Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_P23
         (527 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    29   0.025
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   2.9  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   2.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   3.8  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   3.8  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    21   6.7  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   6.7  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 29.1 bits (62), Expect = 0.025
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +2

Query: 152 RYKELQKFLQLSEMDEYIDSKYTVLRNM 235
           R+KELQK+L++     Y+ + Y +L  M
Sbjct: 189 RFKELQKYLKIETSCRYVGTLYRILTTM 216


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +3

Query: 312 YQFGYSTRYLFLISISFLTPF 374
           YQ+G  T  LF++ ++ + P+
Sbjct: 168 YQYGTKTYSLFIVFMTVILPY 188


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +3

Query: 312 YQFGYSTRYLFLISISFLTPF 374
           YQ+G  T  LF++ ++ + P+
Sbjct: 168 YQYGTKTYSLFIVFMTVILPY 188


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = +3

Query: 63  NTTCWKCSLELDDDELINIEQWINS 137
           NT   KC++     + + +E W+ S
Sbjct: 138 NTAVLKCNIPSFVADFVRVEAWVGS 162


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +2

Query: 449 IEELVDIANNFEVDSDNIQ 505
           +EEL++IAN + +  D ++
Sbjct: 217 VEELMNIANYYRILGDTVE 235


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 30  KRCQTLI*ETLNTTCWKCS 86
           K+ ++ I E L+T C KC+
Sbjct: 56  KKLKSTIPEALSTDCAKCN 74


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 508 FLNVITIDLKIVGNIDQFFNNAL 440
           FL ++ IDL IVG I +   N L
Sbjct: 57  FLRMVLIDLLIVGCILKHIFNIL 79


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,105
Number of Sequences: 336
Number of extensions: 2362
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12782794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)