Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_A01
(457 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4KTB1 Cluster: S30-ubiquitin-like; n=4; Metazoa|Rep: S... 80 3e-14
UniRef50_UPI0000F33F66 Cluster: UPI0000F33F66 related cluster; n... 60 2e-08
UniRef50_Q18231 Cluster: Ribosomal protein, small subunit protei... 58 1e-07
UniRef50_P62861 Cluster: 40S ribosomal protein S30; n=74; root|R... 55 6e-07
UniRef50_Q9W6Y0 Cluster: 40S ribosomal protein S30; n=30; Eukary... 53 3e-06
UniRef50_P49689 Cluster: 40S ribosomal protein S30; n=4; Magnoli... 51 1e-05
UniRef50_O42952 Cluster: 40S ribosomal protein S30; n=37; Eukary... 49 4e-05
UniRef50_A1DL63 Cluster: Ribosomal S30/ubiquitin fusion; n=2; Tr... 48 1e-04
UniRef50_Q4Q7P0 Cluster: 40S ribosomal protein S30, putative; n=... 48 1e-04
UniRef50_UPI0000EB4B7C Cluster: UPI0000EB4B7C related cluster; n... 43 0.004
UniRef50_UPI0000EB013B Cluster: UPI0000EB013B related cluster; n... 40 0.019
UniRef50_A0CN43 Cluster: Chromosome undetermined scaffold_22, wh... 40 0.019
UniRef50_Q3LW43 Cluster: Ribosomal protein S30; n=1; Bigelowiell... 39 0.059
UniRef50_UPI0001509BA5 Cluster: Ribosomal protein S30 containing... 38 0.077
UniRef50_UPI00004990C9 Cluster: 40S ribosomal protein S30; n=2; ... 35 0.95
UniRef50_A6NDN8 Cluster: Uncharacterized protein ENSP00000310146... 35 0.95
UniRef50_UPI00005A3817 Cluster: PREDICTED: similar to UBIQUITIN-... 34 1.3
UniRef50_Q7XUY7 Cluster: OSJNBb0048E02.10 protein; n=3; Oryza sa... 34 1.3
UniRef50_A0RV16 Cluster: Ribosomal protein S30E; n=2; Thermoprot... 34 1.3
UniRef50_Q8ZV51 Cluster: Ribosomal protein S30; n=11; Thermoprot... 32 5.1
>UniRef50_Q4KTB1 Cluster: S30-ubiquitin-like; n=4; Metazoa|Rep:
S30-ubiquitin-like - Suberites domuncula (Sponge)
Length = 134
Score = 79.8 bits (188), Expect = 3e-14
Identities = 45/114 (39%), Positives = 63/114 (55%), Gaps = 2/114 (1%)
Frame = -2
Query: 408 MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXX-- 235
MQ+ ++G + H ++V+ + + Q+K + + ED LS G P
Sbjct: 1 MQVFVQGGALHAINVSEETTFNQLKSELVLSEGITVEDQVLSYGGVPLEDDTLVCEIVPE 60
Query: 234 XXXXXLTVPLLGGKVHGSLARAGKVKGQTPKVEXXXXXXXKTGRAKRRIQVQQK 73
L V ++GGKVHGSLARAGKV+GQTPKVE KTGRAKRR+Q ++
Sbjct: 61 LATLSLAVRVVGGKVHGSLARAGKVRGQTPKVEAQEKKKKKTGRAKRRMQYNRR 114
Score = 45.6 bits (103), Expect = 5e-04
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = -3
Query: 86 KYNRRFVNVVQTFGRRRGPNSNS 18
+YNRRFVNVV FGRRRGPNSN+
Sbjct: 110 QYNRRFVNVVAQFGRRRGPNSNA 132
>UniRef50_UPI0000F33F66 Cluster: UPI0000F33F66 related cluster; n=3;
Laurasiatheria|Rep: UPI0000F33F66 UniRef100 entry - Bos
Taurus
Length = 128
Score = 60.5 bits (140), Expect = 2e-08
Identities = 40/105 (38%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Frame = -2
Query: 399 HIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXX---XXXX 229
H + Q H L V GQE + QIK + +L +D L L G P
Sbjct: 4 HAQSQELHTLKVTGQEMVAQIKAHVASLEG---KDQVLLLAGTPLEDEVTLGQCEVEALS 60
Query: 228 XXXLTVPLLGGKVHGSLARAGKVKGQTPKVEXXXXXXXKTGRAKR 94
