Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_A03
(833 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 66 4e-12
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 56 6e-09
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 52 8e-08
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 50 5e-07
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 43 6e-05
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 40 6e-04
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 31 0.20
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 29 0.61
SPAC22F3.04 |mug62||AMP binding enzyme |Schizosaccharomyces pomb... 27 2.5
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 26 5.7
SPAC1786.03 |cut11|SPAC24C9.01|integral membrane nucleoporin|Sch... 26 7.6
SPAC22H10.03c |kap114||karyopherin Kap14|Schizosaccharomyces pom... 26 7.6
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 66.5 bits (155), Expect = 4e-12
Identities = 31/75 (41%), Positives = 43/75 (57%)
Frame = -2
Query: 808 DXLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFV 629
D LVV+DF ATWCGPCK I PK ++ + IA+E +++MP+F
Sbjct: 18 DKLVVVDFFATWCGPCKAIAPKFEQF-SNTYSDATFIKVDVDQLSEIAAEAGVHAMPSFF 76
Query: 628 FVKNGKKLDEFSGAN 584
KNG+K++E GAN
Sbjct: 77 LYKNGEKIEEIVGAN 91
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 56.0 bits (129), Expect = 6e-09
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = -2
Query: 799 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXI-ASEYNINSMPTFVFV 623
+ +D A WCGPCK I P ++A++ AS + +MPTFVF
Sbjct: 22 LAVDCYADWCGPCKAISPLFSQLASKYASPKFVFAKVNVDEQRQIASGLGVKAMPTFVFF 81
Query: 622 KNGKKLDEFSGAN 584
+NGK++D +GAN
Sbjct: 82 ENGKQIDMLTGAN 94
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 52.4 bits (120), Expect = 8e-08
Identities = 25/78 (32%), Positives = 41/78 (52%)
Frame = -2
Query: 814 AGDXLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPT 635
+ D + V+DF A WCGPCK + P L+++ +E IA + + ++PT
Sbjct: 33 SADKVTVVDFYADWCGPCKYLKPFLEKL-SEQNQKASFIAVNADKFSDIAQKNGVYALPT 91
Query: 634 FVFVKNGKKLDEFSGANV 581
V + G++LD GA+V
Sbjct: 92 MVLFRKGQELDRIVGADV 109
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 49.6 bits (113), Expect = 5e-07
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = -2
Query: 808 DXLVVIDFMATWCGPCKMIGPKLDEIAAEM-XXXXXXXXXXXXXXXXIASEYNINSMPTF 632
D ++++ F A WCG CK + P+ + A E+ + SEY+I PT
Sbjct: 39 DKVLMVKFYAPWCGHCKALAPEYESAADELEKDGISLVEVDCTEEGDLCSEYSIRGYPTL 98
Query: 631 VFVKNGKKLDEFSG 590
KNGK++ ++SG
Sbjct: 99 NVFKNGKQISQYSG 112
Score = 36.3 bits (80), Expect = 0.005
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = -2
Query: 799 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVK 620
V+++F A WCG CK + P +++A E S +I+ PT +F K
Sbjct: 376 VLVEFYAPWCGHCKNLAPTYEKLAEEYSDDSNVVVAKIDATENDIS-VSISGFPTIMFFK 434
Query: 619 NGKKLD 602
K++
Sbjct: 435 ANDKVN 440
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 42.7 bits (96), Expect = 6e-05
Identities = 21/80 (26%), Positives = 36/80 (45%)
Frame = -2
Query: 823 LAEAGDXLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINS 644
L + +++++F A W PCK + D+ A + IA +++N+
Sbjct: 15 LQNGKEQIILLNFYAPWAAPCKQMNQVFDQFAKD-TKNAVFLKIEAEKFSDIAESFDVNA 73
Query: 643 MPTFVFVKNGKKLDEFSGAN 584
