Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_P21
         (697 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060885-1|AAL28433.1|  112|Drosophila melanogaster GM04427p pro...    50   2e-06
AE013599-3682|AAF47058.1|  112|Drosophila melanogaster CG5532-PA...    50   2e-06
AY089513-1|AAL90251.1|  816|Drosophila melanogaster GH22266p pro...    30   3.5  
AE014296-152|AAF47427.1|  816|Drosophila melanogaster CG13907-PA...    30   3.5  

>AY060885-1|AAL28433.1|  112|Drosophila melanogaster GM04427p
           protein.
          Length = 112

 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 29/71 (40%), Positives = 36/71 (50%)
 Frame = +1

Query: 202 SIPSLGAGIIFGSILGVGAYQLSQDPSNYXXXXXXXXXXXXXXXYRYYNSRKFMPAGLMF 381
           SIPSLGAG+ FG++LG GA+  SQD                    R+  S K MPAG++ 
Sbjct: 27  SIPSLGAGLAFGALLGYGAHLNSQDTPRPLLQLGTSLFLAGLMGARWNRSGKLMPAGMVC 86

Query: 382 CLSVGMFTKLL 414
            LSV    K L
Sbjct: 87  MLSVAALVKNL 97



 Score = 45.6 bits (103), Expect = 6e-05
 Identities = 21/31 (67%), Positives = 24/31 (77%)
 Frame = +3

Query: 111 MGLDIIGFAYAATVAAGGVMGYAKAGYITLL 203
           M +D  G+ YAATVAAGG+MGYAKAG I  L
Sbjct: 1   MPVDWFGYVYAATVAAGGIMGYAKAGSIPSL 31


>AE013599-3682|AAF47058.1|  112|Drosophila melanogaster CG5532-PA
           protein.
          Length = 112

 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 29/71 (40%), Positives = 36/71 (50%)
 Frame = +1

Query: 202 SIPSLGAGIIFGSILGVGAYQLSQDPSNYXXXXXXXXXXXXXXXYRYYNSRKFMPAGLMF 381
           SIPSLGAG+ FG++LG GA+  SQD                    R+  S K MPAG++ 
Sbjct: 27  SIPSLGAGLAFGALLGYGAHLNSQDTPRPLLQLGTSLFLAGLMGARWNRSGKLMPAGMVC 86

Query: 382 CLSVGMFTKLL 414
            LSV    K L
Sbjct: 87  MLSVAALVKNL 97



 Score = 45.6 bits (103), Expect = 6e-05
 Identities = 21/31 (67%), Positives = 24/31 (77%)
 Frame = +3

Query: 111 MGLDIIGFAYAATVAAGGVMGYAKAGYITLL 203
           M +D  G+ YAATVAAGG+MGYAKAG I  L
Sbjct: 1   MPVDWFGYVYAATVAAGGIMGYAKAGSIPSL 31


>AY089513-1|AAL90251.1|  816|Drosophila melanogaster GH22266p
           protein.
          Length = 816

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = +3

Query: 48  NLKQLTSNSL*NQCKLKIIITMGLDIIGFAYAATVAAGGVMGYAKAGYITLLHTI 212
           +L Q+ S  L N C L   I + L  + ++YAA +      G A +GYI+L   I
Sbjct: 630 DLPQVNSLLLNNCCLLVSTIAVTLTPLCYSYAAYITMSIFFGLAISGYISLTSII 684


>AE014296-152|AAF47427.1|  816|Drosophila melanogaster CG13907-PA
           protein.
          Length = 816

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = +3

Query: 48  NLKQLTSNSL*NQCKLKIIITMGLDIIGFAYAATVAAGGVMGYAKAGYITLLHTI 212
           +L Q+ S  L N C L   I + L  + ++YAA +      G A +GYI+L   I
Sbjct: 630 DLPQVNSLLLNNCCLLVSTIAVTLTPLCYSYAAYITMSIFFGLAISGYISLTSII 684


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,246,019
Number of Sequences: 53049
Number of extensions: 526811
Number of successful extensions: 886
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)