Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_A01
         (457 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071683-1|AAL49305.2|  147|Drosophila melanogaster RH08962p pro...    83   1e-16
AE014297-2878|AAN13838.1|  132|Drosophila melanogaster CG15697-P...    83   1e-16
AE014297-2877|AAF55815.1|  132|Drosophila melanogaster CG15697-P...    83   1e-16
BT011182-1|AAR88543.1|  391|Drosophila melanogaster RE40459p pro...    27   9.1  
AE014134-3322|AAF53949.2|  388|Drosophila melanogaster CG9272-PA...    27   9.1  

>AY071683-1|AAL49305.2|  147|Drosophila melanogaster RH08962p
           protein.
          Length = 147

 Score = 83.4 bits (197), Expect = 1e-16
 Identities = 48/113 (42%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
 Frame = -2

Query: 408 MQLHIRGQST-HVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXX 232
           MQL +RG  T   L+V+   +I  +K ++  +     E+ +L   G              
Sbjct: 16  MQLFVRGLETIEALEVSQDATIAGVKNQLAQIHGFNAEEFSLDCEGITLANETPVTALSS 75

Query: 231 XXXXLTVPLLGGKVHGSLARAGKVKGQTPKVEXXXXXXXKTGRAKRRIQVQQK 73
               L +P+LGGKVHGSLARAGKVKGQTPKVE       KTGRAKRRIQ  ++
Sbjct: 76  FELDLNIPMLGGKVHGSLARAGKVKGQTPKVEKQEKKKKKTGRAKRRIQYNRR 128



 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 19/23 (82%), Positives = 21/23 (91%)
 Frame = -3

Query: 86  KYNRRFVNVVQTFGRRRGPNSNS 18
           +YNRRFVN VQ FGRRRGPN+NS
Sbjct: 124 QYNRRFVNFVQGFGRRRGPNANS 146


>AE014297-2878|AAN13838.1|  132|Drosophila melanogaster CG15697-PB,
           isoform B protein.
          Length = 132

 Score = 83.4 bits (197), Expect = 1e-16
 Identities = 48/113 (42%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
 Frame = -2

Query: 408 MQLHIRGQST-HVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXX 232
           MQL +RG  T   L+V+   +I  +K ++  +     E+ +L   G              
Sbjct: 1   MQLFVRGLETIEALEVSQDATIAGVKNQLAQIHGFNAEEFSLDCEGITLANETPVTALSS 60

Query: 231 XXXXLTVPLLGGKVHGSLARAGKVKGQTPKVEXXXXXXXKTGRAKRRIQVQQK 73
               L +P+LGGKVHGSLARAGKVKGQTPKVE       KTGRAKRRIQ  ++
Sbjct: 61  FELDLNIPMLGGKVHGSLARAGKVKGQTPKVEKQEKKKKKTGRAKRRIQYNRR 113



 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 19/23 (82%), Positives = 21/23 (91%)
 Frame = -3

Query: 86  KYNRRFVNVVQTFGRRRGPNSNS 18
           +YNRRFVN VQ FGRRRGPN+NS
Sbjct: 109 QYNRRFVNFVQGFGRRRGPNANS 131


>AE014297-2877|AAF55815.1|  132|Drosophila melanogaster CG15697-PA,
           isoform A protein.
          Length = 132

 Score = 83.4 bits (197), Expect = 1e-16
 Identities = 48/113 (42%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
 Frame = -2

Query: 408 MQLHIRGQST-HVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXX 232
           MQL +RG  T   L+V+   +I  +K ++  +     E+ +L   G              
Sbjct: 1   MQLFVRGLETIEALEVSQDATIAGVKNQLAQIHGFNAEEFSLDCEGITLANETPVTALSS 60

Query: 231 XXXXLTVPLLGGKVHGSLARAGKVKGQTPKVEXXXXXXXKTGRAKRRIQVQQK 73
               L +P+LGGKVHGSLARAGKVKGQTPKVE       KTGRAKRRIQ  ++
Sbjct: 61  FELDLNIPMLGGKVHGSLARAGKVKGQTPKVEKQEKKKKKTGRAKRRIQYNRR 113



 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 19/23 (82%), Positives = 21/23 (91%)
 Frame = -3

Query: 86  KYNRRFVNVVQTFGRRRGPNSNS 18
           +YNRRFVN VQ FGRRRGPN+NS
Sbjct: 109 QYNRRFVNFVQGFGRRRGPNANS 131


>BT011182-1|AAR88543.1|  391|Drosophila melanogaster RE40459p
           protein.
          Length = 391

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -2

Query: 105 RAKRRIQVQQKICQRCADLRTSSRTQ 28
           R  R   V    C RCADL+  S+TQ
Sbjct: 175 RNSRTAPVDTMGCHRCADLKADSKTQ 200


>AE014134-3322|AAF53949.2|  388|Drosophila melanogaster CG9272-PA
           protein.
          Length = 388

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -2

Query: 105 RAKRRIQVQQKICQRCADLRTSSRTQ 28
           R  R   V    C RCADL+  S+TQ
Sbjct: 170 RNSRTAPVDTMGCHRCADLKADSKTQ 195


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,338,722
Number of Sequences: 53049
Number of extensions: 319867
Number of successful extensions: 747
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1497419784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)