+ +LGGKVHGSL AGKV+GQTPKV+ + G+AKR
Sbjct: 61 TLEVVGRMLGGKVHGSLDCAGKVRGQTPKVD--KESKRRWGQAKR 103
>UniRef50_Q18231 Cluster: Ribosomal protein, small subunit protein
30; n=3; Caenorhabditis|Rep: Ribosomal protein, small
subunit protein 30 - Caenorhabditis elegans
Length = 130
Score = 57.6 bits (133), Expect = 1e-07
Identities = 43/118 (36%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
Frame = -2
Query: 408 MQLHIRG--QSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXX 235
MQ+ + G +TH LDV+ ++ IK I E+ ++S G+
Sbjct: 1 MQIFLLGLDNTTHTLDVDASTTLSAIKGVIGA-----GEEFSISY-GSKVLSEELTLGEC 54
Query: 234 XXXXXLTVP----LLGGKVHGSLARAGKVKGQTPKVEXXXXXXXKTGRAKRRIQVQQK 73
T+ LLGGKVHGSLARAGKV+ QTPKV+ K GRA RR+Q ++
Sbjct: 55 QIESLSTLSVNGRLLGGKVHGSLARAGKVRAQTPKVDKQDKKKKKRGRAFRRVQYTRR 112
Score = 35.1 bits (77), Expect = 0.72
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -3
Query: 86 KYNRRFVNVVQTFGRRRGPNSNS 18
+Y RR+VNV G++RGPNSNS
Sbjct: 108 QYTRRYVNVASGPGKKRGPNSNS 130
>UniRef50_P62861 Cluster: 40S ribosomal protein S30; n=74; root|Rep:
40S ribosomal protein S30 - Homo sapiens (Human)
Length = 59
Score = 55.2 bits (127), Expect = 6e-07
Identities = 27/41 (65%), Positives = 31/41 (75%)
Frame = -2
Query: 195 KVHGSLARAGKVKGQTPKVEXXXXXXXKTGRAKRRIQVQQK 73
KVHGSLARAGKV+GQTPKV KTGRAKRR+Q ++
Sbjct: 1 KVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRR 41
Score = 44.4 bits (100), Expect = 0.001
Identities = 17/23 (73%), Positives = 22/23 (95%)
Frame = -3
Query: 86 KYNRRFVNVVQTFGRRRGPNSNS 18
+YNRRFVNVV TFG+++GPN+NS
Sbjct: 37 QYNRRFVNVVPTFGKKKGPNANS 59
>UniRef50_Q9W6Y0 Cluster: 40S ribosomal protein S30; n=30;
Eukaryota|Rep: 40S ribosomal protein S30 - Oryzias
latipes (Medaka fish) (Japanese ricefish)
Length = 59
Score = 53.2 bits (122), Expect = 3e-06
Identities = 25/41 (60%), Positives = 30/41 (73%)
Frame = -2
Query: 195 KVHGSLARAGKVKGQTPKVEXXXXXXXKTGRAKRRIQVQQK 73
KVHGSLARAGKV+GQTP V+ + GRAKRRIQ ++
Sbjct: 1 KVHGSLARAGKVRGQTPNVDKHEEKEEEDGRAKRRIQYNRR 41
Score = 41.1 bits (92), Expect = 0.011
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = -3
Query: 86 KYNRRFVNVVQTFGRRRGPNSNS 18
+YNRRFVNVV TFG+++G N+NS
Sbjct: 37 QYNRRFVNVVPTFGKKKGANANS 59
>UniRef50_P49689 Cluster: 40S ribosomal protein S30; n=4;
Magnoliophyta|Rep: 40S ribosomal protein S30 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 62
Score = 50.8 bits (116), Expect = 1e-05
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = -2
Query: 198 GKVHGSLARAGKVKGQTPKVEXXXXXXXKTGRAKRRIQ 85
GKVHGSLARAGKV+GQTPKV GRA +R+Q
Sbjct: 2 GKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRLQ 39
Score = 33.9 bits (74), Expect = 1.7
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = -3
Query: 86 KYNRRFVNVVQTFGRRRGPNSN 21
++NRRFV V FG++RGPNS+
Sbjct: 39 QHNRRFVTAVVGFGKKRGPNSS 60
>UniRef50_O42952 Cluster: 40S ribosomal protein S30; n=37;
Eukaryota|Rep: 40S ribosomal protein S30 -
Schizosaccharomyces pombe (Fission yeast)
Length = 61
Score = 49.2 bits (112), Expect = 4e-05
