Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_A03
(833 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 60 3e-09
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 60 3e-09
SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 49 4e-06
SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 42 6e-04
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 42 6e-04
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 41 0.001
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 41 0.001
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 36 0.041
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 36 0.054
SB_13486| Best HMM Match : DUF1530 (HMM E-Value=2.3) 32 0.66
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 31 0.87
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_21263| Best HMM Match : Thioredoxin (HMM E-Value=0.00093) 29 4.6
SB_6126| Best HMM Match : Thioredoxin (HMM E-Value=0.021) 28 8.1
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 59.7 bits (138), Expect = 3e-09
Identities = 31/80 (38%), Positives = 41/80 (51%)
Frame = -2
Query: 823 LAEAGDXLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINS 644
L AG LVV DF A+WCGPCK I P + +E +A++ + +
Sbjct: 22 LTNAGTKLVVADFTASWCGPCKSIAPVYSGL-SEKYKQAVFLKIDVDVCQELAAKQGVTA 80
Query: 643 MPTFVFVKNGKKLDEFSGAN 584
MPTF F KN K+DE GA+
Sbjct: 81 MPTFQFFKNKVKVDEVRGAD 100
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 59.7 bits (138), Expect = 3e-09
Identities = 31/80 (38%), Positives = 38/80 (47%)
Frame = -2
Query: 823 LAEAGDXLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINS 644
+ AG LVVIDF ATWCGPCK I P ++ + A I +
Sbjct: 23 IERAGSRLVVIDFTATWCGPCKSIAPVFTNLSMKF-MDVVFLKVDVDQCQLTAESCGIRA 81
Query: 643 MPTFVFVKNGKKLDEFSGAN 584
MPTF F N K+DE GA+
Sbjct: 82 MPTFHFYHNKAKIDELRGAD 101
>SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = -2
Query: 775 WCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNGKKLDEF 596
WC PCK++ P+LD I AE +A + +N++PT + +K GK +++F
Sbjct: 2 WCNPCKVLTPRLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGKVINKF 61
Query: 595 SG 590
G
Sbjct: 62 EG 63
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 49.2 bits (112), Expect = 4e-06
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = -2
Query: 802 LVVIDFMATWCGPCKMIGPKLDEIAAE 722
+ IDF ATWCGPC+MIGPK +E+A E
Sbjct: 13 VAAIDFTATWCGPCRMIGPKFEEMAKE 39
>SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = -2
Query: 781 ATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNGKKLD 602
A WC PCK++ P+LD I AE +A + +N++PT + +K GK ++
Sbjct: 46 ACWCNPCKVLTPRLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGKVME 105
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 45.2 bits (102), Expect = 7e-05
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = -2
Query: 808 DXLVVIDFMATWCGPCKMIGPKLDEIAAE 722
D LVVIDF A WCGPC+ I PK ++A E
Sbjct: 30 DKLVVIDFYAEWCGPCRQIKPKFKKMALE 58
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 44.0 bits (99), Expect = 2e-04
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = -2
Query: 814 AGDXLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPT 635
A + V+DF A WCGPC PK +++A + + SE NI+S PT
Sbjct: 449 ASEDAWVVDFYAPWCGPCMRFAPKYEQLAKMLKGKVRAAKVNCEQDYGLCSEANIHSYPT 508
Score = 32.3 bits (70), Expect = 0.50
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Frame = -2
Query: 793 IDFMATWCGPCKMIGPKLDEIAAE-MXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKN 617
+DF A WC PC + P+ + A + + +YNI S PT + N
Sbjct: 307 VDFFAPWCPPCMRLLPEYRKAARSFVGKPVGFGTVDCTVHSQLCHQYNIRSYPTTILYNN 366
Query: 616 GK 611
+
Sbjct: 367 SQ 368
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 41.9 bits (94), Expect = 6e-04
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Frame = -2
Query: 802 LVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTF-VF 626
L +++F A WCG C+ + P+ + A E+ AS Y + PT VF
Sbjct: 99 LWLVEFFAPWCGHCQRLAPEWAKAATELKGKVKVGALDATVHTVTASRYQVQGYPTIKVF 158
Query: 625 ---VKNGKKLDEFSG 590
+KN ++++ G
Sbjct: 159 AAGIKNSHSVEDYQG 173
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 8/80 (10%)
Frame = -2
Query: 799 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXX--------XXXXXXXXXIASEYNINS 644
V++DF A WC CK + P ++A E+ +YN+
Sbjct: 154 VLVDFYAPWCFHCKKMAPDYKDVAKELLILSHNSVRLAKVDCSANNMATKKTCKKYNVKF 213
Query: 643 MPTFVFVKNGKKLDEFSGAN 584
+PT +GK ++EF G N
Sbjct: 214 LPTIYLFHDGKFVEEFEGNN 233
Score = 31.5 bits (68), Expect = 0.87
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -2
Query: 799 VVIDFMATWCGPCKMIGPKLDEIAAEM 719
V++DF A WC C+ + P D A ++
Sbjct: 71 VLVDFYAPWCSDCQRLSPLFDTAALQL 97
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Frame = -2