+P FV + K L SGAN
Sbjct: 74 VPLFVLIHGAKVLARISGAN 93
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 39.5 bits (88), Expect = 6e-04
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = -2
Query: 796 VIDFMATWCGPCKMIGPKLDEIAA--EMXXXXXXXXXXXXXXXXIASEYNINSMPTFV-F 626
+I+F ATWCG CK + P +E+ A E +A +Y+I PT + F
Sbjct: 43 LIEFYATWCGHCKSLAPVYEELGALFEDHNDVLIGKIDADTHSDVADKYHITGFPTLIWF 102
Query: 625 VKNGKKLDEFSGA 587
+G + ++S A
Sbjct: 103 PPDGSEPVQYSNA 115
Score = 29.9 bits (64), Expect = 0.47
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -2
Query: 799 VVIDFMATWCGPCKMIGPKLDEI 731
V+++F A WCG CK + P + +
Sbjct: 161 VLVEFYADWCGYCKRLAPTYETL 183
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 31.1 bits (67), Expect = 0.20
Identities = 21/78 (26%), Positives = 29/78 (37%), Gaps = 2/78 (2%)
Frame = -2
Query: 811 GDXLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIA--SEYNINSMP 638
G LVV F A WCG CK + P ++A+ + A S+Y + P
Sbjct: 49 GPSLVV--FYAPWCGYCKKLVPTYQKLASNLHSLLPVTAVDCDADQNRAVCSQYQVQGFP 106
Query: 637 TFVFVKNGKKLDEFSGAN 584
T V K S +
Sbjct: 107 TIKLVYPSSKGSSLSSTD 124
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 29.5 bits (63), Expect = 0.61
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = -2
Query: 772 CGPCKMIGPKLD---EIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNGKKLD 602
CG CK +GP D E A E ++S NI ++PT +NG+ ++
Sbjct: 54 CGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSKELSSCANIRAVPTLYLYQNGEIVE 113
Query: 601 E 599
E
Sbjct: 114 E 114
>SPAC22F3.04 |mug62||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1428
Score = 27.5 bits (58), Expect = 2.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 197 IGEIIHLSKPDKNKNKNITIHTLKFLSNHL 286
+G I HL K D+N K ++TL F+ N L
Sbjct: 1251 LGFIHHLKKKDQNMEKVPVLYTLDFIWNTL 1280
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 26.2 bits (55), Expect = 5.7
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 161 KHDGNLSYTLISIGEIIHLSKPDKNKNKNITIHTL 265
K DG+ S GE++H + ++ KN+ + I+ L
Sbjct: 301 KLDGSFMEVKRSAGEVVHPGETERVKNQGMPIYNL 335
>SPAC1786.03 |cut11|SPAC24C9.01|integral membrane
nucleoporin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 25.8 bits (54), Expect = 7.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 424 SSNSLQTLKTFFIYLLKTYTCFFFKF 501
SS +L +F+ L++ + CFFF F
Sbjct: 50 SSGPFISLSFWFLSLVRGFVCFFFMF 75
>SPAC22H10.03c |kap114||karyopherin Kap14|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 986
Score = 25.8 bits (54), Expect = 7.6
Identities = 23/86 (26%), Positives = 38/86 (44%)
Frame = +3
Query: 348 YLLNCLITTEPIFFAFQRLQTQKINIFKFITDVKNIFYLFIKNVYMFFF*IPFSFHRRLR 527
+ L + E AF+ L T + F + ++ KNI + I ++ F P +++
Sbjct: 795 HFLTSSLLNEQGLTAFEVLMTVWCDNFVYFSNFKNISIICIAMTKIYSFDSPLLDSVQVK 854
Query: 528 TTLVSIYLCLRIVVLSLSTLAPENSS 605
L+S RI+ S S L PE S
Sbjct: 855 GELIS--HSNRIITRSQSKLHPEEYS 878
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,951,416
Number of Sequences: 5004
Number of extensions: 56154
Number of successful extensions: 152
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 147
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 410448950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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