++ NGWG MVSHRSGETEDTFIADLVVGL+TGQIKTGAPCRSERLAKYNQ+LRIEEE
Sbjct: 261 AKLSRANGWGVMVSHRSGETEDTFIADLVVGLATGQIKTGAPCRSERLAKYNQLLRIEEE 320

Query: 258 LGVNAKYAGKN 226
           LG +A YAG N
Sbjct: 321 LGADAVYAGHN 331


>Z93389-6|CAB07669.2|  300|Caenorhabditis elegans Hypothetical
           protein T13F3.5 protein.
          Length = 300

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = -1

Query: 573 PIQIVGDDLTVTNPKRIATAVEKKACNCLLLKVNQIGSVTESIDAHLLAKK 421
           P+++    L    P  I     +K C CL   V+++G+   SI  H+L+++
Sbjct: 14  PLEVANQILEKLEP--IYQLTSRKVCKCLKTSVDKLGTHFYSITFHILSRE 62


>U97593-6|AAB52879.2|  925|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
           isoform c protein.
          Length = 925

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +1

Query: 118 YKHSQDYFFCWNQNADNLKTQNFTF 192
           +KH Q     W Q ADN+ TQN+T+
Sbjct: 408 HKHQQ-----WQQQADNMNTQNYTY 427


>U97593-5|AAB52880.1| 1175|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
           isoform a protein.
          Length = 1175

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +1

Query: 118 YKHSQDYFFCWNQNADNLKTQNFTF 192
           +KH Q     W Q ADN+ TQN+T+
Sbjct: 573 HKHQQ-----WQQQADNMNTQNYTY 592


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,679,404
Number of Sequences: 27780
Number of extensions: 404771
Number of successful extensions: 987
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 987
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)