Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_P18
(811 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_24678| Best HMM Match : No HMM Matches (HMM E-Value=.) 205 3e-53
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 167 7e-42
SB_24677| Best HMM Match : No HMM Matches (HMM E-Value=.) 165 3e-41
SB_31360| Best HMM Match : No HMM Matches (HMM E-Value=.) 164 9e-41
SB_24676| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 2e-22
SB_51693| Best HMM Match : Pro_isomerase (HMM E-Value=3.5e-19) 95 6e-20
SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23) 85 6e-17
SB_25950| Best HMM Match : Pro_isomerase (HMM E-Value=2.5e-24) 82 6e-16
SB_3070| Best HMM Match : Pro_isomerase (HMM E-Value=2.3e-05) 74 1e-13
SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23) 68 8e-12
SB_23239| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_6440| Best HMM Match : DUF638 (HMM E-Value=6.2) 36 0.039
SB_42464| Best HMM Match : Pro_isomerase (HMM E-Value=3.9e-06) 35 0.090
SB_45173| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.63
SB_21081| Best HMM Match : Pro_isomerase (HMM E-Value=0.11) 32 0.63
SB_30481| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
>SB_24678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 205 bits (501), Expect = 3e-53
Identities = 100/191 (52%), Positives = 123/191 (64%)
Frame = +3
Query: 195 LLFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPE 374
L+F+A +D VT KV D+ IG G +++GLFG T PKT NF LA K +
Sbjct: 8 LVFVAFVNADTETTA-SVTKKVWMDVSIGGQPAGRVILGLFGDTAPKTVANFVALADKEQ 66
Query: 375 GEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAG 554
G GYK S FHRVIKNFMIQ SIYG+ F+DENF LKHYG GWL MANAG
Sbjct: 67 GFGYKDSIFHRVIKNFMIQGGDFTNKDGTGGYSIYGKYFDDENFNLKHYGPGWLCMANAG 126
Query: 555 KDTNGSQFFITTVKTPWLDGRHVVFGKVLXGMDVVQKIEMTVTGANDRPVKDVVISDTKT 734
K+TNGSQF+ITT+KT WLDG H FGKVL GMDVV++IE T +D+P+ +V I+ +
Sbjct: 127 KNTNGSQFYITTIKTSWLDGSHTCFGKVLEGMDVVRRIENTRVDTHDKPLDEVKITGIGS 186
Query: 735 EVVXEPFSVQK 767
+ P+ V K
Sbjct: 187 IPIESPYEVAK 197
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 167 bits (407), Expect = 7e-42
Identities = 85/161 (52%), Positives = 104/161 (64%)
Frame = +3
Query: 243 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNF 422
+V +V FD+ IG+ + G IV+ L VP T ENF L +G GYKGS FHR+I F
Sbjct: 134 RVNPRVFFDITIGERSAGRIVMELRSDVVPMTAENFRCLCTHEKGFGYKGSSFHRIIPQF 193
Query: 423 MIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTP 602
M Q +SIYG +FEDENF LKH GAG LSMAN+G +TNGSQFF+TT KT
Sbjct: 194 MCQGGDFTKHNGTGGKSIYGAKFEDENFVLKHTGAGVLSMANSGPNTNGSQFFLTTEKTD 253
Query: 603 WLDGRHVVFGKVLXGMDVVQKIEMTVTGANDRPVKDVVISD 725
WLDG+HVVFG V+ G DVV+K+E V + + K VVI D
Sbjct: 254 WLDGKHVVFGNVIEGFDVVRKME-AVGSQSGKASKKVVIDD 293
>SB_24677| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 165 bits (402), Expect = 3e-41
Identities = 92/172 (53%), Positives = 110/172 (63%), Gaps = 18/172 (10%)
Frame = +3
Query: 195 LLFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFG-------------KTVPK 335
L F+AS+ + K P VT KV FD+ IG + G I IGLF +++
Sbjct: 12 LFFLASSAA----KDPIVTKKVFFDITIGGEKAGRIEIGLFVIIKTYYLLATRLVESLIG 67
Query: 336 TTENFFQL-----AQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDE 500
T +F + +G GYK S FHRVI++FMIQ +SIYG++F DE
Sbjct: 68 TNFRYFDTYYCCTIESQKGFGYKNSIFHRVIQDFMIQGGDFTKGDGTGGKSIYGQKFADE 127
Query: 501 NFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLXGMDV 656
