Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_P23
         (527 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z81515-3|CAC42289.2| 1693|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z81515-2|CAB04197.2| 1691|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z77652-2|CAB01113.1|  665|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z70311-10|CAA94377.3|  602|Caenorhabditis elegans Hypothetical p...    27   6.3  
Z54342-16|CAA91156.1|  755|Caenorhabditis elegans Hypothetical p...    27   6.3  
Z47072-4|CAA87370.1|  755|Caenorhabditis elegans Hypothetical pr...    27   6.3  
Z81124-11|CAB03370.2|  306|Caenorhabditis elegans Hypothetical p...    27   8.3  

>Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical
           protein F26H11.2c protein.
          Length = 2266

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +2

Query: 440 ESIIEELVDIANNFEVDSDNIQELMD 517
           E ++E+ VDI++NF+  S N+  + D
Sbjct: 663 EELVEQFVDISDNFDAPSANLWRMGD 688


>Z81515-3|CAC42289.2| 1693|Caenorhabditis elegans Hypothetical
           protein F26H11.2b protein.
          Length = 1693

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +2

Query: 440 ESIIEELVDIANNFEVDSDNIQELMD 517
           E ++E+ VDI++NF+  S N+  + D
Sbjct: 663 EELVEQFVDISDNFDAPSANLWRMGD 688


>Z81515-2|CAB04197.2| 1691|Caenorhabditis elegans Hypothetical
           protein F26H11.2a protein.
          Length = 1691

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +2

Query: 440 ESIIEELVDIANNFEVDSDNIQELMD 517
           E ++E+ VDI++NF+  S N+  + D
Sbjct: 663 EELVEQFVDISDNFDAPSANLWRMGD 688


>Z77652-2|CAB01113.1|  665|Caenorhabditis elegans Hypothetical
           protein C06B3.2 protein.
          Length = 665

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +3

Query: 129 INSRAYKKGIKSYKSFYNFRKWMNISTV-NIPS 224
           I+S++ +K    Y+  Y+F  W N ST+ N+ S
Sbjct: 231 ISSKSIEKSASLYRLLYSFSFWTNASTILNVSS 263


>Z70311-10|CAA94377.3|  602|Caenorhabditis elegans Hypothetical
           protein T25B9.6 protein.
          Length = 602

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +3

Query: 84  SLELDDDELINIEQWINSRAYKKGIKSYKSFYNFRKW 194
           +L  DD  L ++E  + S + ++ ++  K  Y F  W
Sbjct: 385 NLSTDDSNLADLEGELRSASIRRAVEGPKGIYEFGPW 421


>Z54342-16|CAA91156.1|  755|Caenorhabditis elegans Hypothetical
           protein F26C11.1 protein.
          Length = 755

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 11/40 (27%), Positives = 16/40 (40%)
 Frame = +3

Query: 66  TTCWKCSLELDDDELINIEQWINSRAYKKGIKSYKSFYNF 185
           T  WKC     +D +     W N   Y +  ++Y  F  F
Sbjct: 530 TDAWKCQRNWFNDTMYQQLPWYNEDLYNEAQRTYAPFKRF 569


>Z47072-4|CAA87370.1|  755|Caenorhabditis elegans Hypothetical
           protein F26C11.1 protein.
          Length = 755

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 11/40 (27%), Positives = 16/40 (40%)
 Frame = +3

Query: 66  TTCWKCSLELDDDELINIEQWINSRAYKKGIKSYKSFYNF 185
           T  WKC     +D +     W N   Y +  ++Y  F  F
Sbjct: 530 TDAWKCQRNWFNDTMYQQLPWYNEDLYNEAQRTYAPFKRF 569


>Z81124-11|CAB03370.2|  306|Caenorhabditis elegans Hypothetical
           protein T21B4.1 protein.
          Length = 306

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +1

Query: 298 SPTYAINSDIVRGICF*SVLAFSLRFDSVPLMTGPNISYDDLRF 429
           SP Y I     R +CF  ++  S  F +V L   PN++   + +
Sbjct: 40  SPIYPILQHFHRFVCFMLIVILSYPFQTVSLFFWPNMNIQTIYY 83


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,937,802
Number of Sequences: 27780
Number of extensions: 212624
Number of successful extensions: 499
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 499
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)