Identities = 24/37 (64%), Positives = 26/37 (70%)
Frame = -2
Query: 198 GKVHGSLARAGKVKGQTPKVEXXXXXXXKTGRAKRRI 88
GKVHGSLARAGKVK QTPKVE GRA +R+
Sbjct: 2 GKVHGSLARAGKVKSQTPKVEKQEKPKQPKGRAYKRL 38
>UniRef50_A1DL63 Cluster: Ribosomal S30/ubiquitin fusion; n=2;
Trichocomaceae|Rep: Ribosomal S30/ubiquitin fusion -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 78
Score = 48.0 bits (109), Expect = 1e-04
Identities = 23/42 (54%), Positives = 28/42 (66%)
Frame = -2
Query: 198 GKVHGSLARAGKVKGQTPKVEXXXXXXXKTGRAKRRIQVQQK 73
GKVHGSLARAGKVK TPKVE GRA +R++ ++
Sbjct: 2 GKVHGSLARAGKVKSATPKVEKQEKKKEPKGRALKRLKYTRR 43
>UniRef50_Q4Q7P0 Cluster: 40S ribosomal protein S30, putative; n=4;
Leishmania|Rep: 40S ribosomal protein S30, putative -
Leishmania major
Length = 66
Score = 47.6 bits (108), Expect = 1e-04
Identities = 22/46 (47%), Positives = 29/46 (63%)
Frame = -2
Query: 198 GKVHGSLARAGKVKGQTPKVEXXXXXXXKTGRAKRRIQVQQKICQR 61
GK+HGSLARAGKVK QTPKV GRA +R++ ++ +
Sbjct: 2 GKIHGSLARAGKVKNQTPKVAKQEKPKQPRGRALKRLKYTRRFLSK 47
>UniRef50_UPI0000EB4B7C Cluster: UPI0000EB4B7C related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB4B7C UniRef100
entry - Canis familiaris
Length = 104
Score = 42.7 bits (96), Expect = 0.004
Identities = 35/98 (35%), Positives = 42/98 (42%)
Frame = -2
Query: 378 HVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXXXXXXLTVPLLG 199
H L V GQE + Q+K + +L + ED + L G P LG
Sbjct: 3 HTLKVTGQEMVAQMKAHVASLEGIAPEDQVVLLAGIPLEDEAT---------------LG 47
Query: 198 GKVHGSLARAGKVKGQTPKVEXXXXXXXKTGRAKRRIQ 85
G A GKV+GQ PKV KTGRAKR IQ
Sbjct: 48 --QCGVEAPHGKVRGQAPKVAKQEKQKKKTGRAKRWIQ 83
>UniRef50_UPI0000EB013B Cluster: UPI0000EB013B related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB013B UniRef100
entry - Canis familiaris
Length = 109
Score = 40.3 bits (90), Expect = 0.019
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = -2
Query: 408 MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCG 274
MQL + Q H L+V GQE++ QIK + +L ++ ED + L G
Sbjct: 1 MQLFVWTQELHTLEVTGQETVTQIKTYVASLESIAPEDQVMLLAG 45
>UniRef50_A0CN43 Cluster: Chromosome undetermined scaffold_22, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_22,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 92
Score = 40.3 bits (90), Expect = 0.019
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = -2
Query: 198 GKVHGSLARAGKVKGQTPKVEXXXXXXXK-TGRAKRRI 88
GK+HG+LA+AGKV+ QTPK+E GRA +RI
Sbjct: 2 GKLHGTLAKAGKVRKQTPKIEKQVRRHKIPKGRAYKRI 39
>UniRef50_Q3LW43 Cluster: Ribosomal protein S30; n=1; Bigelowiella
natans|Rep: Ribosomal protein S30 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 55
Score = 38.7 bits (86), Expect = 0.059
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = -2
Query: 198 GKVHGSLARAGKVKGQTPKVEXXXXXXXKTGRAKRRIQVQQKI 70
GKVHGSL RAGKV+ QT + +GRA+ R ++ + I
Sbjct: 2 GKVHGSLTRAGKVRNQTKFIAKSDKKVKNSGRARYRKKMYKLI 44
>UniRef50_UPI0001509BA5 Cluster: Ribosomal protein S30 containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S30 containing protein - Tetrahymena