NFKL+HYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVL GM+V
Sbjct: 128 NFKLQHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLKGMEV 179
>SB_31360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 235
Score = 164 bits (398), Expect = 9e-41
Identities = 88/163 (53%), Positives = 102/163 (62%)
Frame = +3
Query: 240 PKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKN 419
PK T+ FD++IG G IV+ L VPKT ENF L +G GYKGS FHRVI
Sbjct: 2 PKTTY---FDIEIGGAPAGRIVMELRDDVVPKTAENFRALCTGEKGFGYKGSSFHRVIPG 58
Query: 420 FMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKT 599
FM Q +SIYG +F DENF LKH G G LSMANAG TNGSQFF+ T KT
Sbjct: 59 FMCQGGDFTRGDGTGGKSIYGAKFADENFNLKHTGPGILSMANAGPGTNGSQFFLCTAKT 118
Query: 600 PWLDGRHVVFGKVLXGMDVVQKIEMTVTGANDRPVKDVVISDT 728
WLDG+HVVFG V GMDVV+KIE V + + K VVI+D+
Sbjct: 119 SWLDGKHVVFGSVKDGMDVVKKIE-KVGSDSGKTSKKVVIADS 160
>SB_24676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 103 bits (246), Expect = 2e-22
Identities = 50/76 (65%), Positives = 59/76 (77%)
Frame = +3
Query: 540 MANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLXGMDVVQKIEMTVTGANDRPVKDVVI 719
MANAGKDTNGSQFFITTVKT WLDG+HVVFGKVL GMDVV+K+E V PVK +I
Sbjct: 1 MANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKLE-NVNVKGSTPVKTCMI 59
Query: 720 SDTKTEVVXEPFSVQK 767
D+ T + +PF+V+K
Sbjct: 60 DDSGTLPLDKPFNVEK 75
>SB_51693| Best HMM Match : Pro_isomerase (HMM E-Value=3.5e-19)
Length = 99
Score = 95.1 bits (226), Expect = 6e-20
Identities = 47/85 (55%), Positives = 60/85 (70%), Gaps = 2/85 (2%)
Frame = +3
Query: 471 SIYGERFEDENFK-LKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLXG 647
SI+G FEDE + L+H +SMANAG +TNGSQFFIT V TPWLD +H VFG+V+ G
Sbjct: 8 SIWGGEFEDEFHRNLRHDRPYTVSMANAGPNTNGSQFFITVVPTPWLDNKHTVFGRVVKG 67
Query: 648 MDVVQKIEMTVTG-ANDRPVKDVVI 719
MDV Q+I + T ND+P +D+ I
Sbjct: 68 MDVAQQISLVKTNPKNDQPYEDIKI 92
>SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23)
Length = 741
Score = 85.0 bits (201), Expect = 6e-17
Identities = 40/55 (72%), Positives = 46/55 (83%)
Frame = +3
Query: 513 KHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLXGMDVVQKIEMT 677
+H G LSMAN+G +TNGSQFFITTV TP LDGRHVVFGKVL GMDVV+++E T
Sbjct: 188 EHDKPGLLSMANSGPNTNGSQFFITTVPTPHLDGRHVVFGKVLKGMDVVRELEAT 242
>SB_25950| Best HMM Match : Pro_isomerase (HMM E-Value=2.5e-24)
Length = 145
Score = 81.8 bits (193), Expect = 6e-16
Identities = 37/85 (43%), Positives = 56/85 (65%)
Frame = +3
Query: 471 SIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLXGM 650
S+YG FEDE+F + H G + MAN G+ TNGSQF+IT PW+D ++V FG+V+ G+
Sbjct: 51 SVYGPLFEDEDFSVAHNRRGVVGMANKGRHTNGSQFYITLQPAPWMDTKYVAFGQVIEGL 110
Query: 651 DVVQKIEMTVTGANDRPVKDVVISD 725
+V+ +E T N+RP + ++D
Sbjct: 111 NVLDVLEGQET-FNERPKVECRVAD 134
>SB_3070| Best HMM Match : Pro_isomerase (HMM E-Value=2.3e-05)
Length = 49
Score = 74.1 bits (174), Expect = 1e-13
Identities = 33/45 (73%), Positives = 37/45 (82%)
Frame = +3
Query: 534 LSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLXGMDVVQKI 668
LSMANAG TNGSQFF+ T KT WLDG+HVVFG V GMDVV+K+
Sbjct: 3 LSMANAGPGTNGSQFFLCTAKTSWLDGKHVVFGSVKDGMDVVKKM 47
>SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23)
Length = 378
Score = 68.1 bits (159), Expect = 8e-12
Identities = 40/85 (47%), Positives = 50/85 (58%)
Frame = +3
Query: 471 SIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLXGM 650
SIYG F DE F+ KH LSMAN G +TNGSQFFI HVVFG V+ G
