Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_P17
         (761 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    25   0.87 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.0  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   3.5  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   3.5  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    22   6.1  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   6.1  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   6.1  

>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 510 GSRPLGGTPTPVTNTSLKANPQPSRNFGSG 599
           G+ P  GTPTP+ +    A PQ S  +  G
Sbjct: 309 GASPYSGTPTPMMS---PAPPQDSMGYSMG 335


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 14/47 (29%), Positives = 20/47 (42%)
 Frame = +3

Query: 444  TVQRGGGTWRPSVTPTGSLPRPGSRPLGGTPTPVTNTSLKANPQPSR 584
            T  R   T RP+ T T + P   + P  GT  P     +    +PS+
Sbjct: 1055 TTTRRTTTTRPTTTSTTTRPTTTNWPTQGTTIPPPAVVMPEVDKPSQ 1101


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -3

Query: 594 SRNCATVVGSPSRMCSSPESEYLPED 517
           S +C T   S    C SPE   LP +
Sbjct: 3   SGDCETEEDSAPEACVSPEGSLLPSN 28


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -2

Query: 724 DRVSAI-VLSLYILTGVLYCLFTTLLTVSLPFI 629
           + VS + VL LYIL  +LY +   ++   L FI
Sbjct: 264 NNVSVVYVLILYILESLLYMVTKLVVVTFLKFI 296


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -3

Query: 189 AIIRRSGDHSSLGTVNHQFKTRRATVSK 106
           +IIR +     +   NH++KT+RA   K
Sbjct: 75  SIIRLTPTQVKIWFQNHRYKTKRAQHEK 102


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 636 GNDTVKSVVNKQYNTPVN 689
           G  T KS   K+Y TPVN
Sbjct: 778 GRITQKSCSTKRYVTPVN 795


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +3

Query: 558 LKANPQPSRNFGSGHNNVAKPF 623
           L   P P+  FG GH   + PF
Sbjct: 91  LSGMPMPALGFGLGHPLESVPF 112


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,011
Number of Sequences: 336
Number of extensions: 3766
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)