Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_A01
         (457 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X65923-1|CAA46716.1|  133|Homo sapiens fau protein.                    93   3e-19
X65921-1|CAA46714.1|  133|Homo sapiens fau 1 protein.                  93   3e-19
CR541974-1|CAG46772.1|  133|Homo sapiens FAU protein.                  93   3e-19
BC033877-1|AAH33877.1|  133|Homo sapiens Finkel-Biskis-Reilly mu...    93   3e-19
AY398663-1|AAQ87877.1|  133|Homo sapiens Finkel-Biskis-Reilly mu...    93   3e-19
AK026639-1|BAB15515.1|  133|Homo sapiens protein ( Homo sapiens ...    93   3e-19
X75315-1|CAA53064.1|  230|Homo sapiens SEB4B protein.                  35   0.15 
AK027396-1|BAB55082.1|  171|Homo sapiens protein ( Homo sapiens ...    29   10.0 

>X65923-1|CAA46716.1|  133|Homo sapiens fau protein.
          Length = 133

 Score = 93.5 bits (222), Expect = 3e-19
 Identities = 50/115 (43%), Positives = 64/115 (55%), Gaps = 3/115 (2%)
 Frame = -2

Query: 408 MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXX---X 238
           MQL +R Q  H  +V GQE++ QIK  + +L  +  ED  + L GAP             
Sbjct: 1   MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60

Query: 237 XXXXXXLTVPLLGGKVHGSLARAGKVKGQTPKVEXXXXXXXKTGRAKRRIQVQQK 73
                 +   +LGGKVHGSLARAGKV+GQTPKV        KTGRAKRR+Q  ++
Sbjct: 61  ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRR 115



 Score = 44.4 bits (100), Expect = 2e-04
 Identities = 17/23 (73%), Positives = 22/23 (95%)
 Frame = -3

Query: 86  KYNRRFVNVVQTFGRRRGPNSNS 18
           +YNRRFVNVV TFG+++GPN+NS
Sbjct: 111 QYNRRFVNVVPTFGKKKGPNANS 133


>X65921-1|CAA46714.1|  133|Homo sapiens fau 1 protein.
          Length = 133

 Score = 93.5 bits (222), Expect = 3e-19
 Identities = 50/115 (43%), Positives = 64/115 (55%), Gaps = 3/115 (2%)
 Frame = -2

Query: 408 MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXX---X 238
           MQL +R Q  H  +V GQE++ QIK  + +L  +  ED  + L GAP             
Sbjct: 1   MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60

Query: 237 XXXXXXLTVPLLGGKVHGSLARAGKVKGQTPKVEXXXXXXXKTGRAKRRIQVQQK 73
                 +   +LGGKVHGSLARAGKV+GQTPKV        KTGRAKRR+Q  ++
Sbjct: 61  ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRR 115



 Score = 44.4 bits (100), Expect = 2e-04
 Identities = 17/23 (73%), Positives = 22/23 (95%)
 Frame = -3

Query: 86  KYNRRFVNVVQTFGRRRGPNSNS 18
           +YNRRFVNVV TFG+++GPN+NS
Sbjct: 111 QYNRRFVNVVPTFGKKKGPNANS 133


>CR541974-1|CAG46772.1|  133|Homo sapiens FAU protein.
          Length = 133

 Score = 93.5 bits (222), Expect = 3e-19
 Identities = 50/115 (43%), Positives = 64/115 (55%), Gaps = 3/115 (2%)
 Frame = -2

Query: 408 MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXX---X 238
           MQL +R Q  H  +V GQE++ QIK  + +L  +  ED  + L GAP             
Sbjct: 1   MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60

Query: 237 XXXXXXLTVPLLGGKVHGSLARAGKVKGQTPKVEXXXXXXXKTGRAKRRIQVQQK 73
                 +   +LGGKVHGSLARAGKV+GQTPKV        KTGRAKRR+Q  ++
Sbjct: 61  ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRR 115



 Score = 44.4 bits (100), Expect = 2e-04
 Identities = 17/23 (73%), Positives = 22/23 (95%)
 Frame = -3

Query: 86  KYNRRFVNVVQTFGRRRGPNSNS 18
           +YNRRFVNVV TFG+++GPN+NS
Sbjct: 111 QYNRRFVNVVPTFGKKKGPNANS 133


>BC033877-1|AAH33877.1|  133|Homo sapiens Finkel-Biskis-Reilly
           murine sarcoma virus (FBR-MuSV) ubiquitously expressed
           protein.
          Length = 133