Sbjct: 31 SIYGGTFGDECFEFKHERPMLLSMANRGPNTNGSQFFII----------HVVFGHVIQGE 80
Query: 651 DVVQKIEMTVTGANDRPVKDVVISD 725
++V++IE T +RP DV +S+
Sbjct: 81 ELVRQIESLPTNEKNRPNADVKVSN 105
>SB_23239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 54.4 bits (125), Expect = 1e-07
Identities = 48/138 (34%), Positives = 61/138 (44%), Gaps = 6/138 (4%)
Frame = +3
Query: 288 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 467
++G I I L P +T NF LA G Y G++FHRVI FM+Q
Sbjct: 31 SLGEIEIELDADKAPISTANF--LAYVDSGY-YAGTQFHRVIPGFMVQGGGFDADMQQKD 87
Query: 468 RSIYGERFEDENFKLKHYGAGWLSMANAG-KDTNGSQFFITTVKTPWLDGR-----HVVF 629
+ D H G L+MA +D+ SQFFI +LD + VF
Sbjct: 88 TQAPIKNEADNGL---HNVRGTLAMARTQVRDSATSQFFINHKDNAFLDHGSRDFGYAVF 144
Query: 630 GKVLXGMDVVQKIEMTVT 683
GKV+ GMDVV KI T
Sbjct: 145 GKVVKGMDVVDKIAQVPT 162
>SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1651
Score = 47.6 bits (108), Expect = 1e-05
Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Frame = +3
Query: 483 ERFEDENFKL----KHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVL 641
E +DE L H G +SMAN G ++NGSQFFI K P LD ++ +FGK L
Sbjct: 286 EELDDEALDLMGRCNHNARGTVSMANNGPNSNGSQFFICYGKQPHLDMKYTMFGKYL 342
>SB_6440| Best HMM Match : DUF638 (HMM E-Value=6.2)
Length = 175
Score = 35.9 bits (79), Expect = 0.039
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +3
Query: 618 HVVFGKVLXGMDVVQKIEMTVTGANDRPVKDVVISD 725
HVVFG V+ G ++V++IE T +RP DV +S+
Sbjct: 3 HVVFGHVIQGEELVRQIESLPTNEKNRPNADVKVSN 38
>SB_42464| Best HMM Match : Pro_isomerase (HMM E-Value=3.9e-06)
Length = 454
Score = 34.7 bits (76), Expect = 0.090
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = +3
Query: 288 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIK 416
++G I I L+GK PK NF QL EG Y + FHR++K
Sbjct: 11 SVGDIDIELWGKETPKACRNFIQLCL--EGY-YDNTIFHRIVK 50
>SB_45173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 31.9 bits (69), Expect = 0.63
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = -1
Query: 796 TFIINLXSTLFWTLKGSXTTSVFVSDITTSLTGRSFAPVTVISIFCTTSI 647
T II + T+ T+ + TTS+ + I T T S + +I+I TTSI
Sbjct: 195 TIIITILITIIITITITTTTSITIIIIITITTTTSITIIIIITITTTTSI 244
Score = 31.9 bits (69), Expect = 0.63
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = -1
Query: 796 TFIINLXSTLFWTLKGSXTTSVFVSDITTSLTGRSFAPVTVISIFCTTSI 647
T II + T+ T+ + TTS+ + I T T S + +I+I TTSI
Sbjct: 249 TIIITILITIIITITITTTTSITIIIIITITTTTSITIIIIITITTTTSI 298
>SB_21081| Best HMM Match : Pro_isomerase (HMM E-Value=0.11)
Length = 48
Score = 31.9 bits (69), Expect = 0.63
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 8/46 (17%)
Frame = +3
Query: 294 GTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHR 407
G ++ LF VPKT ENF L +G G YKG FHR
Sbjct: 2 GRVLFELFADKVPKTAENFRALCTGEKGIGPSTGKPLHYKGCPFHR 47
>SB_30481| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 207
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/55 (25%), Positives = 23/55 (41%)
Frame = -3
Query: 785 KFXEHSLLDTERFXYNFSFRVRYNNIFDWAIIRTRNSHLNFLYNIHSX*NFTENN 621
K+ E++ YNF + YN ++ N+ N YN ++TE N
Sbjct: 11 KYTENTKYTEYNTEYNFEYNTEYNTEYNTEYNTEYNNEYNTEYNTEYNTDYTEYN 65
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,546,923
Number of Sequences: 59808
Number of extensions: 449129
Number of successful extensions: 934
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2251677692
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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