thermophila SB210
Length = 80
Score = 38.3 bits (85), Expect = 0.077
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = -2
Query: 198 GKVHGSLARAGKVKGQTPKVEXXXX-XXXKTGRAKRRI 88
G++HG+LA+AGKV+ QTPKVE GR+ +RI
Sbjct: 2 GRMHGTLAKAGKVRKQTPKVEKKDKPRKTPKGRSYKRI 39
>UniRef50_UPI00004990C9 Cluster: 40S ribosomal protein S30; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S30 - Entamoeba histolytica HM-1:IMSS
Length = 64
Score = 34.7 bits (76), Expect = 0.95
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -2
Query: 198 GKVHGSLARAGKVKGQTPKVE 136
GKVHG L RAGKV+ QT K E
Sbjct: 2 GKVHGGLTRAGKVRNQTKKPE 22
>UniRef50_A6NDN8 Cluster: Uncharacterized protein ENSP00000310146;
n=4; Euteleostomi|Rep: Uncharacterized protein
ENSP00000310146 - Homo sapiens (Human)
Length = 74
Score = 34.7 bits (76), Expect = 0.95
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -2
Query: 399 HIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAP 268
++R + H L+V G E++ Q K + +L + ED + L G+P
Sbjct: 4 YVRARELHTLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSP 47
>UniRef50_UPI00005A3817 Cluster: PREDICTED: similar to
UBIQUITIN-LIKE PROTEIN FUBI; n=1; Canis lupus
familiaris|Rep: PREDICTED: similar to UBIQUITIN-LIKE
PROTEIN FUBI - Canis familiaris
Length = 166
Score = 34.3 bits (75), Expect = 1.3
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = -2
Query: 411 NMQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAP 268
++QL +R H L+V G E+ IK + +L ED + L G+P
Sbjct: 16 DVQLLVRAWELHTLEVTGLEAFAHIKTHVASLEGHTTEDKVVLLAGSP 63
>UniRef50_Q7XUY7 Cluster: OSJNBb0048E02.10 protein; n=3; Oryza
sativa|Rep: OSJNBb0048E02.10 protein - Oryza sativa
subsp. japonica (Rice)
Length = 423
Score = 34.3 bits (75), Expect = 1.3
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -1
Query: 391 RAIDTRPGRQWPGVHWSDQGTHSYSCCSWR*RPYSIIMWS 272
+A+ RP PG+HW++Q YS CS P I MW+
Sbjct: 368 KAMSMRPDAH-PGIHWNNQWMRGYSDCSHWCLPGPIDMWN 406
>UniRef50_A0RV16 Cluster: Ribosomal protein S30E; n=2;
Thermoprotei|Rep: Ribosomal protein S30E - Cenarchaeum
symbiosum
Length = 60
Score = 34.3 bits (75), Expect = 1.3
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = -2
Query: 189 HGSLARAGKVKGQTPKVE 136
HGSL +AGKV+ QTPK+E
Sbjct: 4 HGSLTKAGKVRSQTPKIE 21
>UniRef50_Q8ZV51 Cluster: Ribosomal protein S30; n=11;
Thermoprotei|Rep: Ribosomal protein S30 - Pyrobaculum
aerophilum
Length = 55
Score = 32.3 bits (70), Expect = 5.1
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -2
Query: 189 HGSLARAGKVKGQTPKV 139
HGSL +AGKV+ QTPK+
Sbjct: 4 HGSLTKAGKVRNQTPKI 20
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 401,218,144
Number of Sequences: 1657284
Number of extensions: 6554216
Number of successful extensions: 16127
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 15822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16122
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23931581955
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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