 Score = 93.5 bits (222), Expect = 3e-19
 Identities = 50/115 (43%), Positives = 64/115 (55%), Gaps = 3/115 (2%)
 Frame = -2

Query: 408 MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXX---X 238
           MQL +R Q  H  +V GQE++ QIK  + +L  +  ED  + L GAP             
Sbjct: 1   MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60

Query: 237 XXXXXXLTVPLLGGKVHGSLARAGKVKGQTPKVEXXXXXXXKTGRAKRRIQVQQK 73
                 +   +LGGKVHGSLARAGKV+GQTPKV        KTGRAKRR+Q  ++
Sbjct: 61  ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRR 115



 Score = 44.4 bits (100), Expect = 2e-04
 Identities = 17/23 (73%), Positives = 22/23 (95%)
 Frame = -3

Query: 86  KYNRRFVNVVQTFGRRRGPNSNS 18
           +YNRRFVNVV TFG+++GPN+NS
Sbjct: 111 QYNRRFVNVVPTFGKKKGPNANS 133


>AY398663-1|AAQ87877.1|  133|Homo sapiens Finkel-Biskis-Reilly
           murine sarcoma virus (FBR-MuSV) ubiquitously expressed
           (fo protein.
          Length = 133

 Score = 93.5 bits (222), Expect = 3e-19
 Identities = 50/115 (43%), Positives = 64/115 (55%), Gaps = 3/115 (2%)
 Frame = -2

Query: 408 MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXX---X 238
           MQL +R Q  H  +V GQE++ QIK  + +L  +  ED  + L GAP             
Sbjct: 1   MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60

Query: 237 XXXXXXLTVPLLGGKVHGSLARAGKVKGQTPKVEXXXXXXXKTGRAKRRIQVQQK 73
                 +   +LGGKVHGSLARAGKV+GQTPKV        KTGRAKRR+Q  ++
Sbjct: 61  ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRR 115



 Score = 44.4 bits (100), Expect = 2e-04
 Identities = 17/23 (73%), Positives = 22/23 (95%)
 Frame = -3

Query: 86  KYNRRFVNVVQTFGRRRGPNSNS 18
           +YNRRFVNVV TFG+++GPN+NS
Sbjct: 111 QYNRRFVNVVPTFGKKKGPNANS 133


>AK026639-1|BAB15515.1|  133|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22986 fis, clone KAT11742. ).
          Length = 133

 Score = 93.5 bits (222), Expect = 3e-19
 Identities = 50/115 (43%), Positives = 64/115 (55%), Gaps = 3/115 (2%)
 Frame = -2

Query: 408 MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXX---X 238
           MQL +R Q  H  +V GQE++ QIK  + +L  +  ED  + L GAP             
Sbjct: 1   MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60

Query: 237 XXXXXXLTVPLLGGKVHGSLARAGKVKGQTPKVEXXXXXXXKTGRAKRRIQVQQK 73
                 +   +LGGKVHGSLARAGKV+GQTPKV        KTGRAKRR+Q  ++
Sbjct: 61  ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRR 115



 Score = 44.4 bits (100), Expect = 2e-04
 Identities = 17/23 (73%), Positives = 22/23 (95%)
 Frame = -3

Query: 86  KYNRRFVNVVQTFGRRRGPNSNS 18
           +YNRRFVNVV TFG+++GPN+NS
Sbjct: 111 QYNRRFVNVVPTFGKKKGPNANS 133


>X75315-1|CAA53064.1|  230|Homo sapiens SEB4B protein.
          Length = 230

 Score = 34.7 bits (76), Expect = 0.15
 Identities = 13/18 (72%), Positives = 17/18 (94%)
 Frame = -3

Query: 86 KYNRRFVNVVQTFGRRRG 33
          +YNRRFVNVV TFG+++G
Sbjct: 4  QYNRRFVNVVPTFGKKKG 21


>AK027396-1|BAB55082.1|  171|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14490 fis, clone MAMMA1002886. ).
          Length = 171

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -1

Query: 373 PGRQWPGVHWSDQGTHSY 320
           PG  W G HW  QG  +Y
Sbjct: 55  PGSAWSGDHWDSQGQEAY 72


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,711,870
Number of Sequences: 237096
Number of extensions: 1061975
Number of successful extensions: 6158
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6152
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)