Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_P23
         (527 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0415 - 13661745-13664240,13664376-13664401,13665018-136650...    27   7.1  
04_01_0596 - 7852529-7855185,7855545-7855581                           27   7.1  
01_05_0077 + 17928962-17929392,17929472-17929568,17929700-179297...    27   9.3  

>05_03_0415 - 13661745-13664240,13664376-13664401,13665018-13665035,
            13665914-13666181,13666531-13666598,13667102-13667243
          Length = 1005

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -2

Query: 496  ITIDLKIVGNIDQFFNNALNLSRI*DRRTIYSDPSLTEHYQNG 368
            IT +L++ G+    F     +S+I D   +  DPS   H++NG
Sbjct: 958  ITKNLRVCGDCHSAFTY---ISKIVDHEIVVRDPSRFHHFKNG 997


>04_01_0596 - 7852529-7855185,7855545-7855581
          Length = 897

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -2

Query: 496 ITIDLKIVGNIDQFFNNALNLSRI*DRRTIYSDPSLTEHYQNG 368
           IT +L++ G+    F     +S+I D   +  DPS   H++NG
Sbjct: 850 ITKNLRVCGDCHSAFTY---ISKIVDHEIVVRDPSRFHHFKNG 889


>01_05_0077 +
           17928962-17929392,17929472-17929568,17929700-17929747,
           17929833-17929996,17930454-17930469
          Length = 251

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 449 IEELVDIANNFEVDSDNIQELMD 517
           IEE+ D+ NN E D +  ++L D
Sbjct: 211 IEEMADVDNNIESDEEEEEDLFD 233


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,676,953
Number of Sequences: 37544
Number of extensions: 208418
Number of successful extensions: 412
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 412
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1166441080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)