Query: 823 LAEAGDXLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINS 644
+A D V ++F A WCG CK + P D++ + ++S
Sbjct: 397 VARNKDKNVFVEFYAPWCGHCKQLAPIWDQLGEKYKDHADIVVAKMDSTANEVEGVKVHS 456
Query: 643 MPTF-VFVKNGKKLDEFSGANVD 578
PT F K G+ +D G +D
Sbjct: 457 FPTIKYFPKEGEAVDYNGGRTLD 479
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = -2
Query: 820 AEAGDXLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXX---XXXXXXXXXXXIASEYNI 650
A A + V+++F A WCG CK + P+ + A ++ + ++ +
Sbjct: 37 AVAANKHVLVEFYAPWCGHCKALAPEYAKAAGQLKSEKSEIKLAKVDATAETKLGEKFQV 96
Query: 649 NSMPTFVFVKNGKKLDEFSG 590
PT F K+GK E++G
Sbjct: 97 QGYPTIKFFKDGKP-SEYAG 115
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Frame = -2
Query: 814 AGDXLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXX----XXXXXXXXXXXXIASEYNIN 647
AG +++++F A WCG CK + P+ + A + S+Y ++
Sbjct: 553 AGKDIMLVEFFAPWCGHCKRLAPEYETAAEALKKNDPPVPLAKVDCTEAGKDTCSKYGVS 612
Query: 646 SMPTFVFVKNGKKLDEFSG 590
PT +NG+ ++ G
Sbjct: 613 GYPTLKIFRNGEMSKDYDG 631
Score = 35.1 bits (77), Expect = 0.071
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -2
Query: 799 VVIDFMATWCGPCKMIGPKLDEIAAEM 719
V+I+F A WCG CK + PK +E+ ++
Sbjct: 883 VLIEFYAPWCGHCKSLEPKYNELGEKL 909
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = -2
Query: 808 DXLVVIDFMATWCGPCKMIGPKLDEIAAEMXXX---XXXXXXXXXXXXXIASEYNINSMP 638
+ L++++F A WCG CK + P+ ++ A E+ +A +Y + P
Sbjct: 193 ESLMLVEFFAPWCGHCKQLAPEYEKAAQELQKHDPPIPLAIVDATIESELAQKYEVQGYP 252
Query: 637 TFVFVKNGKKLDEFSG 590
T + G K E+ G
Sbjct: 253 TLKVFRKG-KATEYKG 267
Score = 33.1 bits (72), Expect = 0.29
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -2
Query: 802 LVVIDFMATWCGPCKMIGPKLDEIAAEM 719
+++++F A WCG CK + P+ + A +M
Sbjct: 80 IILVEFYAPWCGHCKSLAPEYAKAAKKM 107
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 35.9 bits (79), Expect = 0.041
Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Frame = -2
Query: 811 GDXLVVIDFMATWCGPCKMIGPKLDEI--AAEMXXXXXXXXXXXXXXXXIASEYNINSMP 638
G+ +++F A WCG CK + P +++ A + S +++ P
Sbjct: 38 GEKFALVEFYAPWCGHCKQLAPTYEQLGEAYTQSSDVIIAKVDADGDRDLGSRFDVKGFP 97
Query: 637 TF-VFVKNGKKLDEFSG 590
T F K +E++G
Sbjct: 98 TIKYFPKGSTTPEEYNG 114
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 35.5 bits (78), Expect = 0.054
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -2
Query: 814 AGDXLVVIDFMATWCGPCKMIGPKLDEIAAE 722
AG +++++F A WCG CK + P+ E AAE
Sbjct: 28 AGKDIMLVEFFAPWCGHCKRLAPEY-ETAAE 57
>SB_13486| Best HMM Match : DUF1530 (HMM E-Value=2.3)
Length = 222
Score = 31.9 bits (69), Expect = 0.66
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -2
Query: 823 LAEAGDXLVVIDFMATWCGPCKMIGP 746
L E+ + +IDF A+WC PC++ P
Sbjct: 172 LKESMGKVTIIDFWASWCQPCRVENP 197
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 31.5 bits (68), Expect = 0.87
Identities = 19/75 (25%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Frame = -2
Query: 799 VVIDFMATWCGPCKMIGPKLDEIAAEMXX--XXXXXXXXXXXXXXIASEYNINSMPTFVF 626
V++ F A WCG CK PK ++ A + + +N PT +
Sbjct: 167 VLVMFYAPWCGHCKNAKPKYEKAAETFKDQPNRVFAKLDCTKFGDVCDKEEVNGYPTLRY 226
Query: 625 VKNGKKLDEFSGANV 581
GK + E+ G V
Sbjct: 227 YLYGKFVVEYDGDRV 241
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 30.3 bits (65), Expect = 2.0
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -2
Query: 802 LVVIDFMATWCGPCKMIGPKLDEIAAEM 719
++++DF A WC C + PK ++ A ++
Sbjct: 41 VMLVDFYAPWCSDCDNLRPKYEKAARDL 68
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 4/79 (5%)
Frame = -2
Query: 802 LVVIDFMATWCGPCKMIGPKLD----EIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPT 635
++++DF A WC C+ + P+L+ +AA+ + + I P+
Sbjct: 39 IMLVDFYAPWCHHCQELLPQLEGAANALAAKGLFQFAKVDCTDPRSKVLCDNFKIEGYPS 98
Query: 634 FVFVKNGKKLDEFSGANVD 578
K GK ++ G D
Sbjct: 99 VKLFKFGKYAGDYIGQRTD 117
>SB_21263| Best HMM Match : Thioredoxin (HMM E-Value=0.00093)
Length = 148
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Frame = -2
Query: 832 KTRLAEAGDXL----VVIDFMATWCGPCKMIGPKLDEIAAEM 719
K L +AG+ + + + F A WC PC+ P L + E+
Sbjct: 13 KGELVDAGEAVKGKVIAVYFSAHWCPPCRQFTPILKDFYEEL 54
>SB_6126| Best HMM Match : Thioredoxin (HMM E-Value=0.021)
Length = 293
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 802 LVVIDFMATWCGPCKMIGPKLDEIAAE 722
+V I F A+WC PC+ P L + E
Sbjct: 156 VVAIYFSASWCPPCQKFTPLLKDFYEE 182
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,213,478
Number of Sequences: 59808
Number of extensions: 379960
Number of successful extensions: 863
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2347493764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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